© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g7383.t1 |
| Gene name | |
| Location | scaffold_23:969..2360 |
| Strand | - |
| Gene length (bp) | 1391 |
| Transcript length (bp) | 1335 |
| Coding sequence length (bp) | 1335 |
| Protein length (aa) | 445 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 7.3E-12 | 91 | 311 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 2.0E-05 | 272 | 366 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 62 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 46 | 68 | 22 |
| 2 | 83 | 105 | 22 |
| 3 | 117 | 136 | 19 |
| 4 | 141 | 163 | 22 |
| 5 | 176 | 198 | 22 |
| 6 | 203 | 225 | 22 |
| 7 | 253 | 275 | 22 |
| 8 | 285 | 307 | 22 |
| 9 | 314 | 336 | 22 |
| 10 | 340 | 362 | 22 |
| 11 | 382 | 401 | 19 |
| 12 | 416 | 438 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g7383.t1 MGSYSPTKETEKGLQASLEGTTDGTHVSNVDYGTQLPPIDGGMNAWLFLAACFVMEALVWGFAFTYGVFQAYYSD IPQFKGSGNIAVVGTCAMGIMYLDLPLVFAAYRQWPKYQRFGCGLGVLLMCAALGLSSLATNTNHLIITQGIFYA LGGSIAYAPCILLMEEWFDRRKGLAFGVMWAGTGIGGVVLPIVMEQLLGKYGFRLTLRGFAVALFILTAPLVYFV KPRVPIADNLPSPPPPNFRFMFTSTFALFEFCNTIEALGFFLPSIYLPTYVRMLGASTSLQALTVILFNLASVVG CVLMGAIIDKLDVTLCILVSTVGSSIGVFLIWGFSMSLAPLFLFSIVYGLFAGSYTSTWPGIMREIVRNQPSAES SMVFACLAAGRGVGNLVSGPLSAALIKGMPWEGDAGYGYGSGYGSLIAFTGVTGVVGGGSYVAKRMKWL* |
| Coding | >Pro_DTO377G3_2|g7383.t1 ATGGGCTCATACTCCCCAACAAAAGAGACTGAAAAGGGGCTTCAAGCTTCGCTAGAGGGGACGACTGACGGTACT CACGTGTCAAATGTTGACTATGGCACGCAACTCCCCCCCATCGATGGCGGAATGAATGCCTGGCTGTTCCTCGCT GCCTGCTTCGTTATGGAGGCTCTCGTCTGGGGATTTGCATTCACGTACGGTGTCTTCCAAGCGTACTACAGCGAT ATCCCCCAATTCAAGGGCTCCGGCAATATCGCCGTCGTCGGAACCTGCGCTATGGGAATCATGTATCTCGACCTC CCTCTTGTCTTTGCCGCCTACCGACAATGGCCCAAATACCAGCGCTTCGGCTGCGGTCTAGGTGTGCTACTAATG TGTGCCGCTCTCGGCCTGAGCTCCCTCGCCACAAATACAAATCACCTTATCATAACTCAAGGAATCTTCTATGCG CTCGGCGGCAGCATCGCCTACGCCCCCTGTATCCTCCTAATGGAAGAGTGGTTCGACCGACGAAAGGGCCTCGCC TTCGGCGTCATGTGGGCCGGCACCGGAATCGGTGGTGTCGTCCTCCCCATCGTCATGGAACAGCTGCTGGGCAAG TACGGGTTCCGGCTTACCTTGCGTGGCTTTGCAGTCGCGTTGTTTATTCTCACTGCGCCGCTGGTCTACTTCGTC AAACCCCGCGTGCCGATCGCAGATAACCTACCCAGTCCGCCACCCCCGAACTTCCGGTTCATGTTTACGTCCACG TTTGCCCTCTTCGAGTTTTGCAATACTATCGAGGCGCTCGGTTTTTTCTTACCATCTATCTACCTCCCAACTTAC GTACGTATGCTCGGTGCCTCGACCTCCCTCCAAGCACTGACTGTTATCCTCTTCAACTTGGCCTCCGTTGTCGGC TGCGTGCTTATGGGCGCTATCATCGACAAACTCGACGTGACGCTTTGCATCCTCGTTTCAACTGTTGGATCCTCT ATCGGCGTTTTCCTCATCTGGGGCTTCTCTATGTCCCTTGCTCCTCTGTTCCTCTTCTCAATCGTATACGGTCTC TTCGCAGGCTCATACACCAGTACCTGGCCTGGCATTATGCGCGAGATAGTCCGTAACCAGCCTTCCGCCGAATCA AGCATGGTCTTTGCCTGTCTTGCAGCCGGGAGAGGTGTCGGAAATTTGGTTTCCGGGCCCCTTAGTGCGGCTCTT ATTAAGGGGATGCCGTGGGAGGGGGACGCAGGGTATGGATATGGGAGTGGATATGGATCCTTGATTGCTTTCACC GGAGTTACAGGCGTTGTGGGTGGGGGAAGTTATGTTGCGAAGCGTATGAAGTGGTTATAG |
| Transcript | >Pro_DTO377G3_2|g7383.t1 ATGGGCTCATACTCCCCAACAAAAGAGACTGAAAAGGGGCTTCAAGCTTCGCTAGAGGGGACGACTGACGGTACT CACGTGTCAAATGTTGACTATGGCACGCAACTCCCCCCCATCGATGGCGGAATGAATGCCTGGCTGTTCCTCGCT GCCTGCTTCGTTATGGAGGCTCTCGTCTGGGGATTTGCATTCACGTACGGTGTCTTCCAAGCGTACTACAGCGAT ATCCCCCAATTCAAGGGCTCCGGCAATATCGCCGTCGTCGGAACCTGCGCTATGGGAATCATGTATCTCGACCTC CCTCTTGTCTTTGCCGCCTACCGACAATGGCCCAAATACCAGCGCTTCGGCTGCGGTCTAGGTGTGCTACTAATG TGTGCCGCTCTCGGCCTGAGCTCCCTCGCCACAAATACAAATCACCTTATCATAACTCAAGGAATCTTCTATGCG CTCGGCGGCAGCATCGCCTACGCCCCCTGTATCCTCCTAATGGAAGAGTGGTTCGACCGACGAAAGGGCCTCGCC TTCGGCGTCATGTGGGCCGGCACCGGAATCGGTGGTGTCGTCCTCCCCATCGTCATGGAACAGCTGCTGGGCAAG TACGGGTTCCGGCTTACCTTGCGTGGCTTTGCAGTCGCGTTGTTTATTCTCACTGCGCCGCTGGTCTACTTCGTC AAACCCCGCGTGCCGATCGCAGATAACCTACCCAGTCCGCCACCCCCGAACTTCCGGTTCATGTTTACGTCCACG TTTGCCCTCTTCGAGTTTTGCAATACTATCGAGGCGCTCGGTTTTTTCTTACCATCTATCTACCTCCCAACTTAC GTACGTATGCTCGGTGCCTCGACCTCCCTCCAAGCACTGACTGTTATCCTCTTCAACTTGGCCTCCGTTGTCGGC TGCGTGCTTATGGGCGCTATCATCGACAAACTCGACGTGACGCTTTGCATCCTCGTTTCAACTGTTGGATCCTCT ATCGGCGTTTTCCTCATCTGGGGCTTCTCTATGTCCCTTGCTCCTCTGTTCCTCTTCTCAATCGTATACGGTCTC TTCGCAGGCTCATACACCAGTACCTGGCCTGGCATTATGCGCGAGATAGTCCGTAACCAGCCTTCCGCCGAATCA AGCATGGTCTTTGCCTGTCTTGCAGCCGGGAGAGGTGTCGGAAATTTGGTTTCCGGGCCCCTTAGTGCGGCTCTT ATTAAGGGGATGCCGTGGGAGGGGGACGCAGGGTATGGATATGGGAGTGGATATGGATCCTTGATTGCTTTCACC GGAGTTACAGGCGTTGTGGGTGGGGGAAGTTATGTTGCGAAGCGTATGAAGTGGTTATAG |
| Gene | >Pro_DTO377G3_2|g7383.t1 ATGGGCTCATACTCCCCAACAAAAGAGACTGAAAAGGGGCTTCAAGCTTCGCTAGAGGGGACGACTGACGGTACT CACGTGTCAAATGTTGACTATGGCACGCAACTCCCCCCCATCGATGGCGGAATGAATGCCTGGCTGTTCCTCGCT GCCTGCTTCGTTATGGAGGCTCTCGTCTGGGGATTTGCATTCACGTACGGTGTCTTCCAAGCGTACTACAGCGAT ATCCCCCAATTCAAGGGCTCCGGCAATATCGCCGTCGTCGGAACCTGCGCTATGGTAAAAATTGAATATCTCATC TTCTAACCCAGCCCGAGCTAACGTACATACTCCAGGGAATCATGTATCTCGACCTCCCTCTTGTCTTTGCCGCCT ACCGACAATGGCCCAAATACCAGCGCTTCGGCTGCGGTCTAGGTGTGCTACTAATGTGTGCCGCTCTCGGCCTGA GCTCCCTCGCCACAAATACAAATCACCTTATCATAACTCAAGGAATCTTCTATGCGCTCGGCGGCAGCATCGCCT ACGCCCCCTGTATCCTCCTAATGGAAGAGTGGTTCGACCGACGAAAGGGCCTCGCCTTCGGCGTCATGTGGGCCG GCACCGGAATCGGTGGTGTCGTCCTCCCCATCGTCATGGAACAGCTGCTGGGCAAGTACGGGTTCCGGCTTACCT TGCGTGGCTTTGCAGTCGCGTTGTTTATTCTCACTGCGCCGCTGGTCTACTTCGTCAAACCCCGCGTGCCGATCG CAGATAACCTACCCAGTCCGCCACCCCCGAACTTCCGGTTCATGTTTACGTCCACGTTTGCCCTCTTCGAGTTTT GCAATACTATCGAGGCGCTCGGTTTTTTCTTACCATCTATCTACCTCCCAACTTACGTACGTATGCTCGGTGCCT CGACCTCCCTCCAAGCACTGACTGTTATCCTCTTCAACTTGGCCTCCGTTGTCGGCTGCGTGCTTATGGGCGCTA TCATCGACAAACTCGACGTGACGCTTTGCATCCTCGTTTCAACTGTTGGATCCTCTATCGGCGTTTTCCTCATCT GGGGCTTCTCTATGTCCCTTGCTCCTCTGTTCCTCTTCTCAATCGTATACGGTCTCTTCGCAGGCTCATACACCA GTACCTGGCCTGGCATTATGCGCGAGATAGTCCGTAACCAGCCTTCCGCCGAATCAAGCATGGTCTTTGCCTGTC TTGCAGCCGGGAGAGGTGTCGGAAATTTGGTTTCCGGGCCCCTTAGTGCGGCTCTTATTAAGGGGATGCCGTGGG AGGGGGACGCAGGGTATGGATATGGGAGTGGATATGGATCCTTGATTGCTTTCACCGGAGTTACAGGCGTTGTGG GTGGGGGAAGTTATGTTGCGAAGCGTATGAAGTGGTTATAG |