Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7350.t1
Gene name
Locationscaffold_22:309049..310116
Strand+
Gene length (bp)1067
Transcript length (bp)744
Coding sequence length (bp)744
Protein length (aa) 248

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14580 LRR_9 Leucine-rich repeat 7.3E-60 2 164
PF13855 LRR_8 Leucine rich repeat 3.7E-07 62 122

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7350.t1
MRLTTELIQSSLTYINPLTDRELDLRGHKIPTIENLGIAKDQDAIDFTDNDISSLGNFPHFPRLRTLLLARNRIN
HIQPALATSVPNLTTLVLTANNVSELADLDPLRNLGRLTHLSLLQNPVTRKENYRYWTIWRIPSVHFLDFQKVTD
AERAAAKELFGTYEEPSSLASKIMGVKSRTFDVSTPAERTPAEKAIRVQLTDKERKRVEKLIREAKSLQEITKLE
KELNEGRIPGGADADGDEAMQM*
Coding >Pro_DTO377G3_2|g7350.t1
ATGCGCTTGACTACTGAGCTCATTCAAAGTTCACTAACTTACATCAATCCGCTCACAGATCGTGAGCTGGATCTC
CGAGGTCATAAGATCCCCACAATCGAGAACTTGGGTATCGCCAAAGATCAAGATGCGATCGATTTCACCGATAAT
GACATCTCCTCCCTTGGAAACTTCCCCCATTTTCCTCGTCTCCGCACTCTCCTTCTTGCGCGCAACCGTATCAAT
CACATCCAACCCGCACTCGCAACTTCAGTGCCCAACCTGACGACTTTGGTCCTAACCGCAAACAATGTGTCTGAA
CTTGCCGACCTCGATCCGCTGCGGAACTTGGGGCGACTGACGCACTTGTCCCTCTTGCAAAACCCGGTGACGCGC
AAGGAGAACTACCGCTACTGGACTATCTGGCGCATTCCCTCTGTCCACTTCCTTGACTTCCAGAAAGTGACCGAC
GCCGAGCGCGCTGCAGCCAAAGAGCTATTCGGCACCTATGAGGAACCCTCGTCCCTCGCATCCAAGATTATGGGT
GTCAAGTCCCGCACCTTCGACGTTTCTACCCCTGCTGAACGCACCCCCGCCGAAAAGGCCATCCGAGTGCAACTC
ACCGACAAGGAGCGCAAGCGGGTCGAGAAATTGATTCGCGAGGCGAAGAGTTTGCAGGAGATTACAAAGTTAGAG
AAGGAGCTCAACGAGGGACGGATACCCGGTGGAGCGGATGCCGATGGTGACGAGGCCATGCAGATGTGA
Transcript >Pro_DTO377G3_2|g7350.t1
ATGCGCTTGACTACTGAGCTCATTCAAAGTTCACTAACTTACATCAATCCGCTCACAGATCGTGAGCTGGATCTC
CGAGGTCATAAGATCCCCACAATCGAGAACTTGGGTATCGCCAAAGATCAAGATGCGATCGATTTCACCGATAAT
GACATCTCCTCCCTTGGAAACTTCCCCCATTTTCCTCGTCTCCGCACTCTCCTTCTTGCGCGCAACCGTATCAAT
CACATCCAACCCGCACTCGCAACTTCAGTGCCCAACCTGACGACTTTGGTCCTAACCGCAAACAATGTGTCTGAA
CTTGCCGACCTCGATCCGCTGCGGAACTTGGGGCGACTGACGCACTTGTCCCTCTTGCAAAACCCGGTGACGCGC
AAGGAGAACTACCGCTACTGGACTATCTGGCGCATTCCCTCTGTCCACTTCCTTGACTTCCAGAAAGTGACCGAC
GCCGAGCGCGCTGCAGCCAAAGAGCTATTCGGCACCTATGAGGAACCCTCGTCCCTCGCATCCAAGATTATGGGT
GTCAAGTCCCGCACCTTCGACGTTTCTACCCCTGCTGAACGCACCCCCGCCGAAAAGGCCATCCGAGTGCAACTC
ACCGACAAGGAGCGCAAGCGGGTCGAGAAATTGATTCGCGAGGCGAAGAGTTTGCAGGAGATTACAAAGTTAGAG
AAGGAGCTCAACGAGGGACGGATACCCGGTGGAGCGGATGCCGATGGTGACGAGGCCATGCAGATGTGA
Gene >Pro_DTO377G3_2|g7350.t1
ATGCGCTTGACTACTGAGCTCATTCAAAGTTCACTAACTTACATCAATCCGCTCACAGATCGTGAGCTGGATCTC
CGAGGTGAGTTCACCCACTATAGACCTGCCTGAAAAGAACAGGTACTACACTTTTGATTAAGAGCTGGATTGATA
TCGTCTTTTGCGTGGTCGTGCAGGTCATAAGATCCCCACAATCGAGAACTTGGGTATCGCCAAAGTAAGTGCTTT
GTTTCTTTCAATCTTTGAGAGGCAGATTTGTCCCTGTTACTTCTTTCCGTGTTACTACTAGACCAATTTCTGGTC
TGCAGTTAGCTCTGTTGTACCTATATGAATCCAATGTTGACAGCTCCTAGGATCAAGATGCGATCGATTTCACCG
ATAATGACATCTCCTCCCTTGGAAACTTCCCCCATTTTCCTCGTCTCCGCACTCTCCTTCTTGCGCGCAACCGTA
TCAATCACATCCAACCCGCACTCGCAACTTCAGTGCCCAACCTGACGACTTTGGTCCTAACCGCAAACAATGTGT
CTGAACTTGCCGACCTCGATCCGCTGCGGAACTTGGGGCGACTGACGCACTTGTCCCTCTTGCAAAACCCGGTGA
CGCGCAAGGAGGTATGTTTAGCCCTGCGCCGTATACTAGTTAGATCCGGCTATATATGACATGGTCCAGACTCAA
TTGGAAGCTAAACTAACCGATTCCTGCAGAACTACCGCTACTGGACTATCTGGCGCATTCCCTCTGTCCACTTCC
TTGACTTCCAGAAAGTGACCGACGCCGAGCGCGCTGCAGCCAAAGAGCTATTCGGCACCTATGAGGAACCCTCGT
CCCTCGCATCCAAGATTATGGGTGTCAAGTCCCGCACCTTCGACGTTTCTACCCCTGCTGAACGCACCCCCGCCG
AAAAGGCCATCCGAGTGCAACTCACCGACAAGGAGCGCAAGCGGGTCGAGAAATTGATTCGCGAGGCGAAGAGTT
TGCAGGAGATTACAAAGTTAGAGAAGGAGCTCAACGAGGGACGGATACCCGGTGGAGCGGATGCCGATGGTGACG
AGGCCATGCAGATGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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