Protein ID | Pro_DTO377G3_2|g7325.t1 |
Gene name | |
Location | scaffold_22:234939..236667 |
Strand | + |
Gene length (bp) | 1728 |
Transcript length (bp) | 1548 |
Coding sequence length (bp) | 1548 |
Protein length (aa) | 516 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00085 | Thioredoxin | Thioredoxin | 9.2E-31 | 32 | 132 |
PF00085 | Thioredoxin | Thioredoxin | 1.8E-26 | 366 | 472 |
PF13848 | Thioredoxin_6 | Thioredoxin-like domain | 2.1E-06 | 68 | 159 |
PF13848 | Thioredoxin_6 | Thioredoxin-like domain | 8.5E-32 | 165 | 343 |
PF01216 | Calsequestrin | Calsequestrin | 1.4E-12 | 70 | 247 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005509 | calcium ion binding | Yes |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
GO:0046872 | metal ion binding | No |
GO:0043169 | cation binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 20 | 0.999312 |
Orthofinder run ID | 2 |
Orthogroup | 4154 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g7325.t1 MRSFAPLVLSLLGATAAVHAAEPEVADTDANVVTLTTETFDEFVKEHPLVLAEFYAPWCGHCKALAPHYEEAATE LKAKDIPVIKVDCTVEEELCRTYEVDGYPTLKVFRGPDAHKPYAGARKSDAIISYMTKQSMPAVSNVNEENLEEF KALDKIVIIGYVASDDSASNKSFTSFAESQRDNFLFAASNDAALAKAEGAKQPSIVLYKEFDEKVAVYDGKLEEE AILEWVKTASTPLVGELGPETYSKYMAAGIPLAYIFAETPEEREQLAADFRPIAENHRGAINIVTLDAKLFGAHA GNLNLEPEKFPAFAIQDTTKNAKYPYDQTKKVDAKDIGKFIKDVLEGKVEPSLKSEPIPETQEGSVTVVVGRNYQ EVVVDNEKDVLVEFYAPWCGHCKSLAPKYEELAALYADVPELNEKVTVAKVDATANDVPDSITGFPTIKLYPAGA KDSPIEYSGSRTVEDLVAFIKENGKYQADGLADGSKKPEERAEVTSAPKATESPASDEKDIHDEL* |
Coding | >Pro_DTO377G3_2|g7325.t1 ATGCGGTCTTTCGCCCCTCTGGTCCTGAGCCTTCTCGGAGCTACTGCGGCAGTCCACGCTGCTGAGCCTGAAGTT GCCGACACTGACGCCAATGTCGTCACCTTGACAACCGAAACCTTTGATGAATTCGTCAAGGAGCACCCTTTGGTG CTTGCTGAGTTCTATGCGCCTTGGTGCGGTCACTGCAAGGCCCTTGCACCCCATTATGAGGAGGCTGCCACAGAG CTGAAGGCCAAGGATATCCCCGTGATCAAGGTGGATTGCACCGTGGAAGAGGAGCTCTGCCGAACCTACGAAGTT GATGGCTACCCTACTCTGAAGGTATTCCGTGGCCCCGATGCACACAAGCCCTACGCTGGTGCCCGCAAGTCCGAC GCAATCATTTCATACATGACCAAGCAGTCTATGCCCGCCGTCTCGAACGTGAACGAGGAGAACCTAGAGGAATTC AAGGCCTTGGACAAGATTGTTATTATTGGATACGTGGCTTCTGACGACAGCGCCTCCAACAAGAGCTTCACTTCG TTCGCTGAATCCCAGCGTGACAACTTCCTCTTCGCTGCCTCCAACGATGCTGCTCTCGCTAAGGCCGAGGGCGCC AAGCAGCCCTCGATTGTTCTCTACAAGGAATTCGATGAGAAGGTGGCCGTTTACGACGGAAAGCTGGAGGAAGAG GCCATCCTTGAATGGGTCAAGACCGCTAGTACTCCTCTTGTTGGCGAGCTTGGTCCCGAGACTTACTCAAAGTAC ATGGCGGCCGGTATTCCCCTGGCTTACATCTTTGCCGAGACTCCCGAGGAGCGCGAGCAGCTCGCTGCTGATTTC CGTCCCATCGCTGAGAACCACCGTGGAGCTATCAACATTGTTACCCTTGATGCTAAGCTCTTCGGCGCTCACGCC GGCAACCTTAACCTTGAGCCCGAGAAGTTCCCTGCTTTCGCTATCCAGGACACTACTAAGAACGCCAAGTACCCT TACGATCAGACTAAGAAGGTTGATGCCAAGGATATCGGCAAGTTCATCAAGGATGTCCTTGAGGGCAAGGTTGAG CCTAGCCTCAAGTCCGAGCCCATTCCCGAGACTCAGGAGGGATCTGTTACTGTTGTTGTTGGCCGCAACTACCAG GAGGTTGTCGTTGATAACGAAAAGGATGTGCTGGTCGAGTTCTACGCTCCCTGGTGCGGACACTGCAAGTCTCTT GCTCCCAAGTACGAAGAGCTTGCTGCGTTGTATGCCGATGTCCCCGAGTTGAATGAGAAGGTCACTGTCGCCAAA GTCGACGCCACTGCCAACGATGTGCCAGATTCCATCACTGGCTTCCCCACCATCAAGCTCTACCCCGCTGGTGCT AAGGACTCACCTATTGAGTACTCTGGTTCCCGTACCGTGGAGGACCTAGTCGCCTTCATCAAGGAGAACGGCAAG TATCAGGCGGACGGCCTGGCCGATGGCTCCAAGAAGCCCGAGGAGCGTGCCGAGGTCACTTCGGCCCCCAAGGCC ACCGAGTCTCCCGCATCCGATGAGAAGGATATTCATGACGAGCTTTAA |
Transcript | >Pro_DTO377G3_2|g7325.t1 ATGCGGTCTTTCGCCCCTCTGGTCCTGAGCCTTCTCGGAGCTACTGCGGCAGTCCACGCTGCTGAGCCTGAAGTT GCCGACACTGACGCCAATGTCGTCACCTTGACAACCGAAACCTTTGATGAATTCGTCAAGGAGCACCCTTTGGTG CTTGCTGAGTTCTATGCGCCTTGGTGCGGTCACTGCAAGGCCCTTGCACCCCATTATGAGGAGGCTGCCACAGAG CTGAAGGCCAAGGATATCCCCGTGATCAAGGTGGATTGCACCGTGGAAGAGGAGCTCTGCCGAACCTACGAAGTT GATGGCTACCCTACTCTGAAGGTATTCCGTGGCCCCGATGCACACAAGCCCTACGCTGGTGCCCGCAAGTCCGAC GCAATCATTTCATACATGACCAAGCAGTCTATGCCCGCCGTCTCGAACGTGAACGAGGAGAACCTAGAGGAATTC AAGGCCTTGGACAAGATTGTTATTATTGGATACGTGGCTTCTGACGACAGCGCCTCCAACAAGAGCTTCACTTCG TTCGCTGAATCCCAGCGTGACAACTTCCTCTTCGCTGCCTCCAACGATGCTGCTCTCGCTAAGGCCGAGGGCGCC AAGCAGCCCTCGATTGTTCTCTACAAGGAATTCGATGAGAAGGTGGCCGTTTACGACGGAAAGCTGGAGGAAGAG GCCATCCTTGAATGGGTCAAGACCGCTAGTACTCCTCTTGTTGGCGAGCTTGGTCCCGAGACTTACTCAAAGTAC ATGGCGGCCGGTATTCCCCTGGCTTACATCTTTGCCGAGACTCCCGAGGAGCGCGAGCAGCTCGCTGCTGATTTC CGTCCCATCGCTGAGAACCACCGTGGAGCTATCAACATTGTTACCCTTGATGCTAAGCTCTTCGGCGCTCACGCC GGCAACCTTAACCTTGAGCCCGAGAAGTTCCCTGCTTTCGCTATCCAGGACACTACTAAGAACGCCAAGTACCCT TACGATCAGACTAAGAAGGTTGATGCCAAGGATATCGGCAAGTTCATCAAGGATGTCCTTGAGGGCAAGGTTGAG CCTAGCCTCAAGTCCGAGCCCATTCCCGAGACTCAGGAGGGATCTGTTACTGTTGTTGTTGGCCGCAACTACCAG GAGGTTGTCGTTGATAACGAAAAGGATGTGCTGGTCGAGTTCTACGCTCCCTGGTGCGGACACTGCAAGTCTCTT GCTCCCAAGTACGAAGAGCTTGCTGCGTTGTATGCCGATGTCCCCGAGTTGAATGAGAAGGTCACTGTCGCCAAA GTCGACGCCACTGCCAACGATGTGCCAGATTCCATCACTGGCTTCCCCACCATCAAGCTCTACCCCGCTGGTGCT AAGGACTCACCTATTGAGTACTCTGGTTCCCGTACCGTGGAGGACCTAGTCGCCTTCATCAAGGAGAACGGCAAG TATCAGGCGGACGGCCTGGCCGATGGCTCCAAGAAGCCCGAGGAGCGTGCCGAGGTCACTTCGGCCCCCAAGGCC ACCGAGTCTCCCGCATCCGATGAGAAGGATATTCATGACGAGCTTTAA |
Gene | >Pro_DTO377G3_2|g7325.t1 ATGCGGTCTTTCGCCCCTCTGGTCCTGAGCCTTCTCGGAGCTACTGCGGCAGTCCACGCTGCTGAGCCTGAAGTT GCCGACACTGACGCCAATGTCGTCACCTTGACAACCGAAACCTTTGATGAATTCGTCAAGGAGCACCCTTTGGTG CTTGCTGAGTTCTATGCGCCTTGGTGCGGTCACTGCAAGGCCCTTGCACCCCATTATGAGGAGGCTGCCACAGAG CTGAAGGCCAAGGATATCCCCGTGATCAAGGTGGATTGCACCGTGGAAGAGGAGCTCTGCCGAACCTACGAAGTT GATGGCTACCCTACTCTGAAGGTATTCCGTGGCCCCGATGCACACAAGCCCTACGCTGGTGCCCGCAAGTCCGAC GCGTAAGTCATTCTAGGTTTCGGGTTCTTGTGCTCTGGAAATTAACGCGTTTCCTCGATAGAATCATTTCATACA TGACCAAGCAGTCTATGCCCGCCGTCTCGAACGTGAACGAGGAGAACCTAGAGGAATTCAAGGCCTTGGACAAGA TTGTTATTATTGGATACGTGGCTTCTGACGACAGCGCCTCCAACAAGAGCTTCACTTCGTTCGCTGAATCCCAGC GTGACAACTTCCTCTTCGCTGCCTCCAACGATGCTGCTCTCGCTAAGGCCGAGGGCGCCAAGCAGCCCTCGATTG TTCTCTACAAGGAATTCGATGAGAAGGTGGCCGTTTACGACGGAAAGCTGGAGGAAGAGGCCATCCTTGAATGGG TCAAGACCGCTAGTACTCCTCTTGTTGGCGAGCTTGGTCCCGAGACTTACTCAAAGTACATGGCGGTATGTCTAA CTTCTTCTGTCCTCGTATTTGAGCAAGAAAAGAAACTGACTTTCTACAACGATTAGGCCGGTATTCCCCTGGCTT ACATCTTTGCCGAGACTCCCGAGGAGCGCGAGCAGCTCGCTGCTGATTTCCGTCCCATCGCTGAGAACCACCGTG GAGCTATCAACATTGTTACCCTTGATGCTAAGCTCTTCGGCGCTCACGCCGGCAACCTTAACCTTGAGCCCGAGA AGTTCCCTGCTTTCGCTATCCAGGACACTACTAAGAACGCCAAGTACCCTTACGATCAGACTAAGAAGGTTGATG CCAAGGATATCGGCAAGTTCATCAAGGATGTCCTTGAGGGCAAGGTTGAGCCTAGCCTCAAGTCCGAGCCCATTC CCGAGACTCAGGAGGGATCTGTTACTGTTGTTGTTGGCCGCAACTACCAGGAGGTTGTCGTTGATAACGAAAAGG ATGTGCTGGTCGAGTTCTACGCTCCCTGGTGCGGACACTGCAAGTCGTAAGTTTTTCACACCTCATCTACCATTT GTCGCATGTCTAACTCATCATCACAGTCTTGCTCCCAAGTACGAAGAGCTTGCTGCGTTGTATGCCGATGTCCCC GAGTTGAATGAGAAGGTCACTGTCGCCAAAGTCGACGCCACTGCCAACGATGTGCCAGATTCCATCACTGGCTTC CCCACCATCAAGCTCTACCCCGCTGGTGCTAAGGACTCACCTATTGAGTACTCTGGTTCCCGTACCGTGGAGGAC CTAGTCGCCTTCATCAAGGAGAACGGCAAGTATCAGGCGGACGGCCTGGCCGATGGCTCCAAGAAGCCCGAGGAG CGTGCCGAGGTCACTTCGGCCCCCAAGGCCACCGAGTCTCCCGCATCCGATGAGAAGGATATTCATGACGAGCTT TAA |