Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7277.t1
Gene name
Locationscaffold_22:109688..111011
Strand+
Gene length (bp)1323
Transcript length (bp)1074
Coding sequence length (bp)1074
Protein length (aa) 358

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 4.8E-07 56 92
PF00400 WD40 WD domain, G-beta repeat 2.4E-02 101 135
PF00400 WD40 WD domain, G-beta repeat 7.1E-05 144 178
PF00400 WD40 WD domain, G-beta repeat 1.0E-04 227 261
PF00400 WD40 WD domain, G-beta repeat 7.8E-02 272 310
PF00400 WD40 WD domain, G-beta repeat 1.0E-02 315 352

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7277.t1
MSGEKRPAPEGFGTSHQLVVKRNKAAENAGTELVKGSSQNGALIQSVPRTSGLDAPIMELTGHSGEVFAVRFDPT
AQHIASGSMDRSILLWNTYGQCENYGQLTGHRGAVLDLQWSRDSRALFSASADMTLGSWDVETGERVRRHVGHEE
IINCLDISKRGQELLVSGSDDGSIGIWDPRQKDALDYLQTELPITAVALSEAGNEIYSGGIDNTIHAWDIRKKAI
VYSMAGHTDTITSLQISPDSQTLLSNSHDSTVRTWDIRPFAPTNRQVKTYDGAPVGLEKNLIRASWDPKGEKIAA
GSGDRSVVVWETKTGKLLYKLPGHKGTVNDVRFSPNDEPIIVSCSSDRNLMLGELGK*
Coding >Pro_DTO377G3_2|g7277.t1
ATGTCTGGTGAAAAGCGCCCTGCTCCAGAGGGCTTCGGGACCTCGCACCAGCTCGTGGTCAAGCGAAACAAGGCC
GCCGAAAACGCAGGAACCGAGCTTGTGAAGGGCTCTTCCCAAAATGGAGCTCTCATTCAATCTGTTCCTCGCACA
AGTGGTTTGGATGCTCCTATCATGGAACTCACAGGTCACTCTGGTGAAGTCTTTGCAGTCCGATTCGATCCTACC
GCGCAACATATCGCATCTGGATCCATGGATCGTTCTATCTTACTGTGGAATACATATGGACAATGCGAAAACTAC
GGCCAATTGACAGGTCACCGAGGAGCTGTGCTGGATCTTCAGTGGTCGCGCGATTCGCGGGCACTATTCTCAGCA
TCCGCAGACATGACCCTTGGAAGCTGGGATGTGGAGACCGGAGAACGAGTACGCCGTCACGTGGGGCATGAGGAG
ATCATCAACTGCCTCGATATCAGCAAAAGAGGACAGGAACTTTTGGTCAGTGGTAGTGATGATGGGTCCATCGGC
ATCTGGGATCCTCGGCAGAAGGATGCTCTGGACTACCTCCAGACCGAACTCCCCATTACCGCTGTAGCATTGTCC
GAAGCGGGTAATGAGATCTACAGTGGAGGTATTGACAATACAATTCACGCCTGGGATATTCGGAAGAAGGCCATA
GTCTACTCGATGGCCGGACATACAGATACCATCACATCACTACAAATCTCGCCAGACTCACAGACTTTGCTGTCA
AACTCTCATGACTCCACTGTTCGCACATGGGACATTCGTCCCTTCGCCCCTACCAACCGGCAAGTGAAGACCTAC
GATGGTGCTCCTGTCGGGCTAGAGAAGAACCTCATCCGTGCCAGCTGGGATCCCAAGGGTGAGAAGATTGCTGCA
GGCAGTGGTGATCGAAGTGTGGTCGTCTGGGAGACCAAAACTGGTAAATTGCTGTATAAGCTTCCCGGTCACAAG
GGCACTGTCAATGACGTGCGCTTCTCTCCCAATGATGAGCCAATCATCGTTTCTTGCTCCTCCGACCGGAACCTG
ATGCTTGGAGAGCTTGGCAAATAA
Transcript >Pro_DTO377G3_2|g7277.t1
ATGTCTGGTGAAAAGCGCCCTGCTCCAGAGGGCTTCGGGACCTCGCACCAGCTCGTGGTCAAGCGAAACAAGGCC
GCCGAAAACGCAGGAACCGAGCTTGTGAAGGGCTCTTCCCAAAATGGAGCTCTCATTCAATCTGTTCCTCGCACA
AGTGGTTTGGATGCTCCTATCATGGAACTCACAGGTCACTCTGGTGAAGTCTTTGCAGTCCGATTCGATCCTACC
GCGCAACATATCGCATCTGGATCCATGGATCGTTCTATCTTACTGTGGAATACATATGGACAATGCGAAAACTAC
GGCCAATTGACAGGTCACCGAGGAGCTGTGCTGGATCTTCAGTGGTCGCGCGATTCGCGGGCACTATTCTCAGCA
TCCGCAGACATGACCCTTGGAAGCTGGGATGTGGAGACCGGAGAACGAGTACGCCGTCACGTGGGGCATGAGGAG
ATCATCAACTGCCTCGATATCAGCAAAAGAGGACAGGAACTTTTGGTCAGTGGTAGTGATGATGGGTCCATCGGC
ATCTGGGATCCTCGGCAGAAGGATGCTCTGGACTACCTCCAGACCGAACTCCCCATTACCGCTGTAGCATTGTCC
GAAGCGGGTAATGAGATCTACAGTGGAGGTATTGACAATACAATTCACGCCTGGGATATTCGGAAGAAGGCCATA
GTCTACTCGATGGCCGGACATACAGATACCATCACATCACTACAAATCTCGCCAGACTCACAGACTTTGCTGTCA
AACTCTCATGACTCCACTGTTCGCACATGGGACATTCGTCCCTTCGCCCCTACCAACCGGCAAGTGAAGACCTAC
GATGGTGCTCCTGTCGGGCTAGAGAAGAACCTCATCCGTGCCAGCTGGGATCCCAAGGGTGAGAAGATTGCTGCA
GGCAGTGGTGATCGAAGTGTGGTCGTCTGGGAGACCAAAACTGGTAAATTGCTGTATAAGCTTCCCGGTCACAAG
GGCACTGTCAATGACGTGCGCTTCTCTCCCAATGATGAGCCAATCATCGTTTCTTGCTCCTCCGACCGGAACCTG
ATGCTTGGAGAGCTTGGCAAATAA
Gene >Pro_DTO377G3_2|g7277.t1
ATGTCTGGTGAAAAGCGCCCTGCTCCAGAGGGCTTCGGGACCTCGCACCAGCTCGTGGTCAAGCGAAACAAGGCC
GCCGAAAACGCAGGAACCGAGCTTGTGAAGGGCTCTTCCCAAAATGGAGCTCTCATTCAATCTGTATGCGCCAAG
TCTGCCTTCGAAGCTCAACGGGCTTTCACGGAGAATAGCCAGCTAATTTTAATATACAGGTTCCTCGCACAAGTG
GTTTGGATGCTCCTATCATGGAACTCACAGGTAAGACTCTGTCGCCAATTTGTCGCTATAACACGCGCTAATAAA
AGGAACCTACTAGGTCACTCTGGTGAAGTCTTTGCAGTCCGATTCGATCCTACCGCGCAACATATCGCATCTGGA
TCCATGGATCGTTCTATCTGTATGTCCTCGTCTTGATCCGGGAATGCGGCCGCCGAATACGTTACTGATGGAGAT
TCCTTGAATAGTACTGTGGAATACATATGGACAATGCGAAAACTACGGCCAATTGACAGGTCACCGAGGAGCTGT
GCTGGATCTTCAGTGGTCGCGCGATTCGCGGGCACTATTCTCAGCATCCGCAGACATGACCCTTGGAAGCTGGGA
TGTGGAGACCGGAGAACGAGTACGCCGTCACGTGGGGCATGAGGAGATCATCAACTGCCTCGATATCAGCAAAAG
AGGACAGGAACTTTTGGTCAGTGGTAGTGATGATGGGTCCATCGGCATCTGGGATCCTCGGCAGAAGGATGCTCT
GGACTACCTCCAGACCGAACTCCCCATTACCGCTGTAGCATTGTCCGAAGCGGGTAATGAGATCTACAGTGGAGG
TATTGACAATACAATTCACGCCTGGGATATTCGGAAGAAGGCCATAGTCTACTCGATGGCCGGACATACAGATAC
CATCACATCACTACAAATCTCGCCAGACTCACAGACTTTGCTGTCAAACTCTCATGACTCCACTGTTCGCACATG
GGACATTCGTCCCTTCGCCCCTACCAACCGGCAAGTGAAGACCTACGATGGTGCTCCTGTCGGGCTAGAGAAGAA
CCTCATCCGTGCCAGCTGGGATCCCAAGGGTGAGAAGATTGCTGCAGGCAGTGGTGATCGAAGTGTGGTCGTCTG
GGAGACCAAAACTGGTAAATTGCTGTATAAGCTTCCCGGTCACAAGGGCACTGTCAATGACGTGCGCTTCTCTCC
CAATGATGAGCCAATCAGTGAGTATATACCCTGTTTGCAAGCAAATCCACAATTTCTAACAAGGTCACAGTCGTT
TCTTGCTCCTCCGACCGGAACCTGATGCTTGGAGAGCTTGGCAAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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