Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g7266.t1
Gene name
Location	scaffold_22:81918..83430
Strand	+
Gene length (bp)	1512
Transcript length (bp)	1335
Coding sequence length (bp)	1335
Protein length (aa)	445

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00160	Pro_isomerase	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	5.8E-36	5	171
PF00076	RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	7.8E-14	250	320

GO

GO Term	Description	Terminal node
GO:0003723	RNA binding	Yes
GO:0000413	protein peptidyl-prolyl isomerization	Yes
GO:0003755	peptidyl-prolyl cis-trans isomerase activity	Yes
GO:0018208	peptidyl-proline modification	No
GO:0043170	macromolecule metabolic process	No
GO:0140096	catalytic activity, acting on a protein	No
GO:0019538	protein metabolic process	No
GO:0008150	biological_process	No
GO:0036211	protein modification process	No
GO:0071704	organic substance metabolic process	No
GO:0003676	nucleic acid binding	No
GO:0008152	metabolic process	No
GO:0005488	binding	No
GO:0003824	catalytic activity	No
GO:0003674	molecular_function	No
GO:0043412	macromolecule modification	No
GO:0006807	nitrogen compound metabolic process	No
GO:0097159	organic cyclic compound binding	No
GO:0016853	isomerase activity	No
GO:1901363	heterocyclic compound binding	No
GO:0018193	peptidyl-amino acid modification	No
GO:0016859	cis-trans isomerase activity	No
GO:1901564	organonitrogen compound metabolic process	No
GO:0044238	primary metabolic process	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g7266.t1 MSALLETSLGDIVIDLLVDDAPKACDNFLKLCKLKYYNFSPIHSVQKNFTFQTGDPLGPDAPESDGGSSVWGLLD GPSKRTFPLQASRTLKHLERGTVSMATVPAKNDPDQRLAASQFIITLGDNLDYLDGKAVIFGKVVEGFDVLEKIN ESFIDDRGRPLKDIRIRHTTVLDDPFDDPPNLVEPPESPVPSKAQLATVRIADDEDLDDDMDEEAMDKLRREREA RAQALTLEMVGDLPFADVKPPENILFVCKLNPVTQDEDLNLIFSRFGTILSCEVIRDKRTGDSLQYAFIEFEEQK ACEQAYFKMQGVLIDDHRIHVDFSQSVSKLSESWRNSTVTKRRQRGGFGGVADLEAKRQYRELDEAPIDEDDARY LFDKRNKNRGAPAPPREAPSDRTRGRRDRGSRSPRREQDRYRRRSYSRSPQRDSRRDSRKERSYNHRGR*
Coding	>Pro_DTO377G3_2\|g7266.t1 ATGAGCGCGCTCTTAGAGACCTCCCTAGGCGACATTGTAATTGACCTGTTGGTCGATGATGCACCCAAGGCGTGT GACAACTTCTTGAAGCTATGCAAGCTCAAGTACTACAATTTCTCGCCCATCCATAGCGTCCAAAAGAACTTCACC TTCCAGACCGGCGACCCGCTCGGCCCTGATGCACCTGAGAGTGATGGAGGATCTTCGGTTTGGGGTCTGCTGGAT GGACCGTCGAAAAGAACATTTCCGCTCCAGGCGTCGCGCACGTTGAAACACTTGGAGCGCGGCACGGTGAGTATG GCGACGGTACCGGCGAAGAACGACCCCGACCAACGGCTAGCCGCCAGTCAATTCATCATTACACTTGGAGACAAT CTAGATTATTTAGATGGCAAGGCCGTGATTTTCGGCAAGGTCGTCGAGGGCTTCGATGTCCTAGAGAAAATCAAT GAGTCCTTCATTGACGACCGAGGTCGACCGCTGAAGGATATTCGCATCCGTCACACCACTGTGCTTGATGATCCC TTTGATGACCCACCGAATCTAGTTGAACCACCTGAAAGCCCGGTGCCCTCCAAGGCCCAATTAGCCACGGTCAGG ATCGCGGACGATGAGGACTTGGATGATGATATGGATGAAGAGGCTATGGACAAGCTGCGTCGCGAGCGTGAGGCT CGCGCGCAGGCGCTGACATTGGAAATGGTGGGAGACTTGCCGTTCGCCGACGTCAAGCCGCCAGAGAATATTCTT TTTGTCTGCAAGCTTAACCCGGTCACACAAGATGAGGATCTGAATCTTATTTTCAGCCGCTTTGGAACTATATTG TCTTGCGAGGTCATTCGGGACAAGCGCACTGGTGACAGTCTACAATATGCCTTTATTGAATTCGAGGAACAGAAG GCCTGTGAACAGGCCTATTTCAAGATGCAGGGTGTATTGATTGATGATCACCGGATACATGTGGATTTCTCACAG AGTGTATCCAAGTTATCCGAAAGCTGGCGCAATTCCACCGTCACCAAGCGCCGACAGAGAGGTGGATTTGGTGGT GTTGCCGACCTTGAAGCGAAACGACAATACCGAGAGCTAGACGAGGCGCCCATAGATGAGGATGATGCTAGATAT CTGTTTGACAAACGAAACAAGAACAGGGGCGCTCCAGCTCCGCCCCGCGAGGCTCCGTCAGACCGCACTCGCGGT CGTCGAGATCGAGGGAGTCGAAGTCCCCGTCGTGAACAGGATCGATACCGTCGTCGATCCTATAGTCGGAGTCCA CAGAGGGATTCACGAAGAGATTCACGAAAAGAACGAAGCTACAATCATCGTGGACGATAG
Transcript	>Pro_DTO377G3_2\|g7266.t1 ATGAGCGCGCTCTTAGAGACCTCCCTAGGCGACATTGTAATTGACCTGTTGGTCGATGATGCACCCAAGGCGTGT GACAACTTCTTGAAGCTATGCAAGCTCAAGTACTACAATTTCTCGCCCATCCATAGCGTCCAAAAGAACTTCACC TTCCAGACCGGCGACCCGCTCGGCCCTGATGCACCTGAGAGTGATGGAGGATCTTCGGTTTGGGGTCTGCTGGAT GGACCGTCGAAAAGAACATTTCCGCTCCAGGCGTCGCGCACGTTGAAACACTTGGAGCGCGGCACGGTGAGTATG GCGACGGTACCGGCGAAGAACGACCCCGACCAACGGCTAGCCGCCAGTCAATTCATCATTACACTTGGAGACAAT CTAGATTATTTAGATGGCAAGGCCGTGATTTTCGGCAAGGTCGTCGAGGGCTTCGATGTCCTAGAGAAAATCAAT GAGTCCTTCATTGACGACCGAGGTCGACCGCTGAAGGATATTCGCATCCGTCACACCACTGTGCTTGATGATCCC TTTGATGACCCACCGAATCTAGTTGAACCACCTGAAAGCCCGGTGCCCTCCAAGGCCCAATTAGCCACGGTCAGG ATCGCGGACGATGAGGACTTGGATGATGATATGGATGAAGAGGCTATGGACAAGCTGCGTCGCGAGCGTGAGGCT CGCGCGCAGGCGCTGACATTGGAAATGGTGGGAGACTTGCCGTTCGCCGACGTCAAGCCGCCAGAGAATATTCTT TTTGTCTGCAAGCTTAACCCGGTCACACAAGATGAGGATCTGAATCTTATTTTCAGCCGCTTTGGAACTATATTG TCTTGCGAGGTCATTCGGGACAAGCGCACTGGTGACAGTCTACAATATGCCTTTATTGAATTCGAGGAACAGAAG GCCTGTGAACAGGCCTATTTCAAGATGCAGGGTGTATTGATTGATGATCACCGGATACATGTGGATTTCTCACAG AGTGTATCCAAGTTATCCGAAAGCTGGCGCAATTCCACCGTCACCAAGCGCCGACAGAGAGGTGGATTTGGTGGT GTTGCCGACCTTGAAGCGAAACGACAATACCGAGAGCTAGACGAGGCGCCCATAGATGAGGATGATGCTAGATAT CTGTTTGACAAACGAAACAAGAACAGGGGCGCTCCAGCTCCGCCCCGCGAGGCTCCGTCAGACCGCACTCGCGGT CGTCGAGATCGAGGGAGTCGAAGTCCCCGTCGTGAACAGGATCGATACCGTCGTCGATCCTATAGTCGGAGTCCA CAGAGGGATTCACGAAGAGATTCACGAAAAGAACGAAGCTACAATCATCGTGGACGATAG
Gene	>Pro_DTO377G3_2\|g7266.t1 ATGAGCGCGCTCTTAGAGACCTCCCTAGGCGACATTGTAATTGACCTGTTGGTCGATGATGCACCCAAGGCGTGT GACAAGTGAGTGGCTCCATTCCTTGGCTTTCCCAGTCTGCTGAACCTGAAACTAAGCTCATTTTGTGTGCTTTTA GCTTCTTGAAGCTATGCAAGCTCAAGTACTACAATTTCTCGCCCATCCATAGCGTCCAAAAGAACTTCACCTTCC AGACCGGCGACCCGCTCGGCCCTGATGCACCTGAGAGTGATGGAGGATCTTCGGTTTGGGGTCTGCTGGATGGAC CGTCGAAAAGAACATTTCCGCTCCAGGCGTCGCGCACGTTGAAACACTTGGAGCGCGGCACGGTGAGTATGGCGA CGGTACCGGCGAAGAACGACCCCGACCAACGGCTAGCCGCCAGTCAATTCATCATTACACTTGGAGACAATCTAG ATTATTTAGATGGCAAGGCCGTGATTTTCGGCAAGGTCGTCGAGGGCTTCGATGTCCTAGAGAAAATCAATGAGT CCTTCATTGACGACCGAGGTCGACCGCTGAAGGATATTCGCATCCGTCACACCACTGTGCTTGATGATCCCTTTG ATGACCCACCGAATCTAGTTGAACCACCTGAAAGCCCGGTGCCCTCCAAGGCCCAATTAGCCACGGTCAGGATCG CGGACGATGAGGACTTGGATGATGATATGGATGAAGAGGCTATGGACAAGCTGCGTCGCGAGCGTGAGGCTCGCG CGCAGGCGCTGACATTGGAAATGGTGGGAGACTTGCCGTTCGCCGACGTCAAGCCGCCAGAGAATATTCTTTTTG TCTGCAAGCTTAACCCGGTCACACAAGGTTTGTCGCATTCCCACACGGAACCGTGAAATTATGCTAACCGATGCT AGATGAGGATCTGAATCTTATTTTCAGCCGCTTTGGAACTATATTGTCTTGCGAGGTCATTCGGGACAAGCGCAC TGGTGACAGTCTACAATATGCCTTTATTGAATTCGAGGAACAGAAGGCCTGTGAACAGGCCTATTTCAAGATGCA GGGTGTATTGATTGATGATCACCGGATACATGTGGATTTCTCACAGAGTGTAAGTGCACCTCATCACCGCTCATC TCCTCCGACCAATATGCTAATACATCCCAGGTATCCAAGTTATCCGAAAGCTGGCGCAATTCCACCGTCACCAAG CGCCGACAGAGAGGTGGATTTGGTGGTGTTGCCGACCTTGAAGCGAAACGACAATACCGAGAGCTAGACGAGGCG CCCATAGATGAGGATGATGCTAGATATCTGTTTGACAAACGAAACAAGAACAGGGGCGCTCCAGCTCCGCCCCGC GAGGCTCCGTCAGACCGCACTCGCGGTCGTCGAGATCGAGGGAGTCGAAGTCCCCGTCGTGAACAGGATCGATAC CGTCGTCGATCCTATAGTCGGAGTCCACAGAGGGATTCACGAAGAGATTCACGAAAAGAACGAAGCTACAATCAT CGTGGACGATAG

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences