Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7266.t1
Gene name
Locationscaffold_22:81918..83430
Strand+
Gene length (bp)1512
Transcript length (bp)1335
Coding sequence length (bp)1335
Protein length (aa) 445

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00160 Pro_isomerase Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 5.2E-36 5 170
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8.3E-14 250 320

GO

GO Term Description Terminal node
GO:0003755 peptidyl-prolyl cis-trans isomerase activity Yes
GO:0003676 nucleic acid binding Yes
GO:0000413 protein peptidyl-prolyl isomerization Yes
GO:0043170 macromolecule metabolic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0018193 peptidyl-amino acid modification No
GO:0006464 cellular protein modification process No
GO:0016853 isomerase activity No
GO:1901363 heterocyclic compound binding No
GO:0097159 organic cyclic compound binding No
GO:0140096 catalytic activity, acting on a protein No
GO:0071704 organic substance metabolic process No
GO:0044260 cellular macromolecule metabolic process No
GO:0036211 protein modification process No
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No
GO:0044237 cellular metabolic process No
GO:0009987 cellular process No
GO:0018208 peptidyl-proline modification No
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0003674 molecular_function No
GO:0044267 cellular protein metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0043412 macromolecule modification No
GO:0005488 binding No
GO:0019538 protein metabolic process No
GO:0016859 cis-trans isomerase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7266.t1
MSALLETSLGDIVIDLLVDDAPKACDNFLKLCKLKYYNFSPIHSVQKNFTFQTGDPLGPDAPESDGGSSVWGLLD
GPSKRTFPLQASRTLKHLERGTVSMATVPAKNDPDQRLAASQFIITLGDNLDYLDGKAVIFGKVVEGFDVLEKIN
ESFIDDRGRPLKDIRIRHTTVLDDPFDDPPNLVEPPESPVPSKAQLATVRIADDEDLDDDMDEEAMDKLRREREA
RAQALTLEMVGDLPFADVKPPENILFVCKLNPVTQDEDLNLIFSRFGTILSCEVIRDKRTGDSLQYAFIEFEEQK
ACEQAYFKMQGVLIDDHRIHVDFSQSVSKLSESWRNSTVTKRRQRGGFGGVADLEAKRQYRELDEAPIDEDDARY
LFDKRNKNRGAPAPPREAPSDRTRGRRDRGSRSPRREQDRYRRRSYSRSPQRDSRRDSRKERSYNHRGR*
Coding >Pro_DTO377G3_2|g7266.t1
ATGAGCGCGCTCTTAGAGACCTCCCTAGGCGACATTGTAATTGACCTGTTGGTCGATGATGCACCCAAGGCGTGT
GACAACTTCTTGAAGCTATGCAAGCTCAAGTACTACAATTTCTCGCCCATCCATAGCGTCCAAAAGAACTTCACC
TTCCAGACCGGCGACCCGCTCGGCCCTGATGCACCTGAGAGTGATGGAGGATCTTCGGTTTGGGGTCTGCTGGAT
GGACCGTCGAAAAGAACATTTCCGCTCCAGGCGTCGCGCACGTTGAAACACTTGGAGCGCGGCACGGTGAGTATG
GCGACGGTACCGGCGAAGAACGACCCCGACCAACGGCTAGCCGCCAGTCAATTCATCATTACACTTGGAGACAAT
CTAGATTATTTAGATGGCAAGGCCGTGATTTTCGGCAAGGTCGTCGAGGGCTTCGATGTCCTAGAGAAAATCAAT
GAGTCCTTCATTGACGACCGAGGTCGACCGCTGAAGGATATTCGCATCCGTCACACCACTGTGCTTGATGATCCC
TTTGATGACCCACCGAATCTAGTTGAACCACCTGAAAGCCCGGTGCCCTCCAAGGCCCAATTAGCCACGGTCAGG
ATCGCGGACGATGAGGACTTGGATGATGATATGGATGAAGAGGCTATGGACAAGCTGCGTCGCGAGCGTGAGGCT
CGCGCGCAGGCGCTGACATTGGAAATGGTGGGAGACTTGCCGTTCGCCGACGTCAAGCCGCCAGAGAATATTCTT
TTTGTCTGCAAGCTTAACCCGGTCACACAAGATGAGGATCTGAATCTTATTTTCAGCCGCTTTGGAACTATATTG
TCTTGCGAGGTCATTCGGGACAAGCGCACTGGTGACAGTCTACAATATGCCTTTATTGAATTCGAGGAACAGAAG
GCCTGTGAACAGGCCTATTTCAAGATGCAGGGTGTATTGATTGATGATCACCGGATACATGTGGATTTCTCACAG
AGTGTATCCAAGTTATCCGAAAGCTGGCGCAATTCCACCGTCACCAAGCGCCGACAGAGAGGTGGATTTGGTGGT
GTTGCCGACCTTGAAGCGAAACGACAATACCGAGAGCTAGACGAGGCGCCCATAGATGAGGATGATGCTAGATAT
CTGTTTGACAAACGAAACAAGAACAGGGGCGCTCCAGCTCCGCCCCGCGAGGCTCCGTCAGACCGCACTCGCGGT
CGTCGAGATCGAGGGAGTCGAAGTCCCCGTCGTGAACAGGATCGATACCGTCGTCGATCCTATAGTCGGAGTCCA
CAGAGGGATTCACGAAGAGATTCACGAAAAGAACGAAGCTACAATCATCGTGGACGATAG
Transcript >Pro_DTO377G3_2|g7266.t1
ATGAGCGCGCTCTTAGAGACCTCCCTAGGCGACATTGTAATTGACCTGTTGGTCGATGATGCACCCAAGGCGTGT
GACAACTTCTTGAAGCTATGCAAGCTCAAGTACTACAATTTCTCGCCCATCCATAGCGTCCAAAAGAACTTCACC
TTCCAGACCGGCGACCCGCTCGGCCCTGATGCACCTGAGAGTGATGGAGGATCTTCGGTTTGGGGTCTGCTGGAT
GGACCGTCGAAAAGAACATTTCCGCTCCAGGCGTCGCGCACGTTGAAACACTTGGAGCGCGGCACGGTGAGTATG
GCGACGGTACCGGCGAAGAACGACCCCGACCAACGGCTAGCCGCCAGTCAATTCATCATTACACTTGGAGACAAT
CTAGATTATTTAGATGGCAAGGCCGTGATTTTCGGCAAGGTCGTCGAGGGCTTCGATGTCCTAGAGAAAATCAAT
GAGTCCTTCATTGACGACCGAGGTCGACCGCTGAAGGATATTCGCATCCGTCACACCACTGTGCTTGATGATCCC
TTTGATGACCCACCGAATCTAGTTGAACCACCTGAAAGCCCGGTGCCCTCCAAGGCCCAATTAGCCACGGTCAGG
ATCGCGGACGATGAGGACTTGGATGATGATATGGATGAAGAGGCTATGGACAAGCTGCGTCGCGAGCGTGAGGCT
CGCGCGCAGGCGCTGACATTGGAAATGGTGGGAGACTTGCCGTTCGCCGACGTCAAGCCGCCAGAGAATATTCTT
TTTGTCTGCAAGCTTAACCCGGTCACACAAGATGAGGATCTGAATCTTATTTTCAGCCGCTTTGGAACTATATTG
TCTTGCGAGGTCATTCGGGACAAGCGCACTGGTGACAGTCTACAATATGCCTTTATTGAATTCGAGGAACAGAAG
GCCTGTGAACAGGCCTATTTCAAGATGCAGGGTGTATTGATTGATGATCACCGGATACATGTGGATTTCTCACAG
AGTGTATCCAAGTTATCCGAAAGCTGGCGCAATTCCACCGTCACCAAGCGCCGACAGAGAGGTGGATTTGGTGGT
GTTGCCGACCTTGAAGCGAAACGACAATACCGAGAGCTAGACGAGGCGCCCATAGATGAGGATGATGCTAGATAT
CTGTTTGACAAACGAAACAAGAACAGGGGCGCTCCAGCTCCGCCCCGCGAGGCTCCGTCAGACCGCACTCGCGGT
CGTCGAGATCGAGGGAGTCGAAGTCCCCGTCGTGAACAGGATCGATACCGTCGTCGATCCTATAGTCGGAGTCCA
CAGAGGGATTCACGAAGAGATTCACGAAAAGAACGAAGCTACAATCATCGTGGACGATAG
Gene >Pro_DTO377G3_2|g7266.t1
ATGAGCGCGCTCTTAGAGACCTCCCTAGGCGACATTGTAATTGACCTGTTGGTCGATGATGCACCCAAGGCGTGT
GACAAGTGAGTGGCTCCATTCCTTGGCTTTCCCAGTCTGCTGAACCTGAAACTAAGCTCATTTTGTGTGCTTTTA
GCTTCTTGAAGCTATGCAAGCTCAAGTACTACAATTTCTCGCCCATCCATAGCGTCCAAAAGAACTTCACCTTCC
AGACCGGCGACCCGCTCGGCCCTGATGCACCTGAGAGTGATGGAGGATCTTCGGTTTGGGGTCTGCTGGATGGAC
CGTCGAAAAGAACATTTCCGCTCCAGGCGTCGCGCACGTTGAAACACTTGGAGCGCGGCACGGTGAGTATGGCGA
CGGTACCGGCGAAGAACGACCCCGACCAACGGCTAGCCGCCAGTCAATTCATCATTACACTTGGAGACAATCTAG
ATTATTTAGATGGCAAGGCCGTGATTTTCGGCAAGGTCGTCGAGGGCTTCGATGTCCTAGAGAAAATCAATGAGT
CCTTCATTGACGACCGAGGTCGACCGCTGAAGGATATTCGCATCCGTCACACCACTGTGCTTGATGATCCCTTTG
ATGACCCACCGAATCTAGTTGAACCACCTGAAAGCCCGGTGCCCTCCAAGGCCCAATTAGCCACGGTCAGGATCG
CGGACGATGAGGACTTGGATGATGATATGGATGAAGAGGCTATGGACAAGCTGCGTCGCGAGCGTGAGGCTCGCG
CGCAGGCGCTGACATTGGAAATGGTGGGAGACTTGCCGTTCGCCGACGTCAAGCCGCCAGAGAATATTCTTTTTG
TCTGCAAGCTTAACCCGGTCACACAAGGTTTGTCGCATTCCCACACGGAACCGTGAAATTATGCTAACCGATGCT
AGATGAGGATCTGAATCTTATTTTCAGCCGCTTTGGAACTATATTGTCTTGCGAGGTCATTCGGGACAAGCGCAC
TGGTGACAGTCTACAATATGCCTTTATTGAATTCGAGGAACAGAAGGCCTGTGAACAGGCCTATTTCAAGATGCA
GGGTGTATTGATTGATGATCACCGGATACATGTGGATTTCTCACAGAGTGTAAGTGCACCTCATCACCGCTCATC
TCCTCCGACCAATATGCTAATACATCCCAGGTATCCAAGTTATCCGAAAGCTGGCGCAATTCCACCGTCACCAAG
CGCCGACAGAGAGGTGGATTTGGTGGTGTTGCCGACCTTGAAGCGAAACGACAATACCGAGAGCTAGACGAGGCG
CCCATAGATGAGGATGATGCTAGATATCTGTTTGACAAACGAAACAAGAACAGGGGCGCTCCAGCTCCGCCCCGC
GAGGCTCCGTCAGACCGCACTCGCGGTCGTCGAGATCGAGGGAGTCGAAGTCCCCGTCGTGAACAGGATCGATAC
CGTCGTCGATCCTATAGTCGGAGTCCACAGAGGGATTCACGAAGAGATTCACGAAAAGAACGAAGCTACAATCAT
CGTGGACGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail