Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7236.t1
Gene name
Locationscaffold_22:8436..10030
Strand+
Gene length (bp)1594
Transcript length (bp)1395
Coding sequence length (bp)1395
Protein length (aa) 465

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03663 Glyco_hydro_76 Glycosyl hydrolase family 76 3.5E-112 35 398

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 26 0.45

Transmembrane Domains

Domain # Start End Length
1 440 462 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7236.t1
MRFKGAGHMAIVALRILLFTNQVLALNLDVNNQQSIKDAGSTAAYNMMTWYKENGTDNPGFISRSWWTGAALFLA
CLNYWHATNDTTYNDEVSIGLQHQGGSGGDYMPSWAVGIGNDDQMFWGLAAITAAEYKFPNRPSGDTWLTLAEGV
FNDQISPEGKGWETTICGGGLRWQKEIWQSGYTMKNAVSNGGFFMLAARLAWYTQKNNYATWAAKVYDWSTTVNL
VNNKTWAVADSVRAGSGGPNGCSLPDHTEWTYNYGTYISGAGYMYAYTNDTKWLNITNNLVDSLFTTFFLPQHGG
VITDWECEASDECYKDANGPLFKGLTVSWLADVALIVPFLREKILPKLQVSAQGAANSCTGNNQNLCGNRWYGGY
DGQNSMENAMSGSQIMSAVMLQFLGTSSKPVSTATGGNGTSDPSAGTGERSGPAPLSPITTADRAGAGILTVLFV
ALMLGGVVFLFMDP*
Coding >Pro_DTO377G3_2|g7236.t1
ATGAGGTTCAAAGGTGCCGGGCATATGGCCATAGTGGCGTTGCGCATTCTACTGTTTACAAATCAAGTCTTGGCG
CTCAACCTGGATGTTAACAATCAGCAATCCATCAAAGATGCCGGGAGCACCGCCGCCTACAACATGATGACATGG
TACAAAGAAAATGGGACAGATAACCCGGGTTTCATCTCAAGATCTTGGTGGACAGGAGCTGCTTTGTTTCTAGCA
TGTCTCAATTATTGGCATGCTACAAACGACACAACCTACAACGATGAAGTCAGCATCGGATTACAACATCAGGGG
GGTTCTGGCGGAGACTACATGCCTTCATGGGCAGTAGGCATAGGAAATGATGATCAAATGTTCTGGGGCCTCGCG
GCGATCACCGCAGCAGAATATAAATTCCCGAATCGTCCAAGTGGGGACACCTGGCTCACCCTTGCAGAGGGCGTT
TTCAATGACCAGATATCGCCAGAAGGGAAGGGATGGGAGACGACTATTTGTGGAGGTGGCCTTCGCTGGCAGAAG
GAGATATGGCAAAGTGGTTATACCATGAAGAACGCGGTGTCGAACGGTGGCTTTTTCATGCTCGCGGCTCGTCTC
GCTTGGTATACCCAAAAGAACAACTACGCCACGTGGGCTGCGAAAGTCTACGACTGGTCTACGACGGTGAATTTG
GTCAATAATAAAACCTGGGCAGTGGCAGATAGTGTCAGAGCAGGCTCTGGGGGTCCCAATGGCTGCAGTCTTCCT
GACCACACCGAGTGGACCTACAACTATGGTACCTATATATCTGGTGCTGGCTATATGTATGCCTACACAAACGAT
ACTAAATGGCTTAATATCACAAACAACCTAGTGGATTCATTGTTTACTACATTTTTCCTACCTCAACACGGAGGT
GTGATTACAGACTGGGAGTGCGAAGCTTCGGACGAATGCTACAAAGATGCGAATGGTCCACTTTTCAAAGGCCTT
ACTGTGTCGTGGCTTGCAGATGTTGCATTGATCGTCCCTTTCCTCAGGGAGAAGATCCTACCCAAACTCCAAGTT
TCTGCCCAGGGTGCTGCAAATTCATGCACCGGCAACAACCAAAACCTCTGTGGTAACCGCTGGTACGGCGGGTAT
GATGGGCAAAATTCAATGGAGAATGCAATGAGTGGTAGTCAGATAATGAGTGCTGTTATGCTGCAATTTCTAGGC
ACATCCTCAAAACCAGTCTCGACAGCAACAGGAGGGAACGGCACAAGCGACCCGAGTGCTGGTACTGGGGAAAGG
TCGGGGCCTGCACCGTTGTCGCCTATCACAACGGCAGATAGAGCAGGAGCAGGAATCCTGACAGTGCTTTTCGTG
GCTCTTATGTTAGGCGGAGTGGTCTTTTTGTTTATGGACCCCTGA
Transcript >Pro_DTO377G3_2|g7236.t1
ATGAGGTTCAAAGGTGCCGGGCATATGGCCATAGTGGCGTTGCGCATTCTACTGTTTACAAATCAAGTCTTGGCG
CTCAACCTGGATGTTAACAATCAGCAATCCATCAAAGATGCCGGGAGCACCGCCGCCTACAACATGATGACATGG
TACAAAGAAAATGGGACAGATAACCCGGGTTTCATCTCAAGATCTTGGTGGACAGGAGCTGCTTTGTTTCTAGCA
TGTCTCAATTATTGGCATGCTACAAACGACACAACCTACAACGATGAAGTCAGCATCGGATTACAACATCAGGGG
GGTTCTGGCGGAGACTACATGCCTTCATGGGCAGTAGGCATAGGAAATGATGATCAAATGTTCTGGGGCCTCGCG
GCGATCACCGCAGCAGAATATAAATTCCCGAATCGTCCAAGTGGGGACACCTGGCTCACCCTTGCAGAGGGCGTT
TTCAATGACCAGATATCGCCAGAAGGGAAGGGATGGGAGACGACTATTTGTGGAGGTGGCCTTCGCTGGCAGAAG
GAGATATGGCAAAGTGGTTATACCATGAAGAACGCGGTGTCGAACGGTGGCTTTTTCATGCTCGCGGCTCGTCTC
GCTTGGTATACCCAAAAGAACAACTACGCCACGTGGGCTGCGAAAGTCTACGACTGGTCTACGACGGTGAATTTG
GTCAATAATAAAACCTGGGCAGTGGCAGATAGTGTCAGAGCAGGCTCTGGGGGTCCCAATGGCTGCAGTCTTCCT
GACCACACCGAGTGGACCTACAACTATGGTACCTATATATCTGGTGCTGGCTATATGTATGCCTACACAAACGAT
ACTAAATGGCTTAATATCACAAACAACCTAGTGGATTCATTGTTTACTACATTTTTCCTACCTCAACACGGAGGT
GTGATTACAGACTGGGAGTGCGAAGCTTCGGACGAATGCTACAAAGATGCGAATGGTCCACTTTTCAAAGGCCTT
ACTGTGTCGTGGCTTGCAGATGTTGCATTGATCGTCCCTTTCCTCAGGGAGAAGATCCTACCCAAACTCCAAGTT
TCTGCCCAGGGTGCTGCAAATTCATGCACCGGCAACAACCAAAACCTCTGTGGTAACCGCTGGTACGGCGGGTAT
GATGGGCAAAATTCAATGGAGAATGCAATGAGTGGTAGTCAGATAATGAGTGCTGTTATGCTGCAATTTCTAGGC
ACATCCTCAAAACCAGTCTCGACAGCAACAGGAGGGAACGGCACAAGCGACCCGAGTGCTGGTACTGGGGAAAGG
TCGGGGCCTGCACCGTTGTCGCCTATCACAACGGCAGATAGAGCAGGAGCAGGAATCCTGACAGTGCTTTTCGTG
GCTCTTATGTTAGGCGGAGTGGTCTTTTTGTTTATGGACCCCTGA
Gene >Pro_DTO377G3_2|g7236.t1
ATGAGGTTCAAAGGTGCCGGGCATATGGCCATAGTGGCGTTGCGCATTCTACTGTTTACAAATCAAGTCTTGGCG
CTCAACCTGGATGTTAACAATCAGCGTAAGATAACTATGTTTTCATATCTTTCTAACGGTTGAGTTGCTAATTAC
ATATATTTTCAATGAGTAGAATCCATCAAAGATGCCGGGAGCACCGCCGCCTACAACATGATGACATGGTACAAA
GAAAATGGGACAGATAACCCGGGTTTCATCTCAAGATCTTGGTGGACAGGAGCTGCTTTGTTTCTAGCATGTCTC
AATTATTGGCATGCTACAAACGACACAACCTACAACGATGAAGTCAGCATCGGATTACAACATCAGGGGGGTTCT
GGCGGAGACTACATGCCTTCATGGGCAGTAGGCATAGTAAGTGTCTCTCTCAAGATATGTAGTCAAAGTGCTAAC
CGTTGCATAGGGAAATGATGATCAAATGTTCTGGGGCCTCGCGGCGATCACCGCAGCAGAATATAAATTCCCGAA
TCGTCCAAGTGGGGACACCTGGCTCACCCTTGCAGAGGGCGTTTTCAATGACCAGATATCGCCAGAAGGGAAGGG
ATGGGAGACGACTATTTGTGGAGGTGGCCTTCGCTGGCAGAAGGAGATATGGCAAAGTGGTTATACCATGAAGAA
CGCGGTGTCGAACGGTGGCTTTTTCATGCTCGCGGCTCGTCTCGCTTGGTATACCCAAAAGAACAACTACGCCAC
GTGGGCTGCGAAAGTCTACGACTGGTCTACGACGGTGAATTTGGTCAATAATAAAACCTGGGCAGTGGCAGATAG
TGTCAGAGCAGGCTCTGGGGGTCCCAATGGCTGCAGTCTTCCTGACCACACCGAGTGGACCTACAACTATGGTAC
CTATATATCTGGTGCTGGCTATATGTATGCCTACGTAAGTATTTTTATCCCCCACCCTTTAGTAAATCAGAACTA
CACTCCTGTCTTGGCATGCTAATAACAAACCTCGTTGTAGACAAACGATACTAAATGGCTTAATATCACAAACAA
CCTAGTGGATTCATTGTTTACTACATTTTTCCTACCTCAACACGGAGGTGTGATTACAGACTGGGAGTGCGAAGC
TTCGGACGAATGCTACAAAGATGCGAATGGTCCACTTTTCAAAGGCCTTACTGTGTCGTGGCTTGCAGATGTTGC
ATTGATCGTCCCTTTCCTCAGGGAGAAGATCCTACCCAAACTCCAAGTTTCTGCCCAGGGTGCTGCAAATTCATG
CACCGGCAACAACCAAAACCTCTGTGGTAACCGCTGGTACGGCGGGTATGATGGGCAAAATTCAATGGAGAATGC
AATGAGTGGTAGTCAGATAATGAGTGCTGTTATGCTGCAATTTCTAGGCACATCCTCAAAACCAGTCTCGACAGC
AACAGGAGGGAACGGCACAAGCGACCCGAGTGCTGGTACTGGGGAAAGGTCGGGGCCTGCACCGTTGTCGCCTAT
CACAACGGCAGATAGAGCAGGAGCAGGAATCCTGACAGTGCTTTTCGTGGCTCTTATGTTAGGCGGAGTGGTCTT
TTTGTTTATGGACCCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail