Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7219.t1
Gene name
Locationscaffold_21:364260..365903
Strand+
Gene length (bp)1643
Transcript length (bp)1272
Coding sequence length (bp)1272
Protein length (aa) 424

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13306 LRR_5 BspA type Leucine rich repeat region (6 copies) 3.0E-02 118 212
PF13306 LRR_5 BspA type Leucine rich repeat region (6 copies) 1.9E-01 233 289

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7219.t1
MPDAVLCVFLPPWYSGTCASSLITHCEFSCSTHSHISNRIFRAVFAATSCGDTKVSTQSDADAVNTCTTIKGDIT
IDKSYSGDLTLSGIEKITGGLICSGGQNVSSISASSLTSIGKAFDLEGLTTLTLLDFAELDSVGSINWEALPKLQ
SLSFAKGVTQAGDVSIANTGLTDLTGITLKTVGTFSIQNNRDLKTININNLMNATDLISFSGNYDTLEVDLPNLG
TGTNMTFQNISSVSLPSLEKLTGQLGFWGTKFETFSAPNLTQTGDLIFKDNTKLSNISMPVLKTVDGGFTIARDD
KLSTISLPMLQRVNGAIDFSGTFNKLSLGALKDVEGSFNMQSTRGNFSCDDLRKLKSDDVIKGTFKCDATNANAT
TSTGTSGSSTSSSSTTSAATSSGAAFMTGANVPVVGIAAVFGALAQLL*
Coding >Pro_DTO377G3_2|g7219.t1
ATGCCGGATGCGGTACTGTGTGTGTTTCTTCCCCCTTGGTATAGTGGCACCTGCGCTTCTTCTCTAATCACTCAT
TGCGAATTTTCCTGCTCAACCCATTCCCATATCTCTAATCGAATCTTTCGGGCAGTTTTCGCTGCCACTTCCTGC
GGTGATACCAAGGTCAGCACCCAGAGCGACGCTGATGCGGTCAACACTTGCACCACCATCAAGGGTGATATCACC
ATCGACAAGTCCTACAGCGGCGACCTTACGCTCAGCGGTATCGAGAAGATTACTGGTGGTCTGATCTGCTCCGGT
GGCCAGAACGTCAGCTCTATCAGCGCCAGCTCTCTCACATCGATCGGCAAAGCCTTCGACTTGGAGGGACTCACC
ACCCTGACCCTGCTTGACTTCGCTGAGCTCGACTCTGTTGGCTCCATCAACTGGGAGGCTCTCCCTAAGCTCCAG
TCCCTGTCTTTCGCCAAGGGTGTCACCCAGGCCGGCGATGTCAGCATCGCCAACACTGGTCTCACTGATCTGACC
GGTATTACCCTCAAGACTGTCGGTACCTTCAGCATCCAGAACAACCGTGATCTGAAGACCATCAACATCAACAAC
CTCATGAACGCCACCGACTTGATCAGCTTCTCGGGTAACTACGATACCCTCGAGGTCGATCTTCCCAACCTCGGC
ACCGGTACCAACATGACCTTCCAGAACATCTCCTCGGTCTCCCTGCCTTCCCTTGAGAAGCTTACCGGTCAGCTC
GGCTTCTGGGGTACCAAGTTCGAGACTTTCTCCGCTCCCAACCTTACCCAGACCGGTGACTTGATCTTCAAGGAC
AACACCAAGCTGTCCAACATCAGCATGCCCGTTCTGAAGACTGTTGACGGTGGATTCACCATTGCCCGTGATGAC
AAGCTCTCCACCATCAGCCTGCCCATGCTCCAGCGTGTTAACGGTGCCATTGACTTCAGCGGTACCTTCAACAAG
CTTTCTCTTGGTGCTCTCAAGGACGTCGAGGGTAGCTTCAACATGCAGAGCACCCGCGGTAACTTCAGCTGCGAC
GATCTCCGCAAGCTGAAGAGCGACGATGTCATCAAGGGTACCTTCAAGTGTGATGCCACCAACGCCAACGCCACC
ACTTCCACCGGCACTTCTGGCTCCTCTACCTCTTCCAGCTCCACCACCTCTGCTGCTACCAGCTCCGGTGCTGCC
TTCATGACCGGCGCCAACGTTCCCGTTGTTGGTATTGCTGCCGTCTTCGGTGCTCTTGCCCAGCTTCTGTAA
Transcript >Pro_DTO377G3_2|g7219.t1
ATGCCGGATGCGGTACTGTGTGTGTTTCTTCCCCCTTGGTATAGTGGCACCTGCGCTTCTTCTCTAATCACTCAT
TGCGAATTTTCCTGCTCAACCCATTCCCATATCTCTAATCGAATCTTTCGGGCAGTTTTCGCTGCCACTTCCTGC
GGTGATACCAAGGTCAGCACCCAGAGCGACGCTGATGCGGTCAACACTTGCACCACCATCAAGGGTGATATCACC
ATCGACAAGTCCTACAGCGGCGACCTTACGCTCAGCGGTATCGAGAAGATTACTGGTGGTCTGATCTGCTCCGGT
GGCCAGAACGTCAGCTCTATCAGCGCCAGCTCTCTCACATCGATCGGCAAAGCCTTCGACTTGGAGGGACTCACC
ACCCTGACCCTGCTTGACTTCGCTGAGCTCGACTCTGTTGGCTCCATCAACTGGGAGGCTCTCCCTAAGCTCCAG
TCCCTGTCTTTCGCCAAGGGTGTCACCCAGGCCGGCGATGTCAGCATCGCCAACACTGGTCTCACTGATCTGACC
GGTATTACCCTCAAGACTGTCGGTACCTTCAGCATCCAGAACAACCGTGATCTGAAGACCATCAACATCAACAAC
CTCATGAACGCCACCGACTTGATCAGCTTCTCGGGTAACTACGATACCCTCGAGGTCGATCTTCCCAACCTCGGC
ACCGGTACCAACATGACCTTCCAGAACATCTCCTCGGTCTCCCTGCCTTCCCTTGAGAAGCTTACCGGTCAGCTC
GGCTTCTGGGGTACCAAGTTCGAGACTTTCTCCGCTCCCAACCTTACCCAGACCGGTGACTTGATCTTCAAGGAC
AACACCAAGCTGTCCAACATCAGCATGCCCGTTCTGAAGACTGTTGACGGTGGATTCACCATTGCCCGTGATGAC
AAGCTCTCCACCATCAGCCTGCCCATGCTCCAGCGTGTTAACGGTGCCATTGACTTCAGCGGTACCTTCAACAAG
CTTTCTCTTGGTGCTCTCAAGGACGTCGAGGGTAGCTTCAACATGCAGAGCACCCGCGGTAACTTCAGCTGCGAC
GATCTCCGCAAGCTGAAGAGCGACGATGTCATCAAGGGTACCTTCAAGTGTGATGCCACCAACGCCAACGCCACC
ACTTCCACCGGCACTTCTGGCTCCTCTACCTCTTCCAGCTCCACCACCTCTGCTGCTACCAGCTCCGGTGCTGCC
TTCATGACCGGCGCCAACGTTCCCGTTGTTGGTATTGCTGCCGTCTTCGGTGCTCTTGCCCAGCTTCTGTAA
Gene >Pro_DTO377G3_2|g7219.t1
ATGCCGGATGCGGTACTGTGTGTGTTTCTTCCCCCTTGGTATAGTGGCACCTGGTAAGATTAGAATACAAACAAT
CTCCACCCTCCCCTTTCCTCTCGCCCCAAGGCTCCTTCTTCTTCCTCATTTTACTCTCCTCCAACCTTCGTCCAT
TCGTTCTTACCATTATTTGAAGTTCCTGCCTCGTACCACTCGGCAGTATATCTCCGCTTCCCTCTCGTTTGAAGC
GCTTCTTCTCTAATCACTCATTGCGAATTTTCCTGCTCAACCCATTCCCATATCTCTAATCGGTACCGACACCAA
TAACCCCCTGATCGAAAAAATCACACTGACACCTCCTTTAGAATCTTGTGATGTCTCTCAAGTACATCCTCCCCG
CGCTGGCCGCCAGTCGGGCAGTTTTCGCTGCCAGTGAGTATTCTGTTCCCGGCATAATGATACACCCACTAATCA
TGTCCTCTTACAGCTTCCTGCGGTGATACCAAGGTCAGCACCCAGAGCGACGCTGATGCGGTCAACACTTGCACC
ACCATCAAGGGTGATATCACCATCGACAAGTCCTACAGCGGCGACCTTACGCTCAGCGGTATCGAGAAGATTACT
GGTGGTCTGATCTGCTCCGGTGGCCAGAACGTCAGCTCTATCAGCGCCAGCTCTCTCACATCGATCGGCAAAGCC
TTCGACTTGGAGGGACTCACCACCCTGACCCTGCTTGACTTCGCTGAGCTCGACTCTGTTGGCTCCATCAACTGG
GAGGCTCTCCCTAAGCTCCAGTCCCTGTCTTTCGCCAAGGGTGTCACCCAGGCCGGCGATGTCAGCATCGCCAAC
ACTGGTCTCACTGATCTGACCGGTATTACCCTCAAGACTGTCGGTACCTTCAGCATCCAGAACAACCGTGATCTG
AAGACCATCAACATCAACAACCTCATGAACGCCACCGACTTGATCAGCTTCTCGGGTAACTACGATACCCTCGAG
GTCGATCTTCCCAACCTCGGCACCGGTACCAACATGACCTTCCAGAACATCTCCTCGGTCTCCCTGCCTTCCCTT
GAGAAGCTTACCGGTCAGCTCGGCTTCTGGGGTACCAAGTTCGAGACTTTCTCCGCTCCCAACCTTACCCAGACC
GGTGACTTGATCTTCAAGGACAACACCAAGCTGTCCAACATCAGCATGCCCGTTCTGAAGACTGTTGACGGTGGA
TTCACCATTGCCCGTGATGACAAGCTCTCCACCATCAGCCTGCCCATGCTCCAGCGTGTTAACGGTGCCATTGAC
TTCAGCGGTACCTTCAACAAGTGAGTATCCTTCCCATAGCTCTATCTGTGCACATACTAACAACCAATAGGCTTT
CTCTTGGTGCTCTCAAGGACGTCGAGGGTAGCTTCAACATGCAGAGCACCCGCGGTAACTTCAGCTGCGACGATC
TCCGCAAGCTGAAGAGCGACGATGTCATCAAGGGTACCTTCAAGTGTGATGCCACCAACGCCAACGCCACCACTT
CCACCGGCACTTCTGGCTCCTCTACCTCTTCCAGCTCCACCACCTCTGCTGCTACCAGCTCCGGTGCTGCCTTCA
TGACCGGCGCCAACGTTCCCGTTGTTGGTATTGCTGCCGTCTTCGGTGCTCTTGCCCAGCTTCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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