© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g7210.t1 |
| Gene name | |
| Location | scaffold_21:343422..344697 |
| Strand | - |
| Gene length (bp) | 1275 |
| Transcript length (bp) | 855 |
| Coding sequence length (bp) | 855 |
| Protein length (aa) | 285 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01459 | Porin_3 | Eukaryotic porin | 1.2E-73 | 3 | 277 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0005741 | mitochondrial outer membrane | Yes |
| GO:0019867 | outer membrane | No |
| GO:0008150 | biological_process | No |
| GO:0016020 | membrane | No |
| GO:0031966 | mitochondrial membrane | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0098588 | bounding membrane of organelle | No |
| GO:0031090 | organelle membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0031968 | organelle outer membrane | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 14 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g7210.t1 MSAPAAFSDIAKATNDLLNKDFYHGAAANLEVKSKAPNGVTFTVKGKSAHEGPIAGQLEAKYVDAPTGLTLTQAW TTANALDTKLELDNNIAKGLKAEILTQYQPAKQSKGAKLNLYFKQPNLNARAFFDLLNGPSANFDAVLGHEGFLV GAEGGYDVNKAAITKYSAAVGYSVAQYSAAITASNNLSLFSASYYHRVNAQVEAGAKASWDSTSGNAVGLEVASK YRLDPSSFAKAKINDRGIAALAYNVLLRPGVTLGLGASFDTQNLNQAAHKVGASFTFES* |
| Coding | >Pro_DTO377G3_2|g7210.t1 ATGTCTGCCCCAGCTGCTTTCTCCGATATCGCCAAGGCGACCAACGATCTCTTGAACAAGGACTTCTACCACGGC GCTGCCGCCAACCTTGAGGTCAAGTCCAAGGCTCCCAACGGTGTCACCTTCACCGTTAAGGGAAAGTCTGCTCAC GAGGGCCCCATTGCTGGTCAGCTCGAGGCCAAATACGTTGATGCGCCCACTGGCCTCACCCTCACCCAGGCTTGG ACCACCGCCAACGCTCTCGACACCAAGCTCGAGCTCGACAACAACATCGCCAAGGGCCTCAAGGCTGAGATCCTT ACCCAGTACCAGCCCGCTAAGCAGTCCAAGGGTGCTAAGCTCAACCTGTACTTCAAGCAGCCCAACCTGAACGCC CGTGCCTTCTTCGATCTGCTGAACGGCCCCTCCGCCAACTTCGACGCCGTTCTCGGCCACGAGGGCTTCCTCGTC GGTGCTGAGGGTGGTTACGACGTCAACAAGGCCGCCATCACCAAGTACTCCGCTGCCGTCGGCTACAGTGTTGCC CAGTACTCCGCTGCCATCACTGCCAGCAACAACCTGTCCCTTTTCTCCGCCAGCTACTACCACCGCGTCAACGCT CAGGTTGAGGCCGGTGCCAAGGCTTCTTGGGACTCCACATCCGGCAACGCCGTCGGCCTCGAGGTCGCCAGCAAG TACCGCCTGGACCCCTCTTCCTTCGCTAAGGCCAAGATCAACGACCGTGGTATTGCCGCTCTGGCTTACAACGTC CTGCTCCGCCCTGGTGTCACCCTCGGCCTCGGTGCTTCCTTCGATACCCAGAACCTGAACCAGGCTGCCCACAAG GTCGGCGCCAGCTTCACCTTCGAGTCTTAA |
| Transcript | >Pro_DTO377G3_2|g7210.t1 ATGTCTGCCCCAGCTGCTTTCTCCGATATCGCCAAGGCGACCAACGATCTCTTGAACAAGGACTTCTACCACGGC GCTGCCGCCAACCTTGAGGTCAAGTCCAAGGCTCCCAACGGTGTCACCTTCACCGTTAAGGGAAAGTCTGCTCAC GAGGGCCCCATTGCTGGTCAGCTCGAGGCCAAATACGTTGATGCGCCCACTGGCCTCACCCTCACCCAGGCTTGG ACCACCGCCAACGCTCTCGACACCAAGCTCGAGCTCGACAACAACATCGCCAAGGGCCTCAAGGCTGAGATCCTT ACCCAGTACCAGCCCGCTAAGCAGTCCAAGGGTGCTAAGCTCAACCTGTACTTCAAGCAGCCCAACCTGAACGCC CGTGCCTTCTTCGATCTGCTGAACGGCCCCTCCGCCAACTTCGACGCCGTTCTCGGCCACGAGGGCTTCCTCGTC GGTGCTGAGGGTGGTTACGACGTCAACAAGGCCGCCATCACCAAGTACTCCGCTGCCGTCGGCTACAGTGTTGCC CAGTACTCCGCTGCCATCACTGCCAGCAACAACCTGTCCCTTTTCTCCGCCAGCTACTACCACCGCGTCAACGCT CAGGTTGAGGCCGGTGCCAAGGCTTCTTGGGACTCCACATCCGGCAACGCCGTCGGCCTCGAGGTCGCCAGCAAG TACCGCCTGGACCCCTCTTCCTTCGCTAAGGCCAAGATCAACGACCGTGGTATTGCCGCTCTGGCTTACAACGTC CTGCTCCGCCCTGGTGTCACCCTCGGCCTCGGTGCTTCCTTCGATACCCAGAACCTGAACCAGGCTGCCCACAAG GTCGGCGCCAGCTTCACCTTCGAGTCTTAA |
| Gene | >Pro_DTO377G3_2|g7210.t1 ATGTCTGCCCCAGCTGCTTTCTCCGATATCGCCAAGGCGACCAACGATGTACGCACAACTGTTGGGGACAAAACT CGGAACCTTGGCTAATACCTAATCCCAATAGCTCTTGAACAAGGACTTCTACCACGGCGCTGCCGGTACGTTTCT GCATGGCATTGCGCCACTCATTGAAGATTAAATAGCTAATCAAAGCTTTTAGCCAACCTTGAGGTCAAGTCCAAG GCTCCCAACGGTGTCACCTTCACCGTTAAGGGAAAGTCTGCTCACGAGGGCCCCATTGCTGGTCAGGTTAGTTGC AAAGCTATTTCTGAATCCAGTCATGCAAATTACTAACTAGTGCGCCTATAGCTCGAGGCCAAATACGTTGATGCG CCCACTGGTAAACGCCCCCTCCAGAAGAAACCTCCAGATCCCGGCGCGCACAAGGCCCGTCTTATGTCATTGATG TTGGGATGCGGTATTCCAATAGCGCGCCGGGTGAACTTATTTATTTTTTCCGATGCCAAGATACACAGGATTAGG CTAATATGCTCACTCCGACCAGGCCTCACCCTCACCCAGGCTTGGACCACCGCCAACGCTCTCGACACCAAGCTC GAGCTCGACAACAACATCGCCAAGGGCCTCAAGGCTGAGATCCTTACCCAGTACCAGCCCGCTAAGCAGTCCAAG GGTGCTAAGCTCAACCTGTACTTCAAGCAGCCCAACCTGAACGCCCGTGCCTTCTTCGATCTGCTGAACGGCCCC TCCGCCAACTTCGACGCCGTTCTCGGCCACGAGGGCTTCCTCGTCGGTGCTGAGGGTGGTTACGACGTCAACAAG GCCGCCATCACCAAGTACTCCGCTGCCGTCGGCTACAGTGTTGCCCAGTACTCCGCTGCCATCACTGCCAGCAAC AACCTGTCCCTTTTCTCCGCCAGCTACTACCACCGCGTCAACGCTCAGGTTGAGGCCGGTGCCAAGGCTTCTTGG GACTCCACATCCGGCAACGCCGTCGGCCTCGAGGTCGCCAGCAAGTACCGCCTGGACCCCTCTTCCTTCGCTAAG GTTCGTTTCACGCGGTTAAACTGCTTATATAACTATGTAGATCACGACTAATCGCGCAATTTTCTCGCAATTTAG GCCAAGATCAACGACCGTGGTATTGCCGCTCTGGCTTACAACGTCCTGCTCCGCCCTGGTGTCACCCTCGGCCTC GGTGCTTCCTTCGATACCCAGAACCTGAACCAGGCTGCCCACAAGGTCGGCGCCAGCTTCACCTTCGAGTCTTAA |