Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7208.t1
Gene name
Locationscaffold_21:339396..340653
Strand-
Gene length (bp)1257
Transcript length (bp)1257
Coding sequence length (bp)1257
Protein length (aa) 419

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12796 Ank_2 Ankyrin repeats (3 copies) 7.7E-08 56 150
PF00023 Ank Ankyrin repeat 1.5E-02 191 223
PF00023 Ank Ankyrin repeat 1.5E-02 333 356
PF00646 F-box F-box domain 1.3E-06 3 40
PF12937 F-box-like F-box-like 1.5E-05 5 46

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7208.t1
MTTLSELPNEMLLEISLHLDYRDLNAFTRVSRHFHALSNRNLYKAIAKDSPGKSIAWAAEKGKEASARKLLQMCG
SKILDDLPIFEGQEPIRIAAWKGHTNIVELFLPYCIQHDTEKEGDLFNRTLKAAVTSEHAAVVKLLLEHKADCKT
NSHDRHAAIPLCKAVELGHVSIVRLFLEYNYCSLDTYDLRGMTPLAVAAATRPSPANLEIAQLLVGAGADLYIYD
KLLLEAAGSDNLPVMKLLLANNLHWRQLGWLEVLWEFSRPRDNHEMGSLLLSWIDVDRILKYGNLQRCYLLKGAI
VNRLDDLLEKVLKESSVLDKDHQPNRRAVHFCPLSLAVCYGRPRAVKLLLDHGADPSGEGNSRPVQLALEKGKDT
MARLLFDKGATFDPDMCFGSSEYRQLLKLRMARVQRRPVSQEL*
Coding >Pro_DTO377G3_2|g7208.t1
ATGACGACTCTTTCAGAGCTCCCTAATGAGATGCTGCTGGAGATATCCCTCCACCTTGACTACCGTGACCTCAAT
GCATTCACACGGGTCAGCCGCCACTTCCATGCTCTGTCAAACAGGAATCTTTACAAAGCCATCGCCAAAGACTCA
CCTGGGAAGTCGATAGCCTGGGCAGCCGAAAAAGGCAAGGAAGCTAGTGCGCGGAAACTGTTGCAGATGTGCGGC
TCGAAGATATTGGACGACCTTCCCATCTTCGAAGGACAAGAACCAATAAGGATTGCAGCGTGGAAGGGACACACC
AATATTGTTGAATTGTTCCTACCCTACTGCATTCAACATGACACCGAGAAAGAAGGAGATCTATTCAACAGGACA
CTCAAGGCTGCAGTCACAAGCGAGCATGCTGCAGTAGTCAAACTGCTCCTCGAACACAAGGCCGATTGCAAAACC
AACAGCCACGATAGACATGCTGCAATTCCTTTATGCAAGGCCGTCGAACTGGGACATGTATCAATTGTCAGACTC
TTCCTCGAATATAATTATTGCAGCCTCGATACCTATGACCTGCGTGGTATGACGCCTCTAGCGGTAGCTGCTGCT
ACAAGACCTTCACCCGCAAATCTGGAGATTGCCCAACTCTTAGTAGGGGCTGGTGCAGATTTGTATATATATGAC
AAACTGTTACTCGAAGCCGCGGGATCAGACAACCTCCCCGTCATGAAGCTCCTCCTAGCGAACAACCTTCATTGG
CGGCAATTGGGATGGTTGGAAGTCTTGTGGGAATTCTCTCGACCAAGGGACAACCACGAGATGGGGTCATTGCTG
CTAAGCTGGATTGATGTGGATCGCATATTGAAGTACGGTAATCTTCAACGTTGCTATCTCTTAAAGGGGGCGATT
GTGAACCGCCTTGACGATCTTTTAGAGAAGGTATTGAAAGAGTCGTCCGTCCTTGATAAAGACCATCAACCAAAC
CGAAGGGCAGTCCATTTCTGTCCTTTGAGTTTGGCTGTCTGCTATGGCCGCCCTAGGGCTGTTAAGCTCTTACTA
GACCATGGTGCTGACCCTAGTGGTGAAGGCAACTCTCGACCGGTACAATTAGCCCTCGAAAAAGGAAAGGATACA
ATGGCGAGGCTGCTTTTTGACAAAGGAGCCACATTTGACCCGGATATGTGTTTTGGGTCATCCGAATACCGTCAA
TTATTGAAGCTTCGTATGGCTCGGGTGCAAAGGAGACCTGTTAGTCAAGAACTATAG
Transcript >Pro_DTO377G3_2|g7208.t1
ATGACGACTCTTTCAGAGCTCCCTAATGAGATGCTGCTGGAGATATCCCTCCACCTTGACTACCGTGACCTCAAT
GCATTCACACGGGTCAGCCGCCACTTCCATGCTCTGTCAAACAGGAATCTTTACAAAGCCATCGCCAAAGACTCA
CCTGGGAAGTCGATAGCCTGGGCAGCCGAAAAAGGCAAGGAAGCTAGTGCGCGGAAACTGTTGCAGATGTGCGGC
TCGAAGATATTGGACGACCTTCCCATCTTCGAAGGACAAGAACCAATAAGGATTGCAGCGTGGAAGGGACACACC
AATATTGTTGAATTGTTCCTACCCTACTGCATTCAACATGACACCGAGAAAGAAGGAGATCTATTCAACAGGACA
CTCAAGGCTGCAGTCACAAGCGAGCATGCTGCAGTAGTCAAACTGCTCCTCGAACACAAGGCCGATTGCAAAACC
AACAGCCACGATAGACATGCTGCAATTCCTTTATGCAAGGCCGTCGAACTGGGACATGTATCAATTGTCAGACTC
TTCCTCGAATATAATTATTGCAGCCTCGATACCTATGACCTGCGTGGTATGACGCCTCTAGCGGTAGCTGCTGCT
ACAAGACCTTCACCCGCAAATCTGGAGATTGCCCAACTCTTAGTAGGGGCTGGTGCAGATTTGTATATATATGAC
AAACTGTTACTCGAAGCCGCGGGATCAGACAACCTCCCCGTCATGAAGCTCCTCCTAGCGAACAACCTTCATTGG
CGGCAATTGGGATGGTTGGAAGTCTTGTGGGAATTCTCTCGACCAAGGGACAACCACGAGATGGGGTCATTGCTG
CTAAGCTGGATTGATGTGGATCGCATATTGAAGTACGGTAATCTTCAACGTTGCTATCTCTTAAAGGGGGCGATT
GTGAACCGCCTTGACGATCTTTTAGAGAAGGTATTGAAAGAGTCGTCCGTCCTTGATAAAGACCATCAACCAAAC
CGAAGGGCAGTCCATTTCTGTCCTTTGAGTTTGGCTGTCTGCTATGGCCGCCCTAGGGCTGTTAAGCTCTTACTA
GACCATGGTGCTGACCCTAGTGGTGAAGGCAACTCTCGACCGGTACAATTAGCCCTCGAAAAAGGAAAGGATACA
ATGGCGAGGCTGCTTTTTGACAAAGGAGCCACATTTGACCCGGATATGTGTTTTGGGTCATCCGAATACCGTCAA
TTATTGAAGCTTCGTATGGCTCGGGTGCAAAGGAGACCTGTTAGTCAAGAACTATAG
Gene >Pro_DTO377G3_2|g7208.t1
ATGACGACTCTTTCAGAGCTCCCTAATGAGATGCTGCTGGAGATATCCCTCCACCTTGACTACCGTGACCTCAAT
GCATTCACACGGGTCAGCCGCCACTTCCATGCTCTGTCAAACAGGAATCTTTACAAAGCCATCGCCAAAGACTCA
CCTGGGAAGTCGATAGCCTGGGCAGCCGAAAAAGGCAAGGAAGCTAGTGCGCGGAAACTGTTGCAGATGTGCGGC
TCGAAGATATTGGACGACCTTCCCATCTTCGAAGGACAAGAACCAATAAGGATTGCAGCGTGGAAGGGACACACC
AATATTGTTGAATTGTTCCTACCCTACTGCATTCAACATGACACCGAGAAAGAAGGAGATCTATTCAACAGGACA
CTCAAGGCTGCAGTCACAAGCGAGCATGCTGCAGTAGTCAAACTGCTCCTCGAACACAAGGCCGATTGCAAAACC
AACAGCCACGATAGACATGCTGCAATTCCTTTATGCAAGGCCGTCGAACTGGGACATGTATCAATTGTCAGACTC
TTCCTCGAATATAATTATTGCAGCCTCGATACCTATGACCTGCGTGGTATGACGCCTCTAGCGGTAGCTGCTGCT
ACAAGACCTTCACCCGCAAATCTGGAGATTGCCCAACTCTTAGTAGGGGCTGGTGCAGATTTGTATATATATGAC
AAACTGTTACTCGAAGCCGCGGGATCAGACAACCTCCCCGTCATGAAGCTCCTCCTAGCGAACAACCTTCATTGG
CGGCAATTGGGATGGTTGGAAGTCTTGTGGGAATTCTCTCGACCAAGGGACAACCACGAGATGGGGTCATTGCTG
CTAAGCTGGATTGATGTGGATCGCATATTGAAGTACGGTAATCTTCAACGTTGCTATCTCTTAAAGGGGGCGATT
GTGAACCGCCTTGACGATCTTTTAGAGAAGGTATTGAAAGAGTCGTCCGTCCTTGATAAAGACCATCAACCAAAC
CGAAGGGCAGTCCATTTCTGTCCTTTGAGTTTGGCTGTCTGCTATGGCCGCCCTAGGGCTGTTAAGCTCTTACTA
GACCATGGTGCTGACCCTAGTGGTGAAGGCAACTCTCGACCGGTACAATTAGCCCTCGAAAAAGGAAAGGATACA
ATGGCGAGGCTGCTTTTTGACAAAGGAGCCACATTTGACCCGGATATGTGTTTTGGGTCATCCGAATACCGTCAA
TTATTGAAGCTTCGTATGGCTCGGGTGCAAAGGAGACCTGTTAGTCAAGAACTATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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