Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7183.t1
Gene name
Locationscaffold_21:272017..274132
Strand+
Gene length (bp)2115
Transcript length (bp)1974
Coding sequence length (bp)1974
Protein length (aa) 658

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09531 Ndc1_Nup Nucleoporin protein Ndc1-Nup 9.4E-193 16 646

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.5

Transmembrane Domains

Domain # Start End Length
1 21 40 19
2 50 72 22
3 93 115 22
4 216 238 22
5 259 281 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7183.t1
MAVVQTRPYRRILTSALHRRFVHASALSLLVSYIIAIAIGEKSSFFWLWFPFGGCGVRTVLLFISSLTIFVLRVS
QMHIGSRTASSSFGTLTSFTLLQIAQTFGWYIFSAWWFTLIYVWSSSSDSNLELVKRGRPHERPTLNERPIYLHS
FHMFLACVQAVFHLYYDYDRIALPIAEQSSRTNDERTHPVPPTSKFLQGTLLRELAAGALRSVTVATASLVVYPI
FFRSFAWSWSLYFAKLFWSFPRSAAEPQSFIPSIFPYFFFGTLVPGVLLVLSWQTANLFYSVFIGKEPLKRGQPL
TTEAKDPNGSLLSGLKAKKEVVKTFALWELSLISQRVPDRRKAIFNEIDREGGSTWSQVLACTTNVIKAINTRIE
ESKNPAPVTKPLPQAERSEPILQTLPRLSEPIKDDHIFTTAPKATSRQDKFGDAFSSAAKSIGQSEDWTPTARAR
VRDVFDRASSAMLSPEQKQKYLASAQKFKLLTGGPSTTHKPEDMNPILAQILRSPIGQPFRQTYAQRLSAIVLGT
PESSLSLIVDAVESLTRLLVASLAEDPYGKAQADVPLAVRLLTQTTLTLDAFAHQGGLHAHWTDINFPPSSDPQA
QAVARLVPDVEIVLATLRGGLKDLLTAFRPYLRDIGIAGKDLRLAKEAAGIDGEAVL*
Coding >Pro_DTO377G3_2|g7183.t1
ATGGCTGTTGTTCAAACTCGGCCGTACAGGCGAATTTTGACTTCGGCCTTGCACCGAAGATTTGTCCATGCATCT
GCACTTTCACTTCTGGTCTCTTATATCATCGCAATTGCGATCGGAGAGAAATCGTCCTTTTTCTGGCTATGGTTT
CCCTTTGGTGGTTGCGGTGTTCGAACTGTGCTACTTTTCATATCTTCGCTCACCATTTTTGTTCTCCGCGTCAGT
CAAATGCACATCGGCTCGAGAACAGCTAGCTCCTCGTTCGGCACCTTGACATCCTTCACTCTGTTACAAATCGCG
CAAACCTTCGGCTGGTACATCTTTTCGGCATGGTGGTTCACTCTGATTTATGTATGGTCGTCTTCGAGTGATTCC
AACCTCGAGCTTGTGAAACGGGGCAGGCCACACGAGCGACCGACCCTGAACGAAAGGCCGATTTACCTTCATTCC
TTCCATATGTTTCTAGCATGCGTGCAAGCAGTGTTCCACCTCTACTACGACTACGACCGCATTGCATTGCCCATC
GCGGAGCAAAGCTCCAGAACAAATGACGAGCGTACCCATCCAGTACCGCCAACCTCCAAGTTTCTACAGGGTACT
CTGCTGCGAGAATTGGCAGCCGGGGCTCTCAGAAGCGTTACTGTTGCTACAGCGTCTCTCGTGGTATACCCCATA
TTTTTCAGAAGCTTTGCTTGGAGCTGGTCTTTGTACTTTGCCAAGCTCTTTTGGAGCTTCCCGAGATCTGCAGCC
GAGCCTCAAAGCTTCATTCCCTCGATTTTCCCCTACTTCTTCTTTGGAACCTTGGTCCCCGGAGTGTTGCTTGTC
CTCTCCTGGCAAACCGCCAACCTCTTCTATTCTGTGTTCATCGGCAAGGAGCCTTTGAAGCGGGGCCAGCCACTC
ACAACAGAAGCCAAGGATCCCAATGGCAGTCTTCTTAGTGGCCTCAAGGCGAAGAAGGAAGTTGTCAAGACTTTC
GCGCTCTGGGAGCTCAGTCTCATTAGCCAGCGCGTTCCGGACCGCCGAAAGGCAATTTTCAATGAAATTGATCGC
GAGGGTGGTTCGACTTGGTCCCAAGTTCTTGCTTGCACTACCAATGTAATCAAGGCCATCAACACTCGCATCGAG
GAAAGCAAAAATCCCGCGCCTGTTACCAAGCCCTTACCGCAAGCCGAGAGATCCGAGCCTATTCTTCAAACTCTC
CCGCGACTTTCGGAACCGATCAAAGATGACCACATCTTTACTACTGCCCCGAAGGCTACTTCACGTCAGGACAAA
TTTGGCGATGCATTTAGCTCGGCGGCTAAATCAATCGGTCAGTCAGAAGACTGGACTCCAACTGCGCGAGCCCGA
GTTCGTGATGTTTTCGACCGGGCATCATCAGCAATGCTTAGCCCTGAGCAAAAACAGAAATATCTCGCCTCTGCG
CAGAAGTTCAAGCTACTTACCGGCGGTCCCTCCACAACTCATAAACCCGAGGACATGAATCCAATTCTGGCACAG
ATTCTTCGTTCGCCTATCGGCCAACCTTTCCGTCAAACATACGCTCAACGCCTCTCTGCTATTGTTCTTGGCACA
CCAGAGTCCTCTTTATCCTTGATTGTGGATGCCGTAGAGTCCTTGACTCGACTCCTCGTTGCCAGCTTGGCCGAA
GATCCATATGGCAAAGCTCAGGCCGATGTACCCTTAGCCGTGCGACTTTTGACCCAAACTACTCTCACCCTGGAT
GCATTTGCCCACCAGGGTGGATTGCATGCGCACTGGACCGATATCAATTTCCCGCCATCGAGCGATCCCCAGGCG
CAAGCAGTTGCCCGTTTAGTTCCAGATGTTGAAATCGTGCTTGCTACACTTCGTGGTGGTCTCAAGGATCTACTG
ACGGCCTTCAGACCTTACTTGCGGGATATCGGTATCGCAGGCAAGGATTTGAGGCTCGCAAAGGAGGCAGCTGGC
ATCGACGGGGAGGCGGTGTTATGA
Transcript >Pro_DTO377G3_2|g7183.t1
ATGGCTGTTGTTCAAACTCGGCCGTACAGGCGAATTTTGACTTCGGCCTTGCACCGAAGATTTGTCCATGCATCT
GCACTTTCACTTCTGGTCTCTTATATCATCGCAATTGCGATCGGAGAGAAATCGTCCTTTTTCTGGCTATGGTTT
CCCTTTGGTGGTTGCGGTGTTCGAACTGTGCTACTTTTCATATCTTCGCTCACCATTTTTGTTCTCCGCGTCAGT
CAAATGCACATCGGCTCGAGAACAGCTAGCTCCTCGTTCGGCACCTTGACATCCTTCACTCTGTTACAAATCGCG
CAAACCTTCGGCTGGTACATCTTTTCGGCATGGTGGTTCACTCTGATTTATGTATGGTCGTCTTCGAGTGATTCC
AACCTCGAGCTTGTGAAACGGGGCAGGCCACACGAGCGACCGACCCTGAACGAAAGGCCGATTTACCTTCATTCC
TTCCATATGTTTCTAGCATGCGTGCAAGCAGTGTTCCACCTCTACTACGACTACGACCGCATTGCATTGCCCATC
GCGGAGCAAAGCTCCAGAACAAATGACGAGCGTACCCATCCAGTACCGCCAACCTCCAAGTTTCTACAGGGTACT
CTGCTGCGAGAATTGGCAGCCGGGGCTCTCAGAAGCGTTACTGTTGCTACAGCGTCTCTCGTGGTATACCCCATA
TTTTTCAGAAGCTTTGCTTGGAGCTGGTCTTTGTACTTTGCCAAGCTCTTTTGGAGCTTCCCGAGATCTGCAGCC
GAGCCTCAAAGCTTCATTCCCTCGATTTTCCCCTACTTCTTCTTTGGAACCTTGGTCCCCGGAGTGTTGCTTGTC
CTCTCCTGGCAAACCGCCAACCTCTTCTATTCTGTGTTCATCGGCAAGGAGCCTTTGAAGCGGGGCCAGCCACTC
ACAACAGAAGCCAAGGATCCCAATGGCAGTCTTCTTAGTGGCCTCAAGGCGAAGAAGGAAGTTGTCAAGACTTTC
GCGCTCTGGGAGCTCAGTCTCATTAGCCAGCGCGTTCCGGACCGCCGAAAGGCAATTTTCAATGAAATTGATCGC
GAGGGTGGTTCGACTTGGTCCCAAGTTCTTGCTTGCACTACCAATGTAATCAAGGCCATCAACACTCGCATCGAG
GAAAGCAAAAATCCCGCGCCTGTTACCAAGCCCTTACCGCAAGCCGAGAGATCCGAGCCTATTCTTCAAACTCTC
CCGCGACTTTCGGAACCGATCAAAGATGACCACATCTTTACTACTGCCCCGAAGGCTACTTCACGTCAGGACAAA
TTTGGCGATGCATTTAGCTCGGCGGCTAAATCAATCGGTCAGTCAGAAGACTGGACTCCAACTGCGCGAGCCCGA
GTTCGTGATGTTTTCGACCGGGCATCATCAGCAATGCTTAGCCCTGAGCAAAAACAGAAATATCTCGCCTCTGCG
CAGAAGTTCAAGCTACTTACCGGCGGTCCCTCCACAACTCATAAACCCGAGGACATGAATCCAATTCTGGCACAG
ATTCTTCGTTCGCCTATCGGCCAACCTTTCCGTCAAACATACGCTCAACGCCTCTCTGCTATTGTTCTTGGCACA
CCAGAGTCCTCTTTATCCTTGATTGTGGATGCCGTAGAGTCCTTGACTCGACTCCTCGTTGCCAGCTTGGCCGAA
GATCCATATGGCAAAGCTCAGGCCGATGTACCCTTAGCCGTGCGACTTTTGACCCAAACTACTCTCACCCTGGAT
GCATTTGCCCACCAGGGTGGATTGCATGCGCACTGGACCGATATCAATTTCCCGCCATCGAGCGATCCCCAGGCG
CAAGCAGTTGCCCGTTTAGTTCCAGATGTTGAAATCGTGCTTGCTACACTTCGTGGTGGTCTCAAGGATCTACTG
ACGGCCTTCAGACCTTACTTGCGGGATATCGGTATCGCAGGCAAGGATTTGAGGCTCGCAAAGGAGGCAGCTGGC
ATCGACGGGGAGGCGGTGTTATGA
Gene >Pro_DTO377G3_2|g7183.t1
ATGGCTGTTGTTCAAACTCGGCCGTACAGGCGAATTTTGACTTCGGCCTTGCACCGAAGATTTGTCCATGCATCT
GCACTTTCACTTCTGGTCTCTTATATCATCGCAATTGCGATCGGAGAGAAATCGTCCTGTGAGTACATCGCAACC
TTATTGGGTCGAGCCTCGAAGGCTCAGCTTCAAGTCCTGAAAGTACAAAGAACTGATAAAACTATCCTATGCAGT
TTTCTGGCTATGGTTTCCCTTTGGTGGTTGCGGTGTTCGAACTGTGCTACTTTTCATATCTTCGCTCACCATTTT
TGTTCTCCGCGTCAGTCAAATGCACATCGGCTCGAGAACAGCTAGCTCCTCGTTCGGCACCTTGACATCCTTCAC
TCTGTTACAAATCGCGCAAACCTTCGGCTGGTACATCTTTTCGGCATGGTGGTTCACTCTGATTTATGTATGGTC
GTCTTCGAGTGATTCCAACCTCGAGCTTGTGAAACGGGGCAGGTGCGTTGAAAATCCTTCAAATGACTGCGATCG
GGACTAATGAGATACAGGCCACACGAGCGACCGACCCTGAACGAAAGGCCGATTTACCTTCATTCCTTCCATATG
TTTCTAGCATGCGTGCAAGCAGTGTTCCACCTCTACTACGACTACGACCGCATTGCATTGCCCATCGCGGAGCAA
AGCTCCAGAACAAATGACGAGCGTACCCATCCAGTACCGCCAACCTCCAAGTTTCTACAGGGTACTCTGCTGCGA
GAATTGGCAGCCGGGGCTCTCAGAAGCGTTACTGTTGCTACAGCGTCTCTCGTGGTATACCCCATATTTTTCAGA
AGCTTTGCTTGGAGCTGGTCTTTGTACTTTGCCAAGCTCTTTTGGAGCTTCCCGAGATCTGCAGCCGAGCCTCAA
AGCTTCATTCCCTCGATTTTCCCCTACTTCTTCTTTGGAACCTTGGTCCCCGGAGTGTTGCTTGTCCTCTCCTGG
CAAACCGCCAACCTCTTCTATTCTGTGTTCATCGGCAAGGAGCCTTTGAAGCGGGGCCAGCCACTCACAACAGAA
GCCAAGGATCCCAATGGCAGTCTTCTTAGTGGCCTCAAGGCGAAGAAGGAAGTTGTCAAGACTTTCGCGCTCTGG
GAGCTCAGTCTCATTAGCCAGCGCGTTCCGGACCGCCGAAAGGCAATTTTCAATGAAATTGATCGCGAGGGTGGT
TCGACTTGGTCCCAAGTTCTTGCTTGCACTACCAATGTAATCAAGGCCATCAACACTCGCATCGAGGAAAGCAAA
AATCCCGCGCCTGTTACCAAGCCCTTACCGCAAGCCGAGAGATCCGAGCCTATTCTTCAAACTCTCCCGCGACTT
TCGGAACCGATCAAAGATGACCACATCTTTACTACTGCCCCGAAGGCTACTTCACGTCAGGACAAATTTGGCGAT
GCATTTAGCTCGGCGGCTAAATCAATCGGTCAGTCAGAAGACTGGACTCCAACTGCGCGAGCCCGAGTTCGTGAT
GTTTTCGACCGGGCATCATCAGCAATGCTTAGCCCTGAGCAAAAACAGAAATATCTCGCCTCTGCGCAGAAGTTC
AAGCTACTTACCGGCGGTCCCTCCACAACTCATAAACCCGAGGACATGAATCCAATTCTGGCACAGATTCTTCGT
TCGCCTATCGGCCAACCTTTCCGTCAAACATACGCTCAACGCCTCTCTGCTATTGTTCTTGGCACACCAGAGTCC
TCTTTATCCTTGATTGTGGATGCCGTAGAGTCCTTGACTCGACTCCTCGTTGCCAGCTTGGCCGAAGATCCATAT
GGCAAAGCTCAGGCCGATGTACCCTTAGCCGTGCGACTTTTGACCCAAACTACTCTCACCCTGGATGCATTTGCC
CACCAGGGTGGATTGCATGCGCACTGGACCGATATCAATTTCCCGCCATCGAGCGATCCCCAGGCGCAAGCAGTT
GCCCGTTTAGTTCCAGATGTTGAAATCGTGCTTGCTACACTTCGTGGTGGTCTCAAGGATCTACTGACGGCCTTC
AGACCTTACTTGCGGGATATCGGTATCGCAGGCAAGGATTTGAGGCTCGCAAAGGAGGCAGCTGGCATCGACGGG
GAGGCGGTGTTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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