Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7182.t1
Gene name
Locationscaffold_21:270692..271523
Strand-
Gene length (bp)831
Transcript length (bp)771
Coding sequence length (bp)771
Protein length (aa) 257

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14523 Syntaxin_2 Syntaxin-like protein 1.9E-26 22 119
PF05739 SNARE SNARE domain 5.8E-12 199 250
PF00804 Syntaxin Syntaxin 7.7E-07 48 197

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 236 255 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7182.t1
MRRAEDPQYRDDPDFDHLAEQLSDQLFTLTSNISRLSNQIALLGTKRDTERVRERVHNLLEETRTGFRDVGEGIK
QVQTWEDVNPSQKWTQQKLSSEFKATLDEFQTIQRRALEKQRASAVAARTAIEGGEQPSADNDVQLQEQLLEEQH
RMANQGEVDFQESLIIEREAEIRNIEQSVGELNELFRDVAHIVTEQGGQLDIISENVQNVTQDTRGANVELRSAS
RYQKNARNRACCLFVILAVILAIIVLAIVLG*
Coding >Pro_DTO377G3_2|g7182.t1
ATGCGCAGGGCTGAAGACCCGCAATACCGTGACGATCCGGACTTCGACCATCTGGCCGAGCAGCTCTCAGATCAG
CTATTTACCTTGACATCGAACATCTCTCGCCTATCCAACCAAATTGCCCTTCTTGGAACCAAACGCGATACAGAG
CGTGTGCGCGAGCGAGTTCATAATCTGCTTGAAGAGACCCGCACCGGGTTTAGGGATGTAGGAGAAGGGATTAAA
CAGGTCCAGACATGGGAGGACGTCAATCCCTCCCAGAAATGGACACAGCAGAAGCTATCGTCCGAATTCAAGGCC
ACCTTGGATGAGTTCCAAACTATTCAGCGTCGTGCACTCGAGAAACAGCGCGCTTCTGCAGTTGCTGCCCGTACA
GCTATCGAAGGAGGCGAGCAACCGTCTGCCGACAACGATGTCCAATTACAAGAGCAGCTATTGGAGGAGCAACAC
CGTATGGCGAATCAGGGCGAGGTGGACTTCCAAGAGTCCTTGATCATCGAGCGTGAGGCAGAGATCCGGAACATT
GAACAAAGTGTGGGAGAGCTGAACGAGCTCTTCCGTGATGTCGCGCACATCGTTACGGAACAAGGAGGGCAGTTG
GATATCATCAGCGAGAATGTCCAAAATGTCACCCAGGACACACGAGGCGCCAATGTCGAATTGCGCAGTGCTAGC
AGATATCAGAAGAATGCGCGCAACAGAGCCTGCTGTCTCTTTGTGATTCTTGCTGTTATCCTTGCTATTATTGTG
CTTGCAATTGTCCTCGGATAG
Transcript >Pro_DTO377G3_2|g7182.t1
ATGCGCAGGGCTGAAGACCCGCAATACCGTGACGATCCGGACTTCGACCATCTGGCCGAGCAGCTCTCAGATCAG
CTATTTACCTTGACATCGAACATCTCTCGCCTATCCAACCAAATTGCCCTTCTTGGAACCAAACGCGATACAGAG
CGTGTGCGCGAGCGAGTTCATAATCTGCTTGAAGAGACCCGCACCGGGTTTAGGGATGTAGGAGAAGGGATTAAA
CAGGTCCAGACATGGGAGGACGTCAATCCCTCCCAGAAATGGACACAGCAGAAGCTATCGTCCGAATTCAAGGCC
ACCTTGGATGAGTTCCAAACTATTCAGCGTCGTGCACTCGAGAAACAGCGCGCTTCTGCAGTTGCTGCCCGTACA
GCTATCGAAGGAGGCGAGCAACCGTCTGCCGACAACGATGTCCAATTACAAGAGCAGCTATTGGAGGAGCAACAC
CGTATGGCGAATCAGGGCGAGGTGGACTTCCAAGAGTCCTTGATCATCGAGCGTGAGGCAGAGATCCGGAACATT
GAACAAAGTGTGGGAGAGCTGAACGAGCTCTTCCGTGATGTCGCGCACATCGTTACGGAACAAGGAGGGCAGTTG
GATATCATCAGCGAGAATGTCCAAAATGTCACCCAGGACACACGAGGCGCCAATGTCGAATTGCGCAGTGCTAGC
AGATATCAGAAGAATGCGCGCAACAGAGCCTGCTGTCTCTTTGTGATTCTTGCTGTTATCCTTGCTATTATTGTG
CTTGCAATTGTCCTCGGATAG
Gene >Pro_DTO377G3_2|g7182.t1
ATGCGCAGGGCTGAAGACCCGCAATACCGTGACGATCCGGACTTCGACCATCTGGCCGAGCAGCTCTCAGATCAG
CTATTTACCTTGACATCGAACATCTCTCGCCTATCCAACCAAATTGCCCTTCTTGGAACCAAACGCGATACAGAG
CGTGTGCGCGAGCGAGTTCATAATCTGCTTGAAGAGACCCGCACCGGGTTTAGGGATGTAGGAGAAGGGATTAAA
CAGGTCCAGACATGGGAGGACGTCAATGTATGATCCATCTAATTTTATCCACTAGCGAGAATTTCTTATTAACGT
CCCAACTTATAGCCCTCCCAGAAATGGACACAGCAGAAGCTATCGTCCGAATTCAAGGCCACCTTGGATGAGTTC
CAAACTATTCAGCGTCGTGCACTCGAGAAACAGCGCGCTTCTGCAGTTGCTGCCCGTACAGCTATCGAAGGAGGC
GAGCAACCGTCTGCCGACAACGATGTCCAATTACAAGAGCAGCTATTGGAGGAGCAACACCGTATGGCGAATCAG
GGCGAGGTGGACTTCCAAGAGTCCTTGATCATCGAGCGTGAGGCAGAGATCCGGAACATTGAACAAAGTGTGGGA
GAGCTGAACGAGCTCTTCCGTGATGTCGCGCACATCGTTACGGAACAAGGAGGGCAGTTGGATATCATCAGCGAG
AATGTCCAAAATGTCACCCAGGACACACGAGGCGCCAATGTCGAATTGCGCAGTGCTAGCAGATATCAGAAGAAT
GCGCGCAACAGAGCCTGCTGTCTCTTTGTGATTCTTGCTGTTATCCTTGCTATTATTGTGCTTGCAATTGTCCTC
GGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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