Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7169.t1
Gene name
Locationscaffold_21:239672..241364
Strand+
Gene length (bp)1692
Transcript length (bp)1533
Coding sequence length (bp)1533
Protein length (aa) 511

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00270 DEAD DEAD/DEAH box helicase 3.6E-14 29 196
PF00271 Helicase_C Helicase conserved C-terminal domain 1.5E-11 278 383
PF16124 RecQ_Zn_bind RecQ zinc-binding 1.3E-07 401 483

GO

GO Term Description Terminal node
GO:0005524 ATP binding Yes
GO:0003676 nucleic acid binding Yes
GO:0000166 nucleotide binding No
GO:0008144 drug binding No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0032553 ribonucleotide binding No
GO:0017076 purine nucleotide binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0097367 carbohydrate derivative binding No
GO:0030554 adenyl nucleotide binding No
GO:1901265 nucleoside phosphate binding No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0032559 adenyl ribonucleotide binding No
GO:0043168 anion binding No
GO:0032555 purine ribonucleotide binding No
GO:0036094 small molecule binding No
GO:0097159 organic cyclic compound binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7169.t1
MDRNPGLTRQISNMRWVLKHTFKKNDFRPLQREVVSSVIEGHDVFLQACTSFGKSMCYQLPAVLKDWGLTVVVCP
LLSLMTDQVNTLKALDVPVATINSNTTHEERQRVYEDMLCGHPSTRLLYVTPELCQTDNFRRRLLIVHKQGQLIR
VAIDEAHCISEWGHDFRPAYKELGWFRRNLVNPTVPITALTATATPRVRSDMINILGLDLETLRLFNTPSDRPNI
HYEVRYLADFAGDNDSAEDSQIQNLLGWLKGIQTRREARLGSEATRLPPMSGIVYVGTRAMAEHLANRLSYSSDY
MVTAVAYHAGVEARKRAHIQSTWKSSQPFQPAGGGRTPVFSIIVATNAFGMGIDNPDVRFVVHWTPPRSFESFVQ
ESGRAGRDGRAAASLVYYGIQERNFIENMIYRDSESHRAQAPENRDAKLESFGKVIRYCESIRRCRHELIKEFFG
DFELEEMGSQLPAREGVPVTSSSPCDFACDFCKEGRAGLAKRREKMASETQMALLYADFD*
Coding >Pro_DTO377G3_2|g7169.t1
ATGGATCGTAATCCGGGGCTTACGCGCCAAATTTCTAATATGCGATGGGTCTTGAAACATACCTTCAAAAAGAAT
GATTTCCGTCCACTTCAACGAGAGGTGGTCTCCTCCGTCATCGAAGGACATGATGTCTTCCTTCAAGCATGCACT
TCGTTTGGAAAAAGCATGTGTTATCAGCTGCCTGCAGTGCTCAAAGATTGGGGTTTGACTGTCGTCGTTTGTCCA
CTTCTTTCACTAATGACAGATCAAGTGAATACATTAAAAGCTCTTGATGTACCAGTCGCTACGATCAATTCCAAT
ACTACTCATGAGGAGAGACAACGAGTTTATGAGGACATGCTTTGCGGCCACCCGAGTACACGCCTGCTTTATGTC
ACGCCGGAGTTGTGCCAGACAGACAACTTCCGCCGCCGCCTTCTTATAGTTCACAAGCAAGGTCAGCTCATCCGC
GTTGCCATTGATGAGGCCCATTGCATAAGTGAATGGGGCCATGACTTCCGGCCAGCTTACAAAGAGCTGGGCTGG
TTCAGAAGGAATCTTGTCAATCCGACTGTCCCAATAACTGCATTGACAGCGACAGCAACTCCCCGAGTTCGCTCG
GACATGATCAACATTCTAGGATTGGATCTTGAAACCCTCCGGCTGTTCAATACTCCGTCGGACCGTCCAAACATT
CACTACGAGGTACGATATCTCGCTGACTTCGCTGGTGACAACGATAGCGCAGAAGACAGCCAGATACAAAACCTG
CTCGGATGGCTTAAGGGCATCCAAACCCGACGAGAGGCCCGACTTGGCAGCGAAGCAACACGGCTCCCCCCAATG
TCAGGAATCGTATATGTAGGGACCCGAGCTATGGCTGAACATCTTGCCAACCGGTTATCCTATTCCTCGGACTAT
ATGGTCACGGCAGTGGCATACCACGCCGGCGTGGAAGCCAGAAAGCGCGCGCACATTCAATCAACGTGGAAGTCT
TCTCAGCCGTTCCAGCCAGCTGGAGGGGGAAGGACGCCGGTCTTCTCTATTATTGTGGCAACCAATGCTTTCGGT
ATGGGAATCGATAATCCAGATGTCCGCTTTGTCGTGCATTGGACACCACCGCGAAGCTTTGAAAGCTTTGTTCAA
GAGTCAGGACGTGCAGGTCGAGACGGCCGAGCCGCCGCCTCACTCGTCTACTACGGAATTCAAGAGAGGAACTTC
ATAGAGAACATGATCTACCGTGATAGTGAATCTCACCGTGCGCAGGCCCCTGAAAATCGAGATGCCAAGCTTGAA
AGCTTCGGCAAGGTCATTCGGTACTGTGAGAGTATTAGGAGGTGTAGACATGAACTGATCAAAGAGTTCTTTGGT
GACTTTGAATTAGAAGAAATGGGATCACAACTGCCGGCCAGGGAGGGTGTGCCTGTTACGAGCTCATCCCCTTGC
GACTTCGCCTGCGATTTTTGCAAAGAGGGTCGTGCCGGGTTGGCAAAGCGCCGGGAAAAAATGGCATCTGAGACT
CAGATGGCTCTCCTATACGCGGATTTCGACTGA
Transcript >Pro_DTO377G3_2|g7169.t1
ATGGATCGTAATCCGGGGCTTACGCGCCAAATTTCTAATATGCGATGGGTCTTGAAACATACCTTCAAAAAGAAT
GATTTCCGTCCACTTCAACGAGAGGTGGTCTCCTCCGTCATCGAAGGACATGATGTCTTCCTTCAAGCATGCACT
TCGTTTGGAAAAAGCATGTGTTATCAGCTGCCTGCAGTGCTCAAAGATTGGGGTTTGACTGTCGTCGTTTGTCCA
CTTCTTTCACTAATGACAGATCAAGTGAATACATTAAAAGCTCTTGATGTACCAGTCGCTACGATCAATTCCAAT
ACTACTCATGAGGAGAGACAACGAGTTTATGAGGACATGCTTTGCGGCCACCCGAGTACACGCCTGCTTTATGTC
ACGCCGGAGTTGTGCCAGACAGACAACTTCCGCCGCCGCCTTCTTATAGTTCACAAGCAAGGTCAGCTCATCCGC
GTTGCCATTGATGAGGCCCATTGCATAAGTGAATGGGGCCATGACTTCCGGCCAGCTTACAAAGAGCTGGGCTGG
TTCAGAAGGAATCTTGTCAATCCGACTGTCCCAATAACTGCATTGACAGCGACAGCAACTCCCCGAGTTCGCTCG
GACATGATCAACATTCTAGGATTGGATCTTGAAACCCTCCGGCTGTTCAATACTCCGTCGGACCGTCCAAACATT
CACTACGAGGTACGATATCTCGCTGACTTCGCTGGTGACAACGATAGCGCAGAAGACAGCCAGATACAAAACCTG
CTCGGATGGCTTAAGGGCATCCAAACCCGACGAGAGGCCCGACTTGGCAGCGAAGCAACACGGCTCCCCCCAATG
TCAGGAATCGTATATGTAGGGACCCGAGCTATGGCTGAACATCTTGCCAACCGGTTATCCTATTCCTCGGACTAT
ATGGTCACGGCAGTGGCATACCACGCCGGCGTGGAAGCCAGAAAGCGCGCGCACATTCAATCAACGTGGAAGTCT
TCTCAGCCGTTCCAGCCAGCTGGAGGGGGAAGGACGCCGGTCTTCTCTATTATTGTGGCAACCAATGCTTTCGGT
ATGGGAATCGATAATCCAGATGTCCGCTTTGTCGTGCATTGGACACCACCGCGAAGCTTTGAAAGCTTTGTTCAA
GAGTCAGGACGTGCAGGTCGAGACGGCCGAGCCGCCGCCTCACTCGTCTACTACGGAATTCAAGAGAGGAACTTC
ATAGAGAACATGATCTACCGTGATAGTGAATCTCACCGTGCGCAGGCCCCTGAAAATCGAGATGCCAAGCTTGAA
AGCTTCGGCAAGGTCATTCGGTACTGTGAGAGTATTAGGAGGTGTAGACATGAACTGATCAAAGAGTTCTTTGGT
GACTTTGAATTAGAAGAAATGGGATCACAACTGCCGGCCAGGGAGGGTGTGCCTGTTACGAGCTCATCCCCTTGC
GACTTCGCCTGCGATTTTTGCAAAGAGGGTCGTGCCGGGTTGGCAAAGCGCCGGGAAAAAATGGCATCTGAGACT
CAGATGGCTCTCCTATACGCGGATTTCGACTGA
Gene >Pro_DTO377G3_2|g7169.t1
ATGGATCGTAATCCGGGGCTTACGCGCCAAATTTCTAATATGCGATGGGTCTTGAAACATACCTTCAAAAAGAAT
GATTTCCGGTAAGTTGATGAACTAGGGCAGAGGGGTCAATTTACTTATTCTACCGCATAGTCCACTTCAACGAGA
GGTGGTCTCCTCCGTCATCGAAGGACATGATGTCTTCCTTCAAGCATGCACTTCGTTTGGAAAAAGCATGTGTTA
TCAGCTGCCTGCAGTGCTCAAAGATTGGGGTTGTGGGTTTTCAGCATATCTTATTTTCAATAACGAATTAGCCTG
ACCTCGATATCTCTAGTGACTGTCGTCGTTTGTCCACTTCTTTCACTAATGGTGAGTGTGGTTTTGGAACGTTTG
CAATCAAACAGCTAATTCCCACAGACAGATCAAGTGAATACATTAAAAGCTCTTGATGTACCAGTCGCTACGATC
AATTCCAATACTACTCATGAGGAGAGACAACGAGTTTATGAGGACATGCTTTGCGGCCACCCGAGTACACGCCTG
CTTTATGTCACGCCGGAGTTGTGCCAGACAGACAACTTCCGCCGCCGCCTTCTTATAGTTCACAAGCAAGGTCAG
CTCATCCGCGTTGCCATTGATGAGGCCCATTGCATAAGTGAATGGGGCCATGACTTCCGGCCAGCTTACAAAGAG
CTGGGCTGGTTCAGAAGGAATCTTGTCAATCCGACTGTCCCAATAACTGCATTGACAGCGACAGCAACTCCCCGA
GTTCGCTCGGACATGATCAACATTCTAGGATTGGATCTTGAAACCCTCCGGCTGTTCAATACTCCGTCGGACCGT
CCAAACATTCACTACGAGGTACGATATCTCGCTGACTTCGCTGGTGACAACGATAGCGCAGAAGACAGCCAGATA
CAAAACCTGCTCGGATGGCTTAAGGGCATCCAAACCCGACGAGAGGCCCGACTTGGCAGCGAAGCAACACGGCTC
CCCCCAATGTCAGGAATCGTATATGTAGGGACCCGAGCTATGGCTGAACATCTTGCCAACCGGTTATCCTATTCC
TCGGACTATATGGTCACGGCAGTGGCATACCACGCCGGCGTGGAAGCCAGAAAGCGCGCGCACATTCAATCAACG
TGGAAGTCTTCTCAGCCGTTCCAGCCAGCTGGAGGGGGAAGGACGCCGGTCTTCTCTATTATTGTGGCAACCAAT
GCTTTCGGTATGGGAATCGATAATCCAGATGTCCGCTTTGTCGTGCATTGGACACCACCGCGAAGCTTTGAAAGC
TTTGTTCAAGAGTCAGGACGTGCAGGTCGAGACGGCCGAGCCGCCGCCTCACTCGTCTACTACGGAATTCAAGAG
AGGAACTTCATAGAGAACATGATCTACCGTGATAGTGAATCTCACCGTGCGCAGGCCCCTGAAAATCGAGATGCC
AAGCTTGAAAGCTTCGGCAAGGTCATTCGGTACTGTGAGAGTATTAGGAGGTGTAGACATGAACTGATCAAAGAG
TTCTTTGGTGACTTTGAATTAGAAGAAATGGGATCACAACTGCCGGCCAGGGAGGGTGTGCCTGTTACGAGCTCA
TCCCCTTGCGACTTCGCCTGCGATTTTTGCAAAGAGGGTCGTGCCGGGTTGGCAAAGCGCCGGGAAAAAATGGCA
TCTGAGACTCAGATGGCTCTCCTATACGCGGATTTCGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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