© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g7149.t1 |
| Gene name | |
| Location | scaffold_21:185615..187367 |
| Strand | - |
| Gene length (bp) | 1752 |
| Transcript length (bp) | 1683 |
| Coding sequence length (bp) | 1683 |
| Protein length (aa) | 561 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 3.8E-40 | 59 | 511 |
| PF00324 | AA_permease | Amino acid permease | 2.7E-18 | 77 | 523 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 59 | 81 | 22 |
| 2 | 101 | 123 | 22 |
| 3 | 136 | 153 | 17 |
| 4 | 188 | 207 | 19 |
| 5 | 214 | 236 | 22 |
| 6 | 262 | 279 | 17 |
| 7 | 300 | 322 | 22 |
| 8 | 351 | 373 | 22 |
| 9 | 403 | 425 | 22 |
| 10 | 429 | 451 | 22 |
| 11 | 463 | 485 | 22 |
| 12 | 500 | 522 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g7149.t1 MTFPDIVALDVPNSPQDVQNSEHQAQNSDGVSVTNEDDRDLLKLGYRSVLARGWGSFDNFACSFSALNCVGGIRV LFYIALSGGGPAAMWSSWVSGSILSVVTAACLAEACSSYPAAGSIYYWAFRSWGGGQVGRFISFLVAAWTLVAWT AFLASDSFGVANYLISEVVVFNPKTSFPYDTADVRARAVAWAISLIFLAMATSLNFLPPRMYSWVFRTGVTIIII DMLLNFIWLPIGVSKTYGFQSAEYVFTSTYNGGDTSPGLNWVLSWYLVASCLVGQDASGHVAEETVSAKKAAAKG IFWATVASALCGFPIIILFLFCMPPIDTFYDTTAPQPFINMYAMALGPHAHVVMTIVAMIGAILNTSISLVAVSR LVFAVARDGVFPFSDVLSRVSKSKQPHNSVIFISVIAALLLCTQLPSQVAFSSLVSTSAAGSLAAYGLVGMGRAF ITRKSFRPGFWDLGWFSIIAAVVTFMWNGFAFAVLCAPAYSDKAIDQDSTLFNYAIVIMGGVTIIAIAEWWRKSN DNWFGHIKVVDTDTETEHSIGREEKTNISADTTGV* |
| Coding | >Pro_DTO377G3_2|g7149.t1 ATGACCTTCCCTGACATTGTTGCCCTCGATGTACCCAACTCCCCGCAAGATGTCCAGAACAGTGAACATCAAGCC CAGAACTCCGATGGAGTTTCCGTGACCAATGAAGATGATCGCGACCTCCTAAAGCTTGGCTATCGCTCTGTCTTG GCTCGAGGCTGGGGCTCGTTCGACAATTTCGCCTGCTCCTTCTCAGCCTTGAATTGCGTTGGAGGAATTCGTGTG CTTTTCTATATCGCCCTCAGTGGAGGCGGGCCGGCTGCCATGTGGAGCTCCTGGGTCTCCGGTAGTATTCTGTCC GTCGTCACGGCCGCCTGTCTCGCTGAAGCTTGTTCAAGCTATCCAGCCGCGGGGTCAATTTACTACTGGGCTTTT CGATCCTGGGGAGGCGGTCAAGTCGGCCGCTTCATCTCCTTCCTCGTTGCCGCATGGACATTGGTTGCGTGGACT GCCTTCCTCGCGAGTGATTCGTTCGGTGTCGCCAATTACCTGATTTCCGAGGTTGTCGTGTTCAATCCGAAGACG AGCTTCCCATACGACACGGCCGATGTCCGAGCGCGTGCCGTGGCATGGGCTATCTCGCTTATTTTCCTGGCCATG GCTACCTCGCTAAATTTCTTGCCCCCGCGCATGTACTCGTGGGTGTTCAGAACGGGTGTGACGATCATTATCATC GATATGCTGCTCAACTTCATCTGGCTTCCCATTGGCGTCTCTAAGACGTACGGCTTCCAGTCAGCCGAATACGTG TTTACGTCTACATACAATGGCGGGGATACCAGTCCTGGGTTGAACTGGGTTTTGTCCTGGTACTTGGTCGCCAGT TGTCTCGTGGGACAGGATGCTTCGGGTCATGTCGCCGAAGAGACCGTGTCCGCTAAGAAAGCCGCCGCGAAGGGT ATCTTCTGGGCAACCGTTGCGTCTGCGCTGTGCGGCTTCCCGATCATCATCTTGTTTCTCTTCTGCATGCCTCCG ATTGACACATTCTATGACACTACCGCACCTCAGCCGTTCATCAACATGTACGCGATGGCGCTCGGTCCCCATGCG CACGTTGTGATGACCATTGTCGCGATGATCGGAGCAATTCTCAATACTTCGATTTCTTTGGTTGCTGTATCGCGA CTTGTATTCGCCGTGGCACGCGATGGTGTCTTCCCATTCAGCGACGTGCTATCGCGTGTGTCGAAGTCAAAGCAG CCTCACAACTCTGTGATCTTCATTTCAGTTATTGCCGCGCTTCTGCTATGCACCCAGCTCCCGTCGCAAGTGGCC TTCTCCAGCTTGGTCTCCACTTCAGCCGCGGGTTCCCTAGCAGCATACGGATTGGTTGGAATGGGCCGAGCGTTT ATCACGCGTAAATCGTTCCGTCCAGGCTTTTGGGATTTGGGTTGGTTTAGCATTATCGCTGCTGTTGTCACATTC ATGTGGAACGGATTTGCTTTCGCTGTTCTCTGCGCCCCGGCTTACTCGGACAAAGCAATTGACCAGGATTCGACC TTGTTCAACTACGCGATTGTGATTATGGGCGGTGTCACTATCATCGCGATCGCCGAGTGGTGGCGCAAGTCCAAT GATAATTGGTTTGGGCATATCAAAGTTGTTGACACAGATACCGAGACAGAGCACTCCATTGGACGTGAGGAGAAG ACGAATATCTCGGCCGATACGACGGGCGTTTGA |
| Transcript | >Pro_DTO377G3_2|g7149.t1 ATGACCTTCCCTGACATTGTTGCCCTCGATGTACCCAACTCCCCGCAAGATGTCCAGAACAGTGAACATCAAGCC CAGAACTCCGATGGAGTTTCCGTGACCAATGAAGATGATCGCGACCTCCTAAAGCTTGGCTATCGCTCTGTCTTG GCTCGAGGCTGGGGCTCGTTCGACAATTTCGCCTGCTCCTTCTCAGCCTTGAATTGCGTTGGAGGAATTCGTGTG CTTTTCTATATCGCCCTCAGTGGAGGCGGGCCGGCTGCCATGTGGAGCTCCTGGGTCTCCGGTAGTATTCTGTCC GTCGTCACGGCCGCCTGTCTCGCTGAAGCTTGTTCAAGCTATCCAGCCGCGGGGTCAATTTACTACTGGGCTTTT CGATCCTGGGGAGGCGGTCAAGTCGGCCGCTTCATCTCCTTCCTCGTTGCCGCATGGACATTGGTTGCGTGGACT GCCTTCCTCGCGAGTGATTCGTTCGGTGTCGCCAATTACCTGATTTCCGAGGTTGTCGTGTTCAATCCGAAGACG AGCTTCCCATACGACACGGCCGATGTCCGAGCGCGTGCCGTGGCATGGGCTATCTCGCTTATTTTCCTGGCCATG GCTACCTCGCTAAATTTCTTGCCCCCGCGCATGTACTCGTGGGTGTTCAGAACGGGTGTGACGATCATTATCATC GATATGCTGCTCAACTTCATCTGGCTTCCCATTGGCGTCTCTAAGACGTACGGCTTCCAGTCAGCCGAATACGTG TTTACGTCTACATACAATGGCGGGGATACCAGTCCTGGGTTGAACTGGGTTTTGTCCTGGTACTTGGTCGCCAGT TGTCTCGTGGGACAGGATGCTTCGGGTCATGTCGCCGAAGAGACCGTGTCCGCTAAGAAAGCCGCCGCGAAGGGT ATCTTCTGGGCAACCGTTGCGTCTGCGCTGTGCGGCTTCCCGATCATCATCTTGTTTCTCTTCTGCATGCCTCCG ATTGACACATTCTATGACACTACCGCACCTCAGCCGTTCATCAACATGTACGCGATGGCGCTCGGTCCCCATGCG CACGTTGTGATGACCATTGTCGCGATGATCGGAGCAATTCTCAATACTTCGATTTCTTTGGTTGCTGTATCGCGA CTTGTATTCGCCGTGGCACGCGATGGTGTCTTCCCATTCAGCGACGTGCTATCGCGTGTGTCGAAGTCAAAGCAG CCTCACAACTCTGTGATCTTCATTTCAGTTATTGCCGCGCTTCTGCTATGCACCCAGCTCCCGTCGCAAGTGGCC TTCTCCAGCTTGGTCTCCACTTCAGCCGCGGGTTCCCTAGCAGCATACGGATTGGTTGGAATGGGCCGAGCGTTT ATCACGCGTAAATCGTTCCGTCCAGGCTTTTGGGATTTGGGTTGGTTTAGCATTATCGCTGCTGTTGTCACATTC ATGTGGAACGGATTTGCTTTCGCTGTTCTCTGCGCCCCGGCTTACTCGGACAAAGCAATTGACCAGGATTCGACC TTGTTCAACTACGCGATTGTGATTATGGGCGGTGTCACTATCATCGCGATCGCCGAGTGGTGGCGCAAGTCCAAT GATAATTGGTTTGGGCATATCAAAGTTGTTGACACAGATACCGAGACAGAGCACTCCATTGGACGTGAGGAGAAG ACGAATATCTCGGCCGATACGACGGGCGTTTGA |
| Gene | >Pro_DTO377G3_2|g7149.t1 ATGACCTTCCCTGACATTGTTGCCCTCGATGTACCCAACTCCCCGCAAGATGTCCAGAACAGTGAACATCAAGCC CAGAACTCCGATGGAGTTTCCGTGACCAATGAAGATGATCGCGACCTCCTAAAGCTTGGCTATCGCTCTGTCTTG GCTCGAGGCTGGGGCTCGTTCGACAATTTCGCCTGCTCCTTCTCAGCCTTGAATTGCGTTGGAGGAATTCGTGTG CTTTTCTATATCGCCCTCAGTGGAGGCGGGCCGGCTGCCATGTATGTTCTACTTTCCGCGCTGTTCCCCGCGCTT TTTCGCATTGATCACATCACTAACAACTTCCTTAGGTGGAGCTCCTGGGTCTCCGGTAGTATTCTGTCCGTCGTC ACGGCCGCCTGTCTCGCTGAAGCTTGTTCAAGCTATCCAGCCGCGGGGTCAATTTACTACTGGGCTTTTCGATCC TGGGGAGGCGGTCAAGTCGGCCGCTTCATCTCCTTCCTCGTTGCCGCATGGACATTGGTTGCGTGGACTGCCTTC CTCGCGAGTGATTCGTTCGGTGTCGCCAATTACCTGATTTCCGAGGTTGTCGTGTTCAATCCGAAGACGAGCTTC CCATACGACACGGCCGATGTCCGAGCGCGTGCCGTGGCATGGGCTATCTCGCTTATTTTCCTGGCCATGGCTACC TCGCTAAATTTCTTGCCCCCGCGCATGTACTCGTGGGTGTTCAGAACGGGTGTGACGATCATTATCATCGATATG CTGCTCAACTTCATCTGGCTTCCCATTGGCGTCTCTAAGACGTACGGCTTCCAGTCAGCCGAATACGTGTTTACG TCTACATACAATGGCGGGGATACCAGTCCTGGGTTGAACTGGGTTTTGTCCTGGTACTTGGTCGCCAGTTGTCTC GTGGGACAGGATGCTTCGGGTCATGTCGCCGAAGAGACCGTGTCCGCTAAGAAAGCCGCCGCGAAGGGTATCTTC TGGGCAACCGTTGCGTCTGCGCTGTGCGGCTTCCCGATCATCATCTTGTTTCTCTTCTGCATGCCTCCGATTGAC ACATTCTATGACACTACCGCACCTCAGCCGTTCATCAACATGTACGCGATGGCGCTCGGTCCCCATGCGCACGTT GTGATGACCATTGTCGCGATGATCGGAGCAATTCTCAATACTTCGATTTCTTTGGTTGCTGTATCGCGACTTGTA TTCGCCGTGGCACGCGATGGTGTCTTCCCATTCAGCGACGTGCTATCGCGTGTGTCGAAGTCAAAGCAGCCTCAC AACTCTGTGATCTTCATTTCAGTTATTGCCGCGCTTCTGCTATGCACCCAGCTCCCGTCGCAAGTGGCCTTCTCC AGCTTGGTCTCCACTTCAGCCGCGGGTTCCCTAGCAGCATACGGATTGGTTGGAATGGGCCGAGCGTTTATCACG CGTAAATCGTTCCGTCCAGGCTTTTGGGATTTGGGTTGGTTTAGCATTATCGCTGCTGTTGTCACATTCATGTGG AACGGATTTGCTTTCGCTGTTCTCTGCGCCCCGGCTTACTCGGACAAAGCAATTGACCAGGATTCGACCTTGTTC AACTACGCGATTGTGATTATGGGCGGTGTCACTATCATCGCGATCGCCGAGTGGTGGCGCAAGTCCAATGATAAT TGGTTTGGGCATATCAAAGTTGTTGACACAGATACCGAGACAGAGCACTCCATTGGACGTGAGGAGAAGACGAAT ATCTCGGCCGATACGACGGGCGTTTGA |