Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7141.t1
Gene name
Locationscaffold_21:168376..169213
Strand-
Gene length (bp)837
Transcript length (bp)690
Coding sequence length (bp)690
Protein length (aa) 230

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01105 EMP24_GP25L emp24/gp25L/p24 family/GOLD 1.7E-51 29 223

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 30 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7141.t1
MVFSGTSSSWLASALALLSFFSLLLPTNALYFYMEGRQTKCFFEDLPKDTLVAGRFETEVLNPQSGIYAVDHNLK
MHITVEETFDNDHRVVSKRDSHSGRFHFSAADPGQHRICFTPETDASSGWLSNSLGAVKITVDLAIGETSKIEPE
DKDKIKDIVQRVKDMNSRLHDIRREQVYQRERESEFRDQSETTNSRVVRWTLIQLAVLSAACAWQLSHLRSFFIK
QKLT*
Coding >Pro_DTO377G3_2|g7141.t1
ATGGTTTTCTCTGGGACATCCTCGTCATGGCTGGCGTCAGCTTTGGCTCTCCTATCCTTCTTTTCTCTTCTTCTG
CCGACTAATGCCCTCTACTTCTACATGGAAGGCCGGCAAACAAAGTGCTTCTTCGAGGACCTGCCTAAGGATACT
CTAGTAGCCGGCCGTTTCGAAACTGAAGTCCTGAACCCCCAGAGCGGCATCTACGCGGTCGACCATAACTTGAAG
ATGCACATCACTGTCGAGGAGACCTTCGACAATGACCACCGCGTCGTATCCAAGCGGGATAGCCATTCTGGTCGC
TTCCACTTCTCCGCCGCGGATCCCGGCCAGCACAGAATCTGCTTCACACCTGAAACGGACGCCTCCTCCGGCTGG
TTGTCCAACTCTTTGGGCGCCGTCAAGATCACCGTCGACCTTGCCATTGGTGAGACCAGCAAGATTGAGCCTGAG
GATAAGGACAAAATCAAGGATATCGTGCAGCGGGTCAAGGATATGAACAGCCGATTGCACGATATCCGTCGTGAG
CAGGTGTACCAGCGGGAACGTGAGTCTGAATTCCGTGACCAGTCTGAGACCACCAACTCGCGTGTCGTGCGCTGG
ACTCTTATCCAGCTCGCCGTTTTGTCCGCCGCATGTGCCTGGCAGCTTTCACACCTGCGGTCATTCTTCATCAAG
CAGAAGTTGACTTAG
Transcript >Pro_DTO377G3_2|g7141.t1
ATGGTTTTCTCTGGGACATCCTCGTCATGGCTGGCGTCAGCTTTGGCTCTCCTATCCTTCTTTTCTCTTCTTCTG
CCGACTAATGCCCTCTACTTCTACATGGAAGGCCGGCAAACAAAGTGCTTCTTCGAGGACCTGCCTAAGGATACT
CTAGTAGCCGGCCGTTTCGAAACTGAAGTCCTGAACCCCCAGAGCGGCATCTACGCGGTCGACCATAACTTGAAG
ATGCACATCACTGTCGAGGAGACCTTCGACAATGACCACCGCGTCGTATCCAAGCGGGATAGCCATTCTGGTCGC
TTCCACTTCTCCGCCGCGGATCCCGGCCAGCACAGAATCTGCTTCACACCTGAAACGGACGCCTCCTCCGGCTGG
TTGTCCAACTCTTTGGGCGCCGTCAAGATCACCGTCGACCTTGCCATTGGTGAGACCAGCAAGATTGAGCCTGAG
GATAAGGACAAAATCAAGGATATCGTGCAGCGGGTCAAGGATATGAACAGCCGATTGCACGATATCCGTCGTGAG
CAGGTGTACCAGCGGGAACGTGAGTCTGAATTCCGTGACCAGTCTGAGACCACCAACTCGCGTGTCGTGCGCTGG
ACTCTTATCCAGCTCGCCGTTTTGTCCGCCGCATGTGCCTGGCAGCTTTCACACCTGCGGTCATTCTTCATCAAG
CAGAAGTTGACTTAG
Gene >Pro_DTO377G3_2|g7141.t1
ATGGTTTTCTCTGGGACATCCTCGTCATGGCTGGCGTCAGCTTTGGCTCTCCTATCCTTCTTTTCTCTTCTTCTG
CCGACTAATGCCCTCTACTTCTACATGGAAGGCCGGCAAACAAAGTGCTTCTTCGAGGACCTGCCTAAGGATACT
CTAGTAGCCGGTATGCGCATCTCTAGAGACTTTACGAAGGAATTTGAAACTAACCTATGTTGTTAAATCACAAAT
AGGCCGTTTCGAAACTGAAGTCCTGAACCCCCAGAGCGGCATCTACGCGGTCGACCATAACTTGAAGATGCACAT
CACTGTCGAGGAGACCTTCGACAATGACCACCGCGTCGTATCCAAGCGGGATAGCCATTCTGGTCGCTTCCACTT
CTCCGCCGCGGATCCCGGCCAGCACAGAATCTGCTTCACACCTGAAACGGACGCCTCCTCCGGCTGGTTGTCCAA
CTCTTTGGGCGCCGTCAAGATCACCGTCGACCTTGCCATTGGTGAGACCAGCAAGATTGAGCCTGAGGATAAGGA
CAAAATCAAGGATATCGTGCAGCGGGTCAAGGATATGAACAGCCGATTGCACGATATCCGTCGTGAGCAGGTGTA
CCAGCGGGTAAGGATTTCCCAATCCAATCTATGGCCAGAGTCTCTCTAGGTGATTAAAGTGGTGATACTAATGTT
TTTTCTACCTAGGAACGTGAGTCTGAATTCCGTGACCAGTCTGAGACCACCAACTCGCGTGTCGTGCGCTGGACT
CTTATCCAGCTCGCCGTTTTGTCCGCCGCATGTGCCTGGCAGCTTTCACACCTGCGGTCATTCTTCATCAAGCAG
AAGTTGACTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail