© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g7128.t1 |
| Gene name | |
| Location | scaffold_21:134184..135248 |
| Strand | - |
| Gene length (bp) | 1064 |
| Transcript length (bp) | 741 |
| Coding sequence length (bp) | 741 |
| Protein length (aa) | 247 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00227 | Proteasome | Proteasome subunit | 9.5E-32 | 66 | 226 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0051603 | proteolysis involved in protein catabolic process | Yes |
| GO:0005839 | proteasome core complex | Yes |
| GO:0008150 | biological_process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0006508 | proteolysis | No |
| GO:0019538 | protein metabolic process | No |
| GO:0032991 | protein-containing complex | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0005575 | cellular_component | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 69 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 40 | 62 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g7128.t1 MAKKSAKRRLTQRVADLTGAPGVKLTARSSSLDHYSPSPSLIICLLVILLLSLIPQTWRFFWAAMRGPTVLKAED DKTRQLNKNTLMAFSGESGDTVQFAEYIQANAALYSMRNDTELSPSAVANFVRGELARSLRSRSPYTVNLLLGGI DPVTEKPHLYWIDYLASLAPLPYAAHGYAQYYCLSILDKHHHPDCSLEEGLALLTLCTDELKRRLPFDYKGMLVK VVTKDGVQEVPVDNDKVVRSA* |
| Coding | >Pro_DTO377G3_2|g7128.t1 ATGGCAAAAAAAAGCGCTAAGCGGCGGCTGACTCAGCGGGTAGCTGACCTCACGGGAGCTCCAGGCGTCAAGCTC ACCGCGCGGTCCTCCTCACTTGACCACTACTCCCCTTCGCCTTCTCTGATCATCTGCTTGCTTGTAATTCTTCTT TTATCTCTCATACCGCAAACATGGAGGTTCTTTTGGGCTGCAATGAGAGGCCCGACAGTTCTGAAGGCTGAGGAT GATAAGACACGACAGTTGAACAAGAACACATTGATGGCTTTCTCTGGCGAGTCTGGAGATACCGTTCAATTTGCC GAATACATCCAAGCCAACGCTGCACTCTACAGCATGCGCAATGATACTGAGCTCAGTCCCTCCGCCGTTGCCAAT TTCGTCCGTGGAGAATTGGCGCGCAGCTTGCGGTCACGGAGTCCCTACACAGTAAACCTGCTGCTAGGTGGTATA GATCCGGTCACTGAGAAGCCTCACCTGTACTGGATTGATTACCTAGCGTCGCTGGCGCCCCTACCATATGCTGCC CACGGCTATGCCCAATACTACTGCCTCTCCATCCTTGACAAACATCACCATCCCGACTGCTCCCTCGAGGAGGGC CTTGCGCTCCTCACCCTGTGCACAGACGAGCTGAAGCGCCGACTACCCTTTGACTACAAGGGGATGCTAGTGAAG GTCGTGACAAAGGATGGCGTGCAAGAAGTCCCCGTGGATAATGATAAGGTGGTCCGGAGTGCTTGA |
| Transcript | >Pro_DTO377G3_2|g7128.t1 ATGGCAAAAAAAAGCGCTAAGCGGCGGCTGACTCAGCGGGTAGCTGACCTCACGGGAGCTCCAGGCGTCAAGCTC ACCGCGCGGTCCTCCTCACTTGACCACTACTCCCCTTCGCCTTCTCTGATCATCTGCTTGCTTGTAATTCTTCTT TTATCTCTCATACCGCAAACATGGAGGTTCTTTTGGGCTGCAATGAGAGGCCCGACAGTTCTGAAGGCTGAGGAT GATAAGACACGACAGTTGAACAAGAACACATTGATGGCTTTCTCTGGCGAGTCTGGAGATACCGTTCAATTTGCC GAATACATCCAAGCCAACGCTGCACTCTACAGCATGCGCAATGATACTGAGCTCAGTCCCTCCGCCGTTGCCAAT TTCGTCCGTGGAGAATTGGCGCGCAGCTTGCGGTCACGGAGTCCCTACACAGTAAACCTGCTGCTAGGTGGTATA GATCCGGTCACTGAGAAGCCTCACCTGTACTGGATTGATTACCTAGCGTCGCTGGCGCCCCTACCATATGCTGCC CACGGCTATGCCCAATACTACTGCCTCTCCATCCTTGACAAACATCACCATCCCGACTGCTCCCTCGAGGAGGGC CTTGCGCTCCTCACCCTGTGCACAGACGAGCTGAAGCGCCGACTACCCTTTGACTACAAGGGGATGCTAGTGAAG GTCGTGACAAAGGATGGCGTGCAAGAAGTCCCCGTGGATAATGATAAGGTGGTCCGGAGTGCTTGA |
| Gene | >Pro_DTO377G3_2|g7128.t1 ATGGCGTTCTCGAAAGACTCGGACTGCGGAGATCAAAACTTCAACTTTTTTTTGGCAGAAAAAAAAGCGCTAAGC GGCGGCTGACTCAGCGGGTAGCTGACCTCACGGGAGCTCCAGGCGTCAAGCTCACCGCGCGGTCCTCCTCACTTG ACCACTACTCCCCTTCGCCTTCTCTGATCATCTGCTTGCTTGTAATTCTTCTTTTATCTCTCATACCGCAAACAT GTAAGTTTATGGTCATCTCGTCGATACAAAACGTCACTAACAGTTTGCTAGGGAGGTTCTTTTGGGTATCGCCGG CAAGGACTTCGTCATTCTTGCTGCATCCAAGGCTGCAATGAGAGGCCCGACAGTTCTGAAGGCTGAGGATGATAA GACACGACAGTTGAACAAGAACACATTGATGGCTTTCTCTGGCGAGTCTGGAGATACCGGTATGTAGCTTCTCCG ATGAGACAAACAAGATGCTAATGATATACCTATGTTAGTTCAATTTGCCGAATACATCCAAGCCAACGCTGCACT CTACAGCATGCGCAATGATACTGAGCTCAGTCCCTCCGCCGTTGCCAATTTCGTCCGTGGAGAATTGGCGCGCAG CTTGCGGTCACGGAGTCCCTACACAGTAAACCTGCTGCTAGGTGGTATAGATCCGGTCACTGAGAAGCCTCACCT GTACTGGATTGATTACCTAGCGTCGCTGGCGCCCCTACCATATGCTGCCCACGGCTATGCCCAGTATGTTTCATG GCCTGCTATGACGGACGAAACTCCAGGCAAGAGATCACTGATGCTGACTTCGCTAGATACTACTGCCTCTCCATC CTTGACAAACATCACCATCCCGACTGCTCCCTCGAGGAGGGCCTTGCGCTCCTCACCCTGTGCACAGACGAGCTG AAGCGCCGACTACCCTTTGACTACAAGGGGGTAAGTTCTTTCAAACGCCATGAGCAAATCCGTTATTCTGACACA ATTATCTACAGATGCTAGTGAAGGTCGTGACAAAGGATGGCGTGCAAGAAGTCCCCGTGGATAATGATAAGGTGG TCCGGAGTGCTTGA |