Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7114.t1
Gene name
Locationscaffold_21:96817..98407
Strand-
Gene length (bp)1590
Transcript length (bp)1524
Coding sequence length (bp)1524
Protein length (aa) 508

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 3.0E-01 152 175
PF00400 WD40 WD domain, G-beta repeat 3.3E-03 234 270
PF00400 WD40 WD domain, G-beta repeat 5.5E-07 398 432
PF08154 NLE NLE (NUC135) domain 1.1E-19 36 100
PF11715 Nup160 Nucleoporin Nup120/160 1.7E-04 300 448

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 30 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7114.t1
MRQPPKKCNTGSNLNDFTMSEDLVTSAAAESAQRQVRVQLISQQEDIALPESTGPILVPTGLRRYALSTLVNNLL
SSEKPIPFEFLINGTFLRTSIDEYLVDNGISAETTLEIEYVRALIPPLHIASFQHDDWVSATDVLSTTSHAASWA
SGATFTKGQERILSGSYDGLLRIWNMSSETIATSPAAADGGHTASIRTAKFVSPNQIASAGLDRTVRLWKYTEGE
GGFTGKISPQLELYGHKAGIESLAVHAKSNRLLTGSADSTVGFWSTKKTDAPAAPENLLPSSNARNTKRRKLNTS
VSTPQRGPLTLLSAHTAPVSAAIFDGRDATVGYSASWDHSLRTWDLVTGSLVDTRTTSHSLLSLEHLPELSLLAA
GTAARHITLIDPRASATTVAAMTLRGHTNAVVSLARDPHSTYGLISGSHDGTCRIWDIRSTKTDKEGVVGESVYS
ITRKSLEEEGKSDSKRVGGEGVKVFSVCWDKTVGIVSAGEDKRIQINRGEGVLPSEA*
Coding >Pro_DTO377G3_2|g7114.t1
ATGCGACAGCCACCAAAAAAGTGCAACACCGGCAGCAATTTGAACGATTTCACAATGAGCGAAGATCTAGTCACT
TCTGCTGCTGCAGAGTCAGCACAGAGACAAGTCCGTGTGCAGCTCATTAGCCAGCAGGAGGATATTGCTCTGCCT
GAAAGCACCGGTCCAATTCTTGTTCCTACAGGGCTTCGACGATATGCGCTATCGACACTGGTGAACAACCTTCTC
TCAAGCGAAAAGCCCATTCCATTTGAGTTTTTGATCAATGGAACTTTTTTGCGGACCTCGATCGATGAATATTTG
GTCGACAACGGTATCTCAGCTGAGACGACCCTCGAGATTGAATATGTTCGAGCTCTGATCCCGCCCCTGCATATC
GCCTCGTTCCAGCATGATGACTGGGTTAGCGCGACAGACGTCCTTTCCACGACCTCACATGCTGCATCCTGGGCC
TCAGGTGCGACTTTTACTAAGGGCCAAGAAAGAATTCTATCAGGAAGCTATGATGGTCTGCTTCGCATCTGGAAT
ATGTCGTCTGAGACTATCGCGACCTCTCCTGCCGCCGCCGATGGTGGCCACACCGCCTCTATCAGAACCGCCAAG
TTCGTTTCTCCAAACCAGATCGCATCCGCAGGTCTTGATCGCACGGTCCGATTGTGGAAGTATACTGAGGGTGAA
GGTGGTTTCACTGGAAAAATTTCTCCTCAGCTGGAGCTGTATGGTCACAAGGCTGGAATCGAGTCACTAGCAGTT
CATGCCAAGTCCAACCGTCTATTGACTGGTTCCGCAGATAGCACCGTTGGATTCTGGTCAACTAAGAAGACCGAT
GCCCCGGCAGCACCTGAGAACTTGCTTCCTTCTAGCAATGCTCGGAACACAAAGCGCCGCAAGCTGAACACCTCC
GTTAGCACACCGCAGCGTGGTCCTCTGACTCTTCTGTCAGCCCACACGGCACCTGTTTCTGCTGCTATTTTCGAT
GGAAGAGATGCTACCGTTGGTTACTCGGCCTCATGGGATCACTCCCTGCGGACATGGGATTTGGTCACTGGTTCT
CTGGTTGACACTCGCACCACATCACACTCGCTCCTCTCGCTCGAGCACCTCCCCGAACTCAGCCTCTTGGCTGCC
GGTACTGCCGCCCGCCATATCACTCTGATTGACCCACGTGCCTCTGCTACTACTGTGGCTGCCATGACTCTCCGA
GGTCACACCAACGCTGTTGTCAGCTTGGCCCGTGACCCTCACAGCACATATGGACTCATTAGCGGTAGCCACGAC
GGCACGTGCAGAATTTGGGATATCCGGTCTACCAAGACCGACAAGGAAGGTGTTGTTGGTGAGAGCGTTTACTCA
ATTACTCGCAAGAGCCTCGAGGAGGAAGGTAAGTCCGATAGCAAGCGGGTTGGCGGTGAAGGTGTCAAGGTGTTC
AGCGTGTGCTGGGACAAGACGGTGGGCATTGTCAGCGCGGGAGAGGATAAGCGGATCCAAATCAACCGCGGCGAA
GGCGTACTGCCTTCGGAGGCATGA
Transcript >Pro_DTO377G3_2|g7114.t1
ATGCGACAGCCACCAAAAAAGTGCAACACCGGCAGCAATTTGAACGATTTCACAATGAGCGAAGATCTAGTCACT
TCTGCTGCTGCAGAGTCAGCACAGAGACAAGTCCGTGTGCAGCTCATTAGCCAGCAGGAGGATATTGCTCTGCCT
GAAAGCACCGGTCCAATTCTTGTTCCTACAGGGCTTCGACGATATGCGCTATCGACACTGGTGAACAACCTTCTC
TCAAGCGAAAAGCCCATTCCATTTGAGTTTTTGATCAATGGAACTTTTTTGCGGACCTCGATCGATGAATATTTG
GTCGACAACGGTATCTCAGCTGAGACGACCCTCGAGATTGAATATGTTCGAGCTCTGATCCCGCCCCTGCATATC
GCCTCGTTCCAGCATGATGACTGGGTTAGCGCGACAGACGTCCTTTCCACGACCTCACATGCTGCATCCTGGGCC
TCAGGTGCGACTTTTACTAAGGGCCAAGAAAGAATTCTATCAGGAAGCTATGATGGTCTGCTTCGCATCTGGAAT
ATGTCGTCTGAGACTATCGCGACCTCTCCTGCCGCCGCCGATGGTGGCCACACCGCCTCTATCAGAACCGCCAAG
TTCGTTTCTCCAAACCAGATCGCATCCGCAGGTCTTGATCGCACGGTCCGATTGTGGAAGTATACTGAGGGTGAA
GGTGGTTTCACTGGAAAAATTTCTCCTCAGCTGGAGCTGTATGGTCACAAGGCTGGAATCGAGTCACTAGCAGTT
CATGCCAAGTCCAACCGTCTATTGACTGGTTCCGCAGATAGCACCGTTGGATTCTGGTCAACTAAGAAGACCGAT
GCCCCGGCAGCACCTGAGAACTTGCTTCCTTCTAGCAATGCTCGGAACACAAAGCGCCGCAAGCTGAACACCTCC
GTTAGCACACCGCAGCGTGGTCCTCTGACTCTTCTGTCAGCCCACACGGCACCTGTTTCTGCTGCTATTTTCGAT
GGAAGAGATGCTACCGTTGGTTACTCGGCCTCATGGGATCACTCCCTGCGGACATGGGATTTGGTCACTGGTTCT
CTGGTTGACACTCGCACCACATCACACTCGCTCCTCTCGCTCGAGCACCTCCCCGAACTCAGCCTCTTGGCTGCC
GGTACTGCCGCCCGCCATATCACTCTGATTGACCCACGTGCCTCTGCTACTACTGTGGCTGCCATGACTCTCCGA
GGTCACACCAACGCTGTTGTCAGCTTGGCCCGTGACCCTCACAGCACATATGGACTCATTAGCGGTAGCCACGAC
GGCACGTGCAGAATTTGGGATATCCGGTCTACCAAGACCGACAAGGAAGGTGTTGTTGGTGAGAGCGTTTACTCA
ATTACTCGCAAGAGCCTCGAGGAGGAAGGTAAGTCCGATAGCAAGCGGGTTGGCGGTGAAGGTGTCAAGGTGTTC
AGCGTGTGCTGGGACAAGACGGTGGGCATTGTCAGCGCGGGAGAGGATAAGCGGATCCAAATCAACCGCGGCGAA
GGCGTACTGCCTTCGGAGGCATGA
Gene >Pro_DTO377G3_2|g7114.t1
ATGCGACAGCCACCAAAAAAGTGCAACACCGGCAGCAATTTGAACGATTTCACAATGAGCGAAGATCTAGTCACT
TCTGCTGCTGCAGAGTCAGCACAGAGACAAGTCCGTGTGCAGCTCATTAGCCAGCAGGAGGATATTGCTCTGCCT
GAAAGCACCGGTCCAATTCTTGTTCCTACAGGTGAGACCCATTGCCGATCAGAAATCATAAATAGTAGTATCAAG
TACTGACTCTTCCTTTAAAAAGGGCTTCGACGATATGCGCTATCGACACTGGTGAACAACCTTCTCTCAAGCGAA
AAGCCCATTCCATTTGAGTTTTTGATCAATGGAACTTTTTTGCGGACCTCGATCGATGAATATTTGGTCGACAAC
GGTATCTCAGCTGAGACGACCCTCGAGATTGAATATGTTCGAGCTCTGATCCCGCCCCTGCATATCGCCTCGTTC
CAGCATGATGACTGGGTTAGCGCGACAGACGTCCTTTCCACGACCTCACATGCTGCATCCTGGGCCTCAGGTGCG
ACTTTTACTAAGGGCCAAGAAAGAATTCTATCAGGAAGCTATGATGGTCTGCTTCGCATCTGGAATATGTCGTCT
GAGACTATCGCGACCTCTCCTGCCGCCGCCGATGGTGGCCACACCGCCTCTATCAGAACCGCCAAGTTCGTTTCT
CCAAACCAGATCGCATCCGCAGGTCTTGATCGCACGGTCCGATTGTGGAAGTATACTGAGGGTGAAGGTGGTTTC
ACTGGAAAAATTTCTCCTCAGCTGGAGCTGTATGGTCACAAGGCTGGAATCGAGTCACTAGCAGTTCATGCCAAG
TCCAACCGTCTATTGACTGGTTCCGCAGATAGCACCGTTGGATTCTGGTCAACTAAGAAGACCGATGCCCCGGCA
GCACCTGAGAACTTGCTTCCTTCTAGCAATGCTCGGAACACAAAGCGCCGCAAGCTGAACACCTCCGTTAGCACA
CCGCAGCGTGGTCCTCTGACTCTTCTGTCAGCCCACACGGCACCTGTTTCTGCTGCTATTTTCGATGGAAGAGAT
GCTACCGTTGGTTACTCGGCCTCATGGGATCACTCCCTGCGGACATGGGATTTGGTCACTGGTTCTCTGGTTGAC
ACTCGCACCACATCACACTCGCTCCTCTCGCTCGAGCACCTCCCCGAACTCAGCCTCTTGGCTGCCGGTACTGCC
GCCCGCCATATCACTCTGATTGACCCACGTGCCTCTGCTACTACTGTGGCTGCCATGACTCTCCGAGGTCACACC
AACGCTGTTGTCAGCTTGGCCCGTGACCCTCACAGCACATATGGACTCATTAGCGGTAGCCACGACGGCACGTGC
AGAATTTGGGATATCCGGTCTACCAAGACCGACAAGGAAGGTGTTGTTGGTGAGAGCGTTTACTCAATTACTCGC
AAGAGCCTCGAGGAGGAAGGTAAGTCCGATAGCAAGCGGGTTGGCGGTGAAGGTGTCAAGGTGTTCAGCGTGTGC
TGGGACAAGACGGTGGGCATTGTCAGCGCGGGAGAGGATAAGCGGATCCAAATCAACCGCGGCGAAGGCGTACTG
CCTTCGGAGGCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail