Protein ID | Pro_DTO377G3_2|g7086.t1 |
Gene name | |
Location | scaffold_21:25082..28148 |
Strand | + |
Gene length (bp) | 3066 |
Transcript length (bp) | 3066 |
Coding sequence length (bp) | 3066 |
Protein length (aa) | 1022 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00924 | MS_channel | Mechanosensitive ion channel | 4.8E-20 | 483 | 636 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016020 | membrane | Yes |
GO:0055085 | transmembrane transport | Yes |
GO:0008150 | biological_process | No |
GO:0006810 | transport | No |
GO:0009987 | cellular process | No |
GO:0051234 | establishment of localization | No |
GO:0110165 | cellular anatomical entity | No |
GO:0005575 | cellular_component | No |
GO:0051179 | localization | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 128 | 150 | 22 |
2 | 155 | 177 | 22 |
3 | 213 | 235 | 22 |
4 | 255 | 277 | 22 |
5 | 484 | 506 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g7086.t1 MGRSSLSIRRLTAHRFEQLHDMPDHSSGNGMLNPNDVTIDIPLTETTSRGQTGARKWNTNTSAQDFHSQTTEKAP IVGVHRGPGGRRRMDTEINEITGKPAESPEDGTINRMGRFYQAVLNYSLVTRYLIYVLPIAILIAIPIIVGATAA TYAKIGGVHIYWFFTWIEIVWFSLWVSKLFARYVPYVFQFLCGIVSSGTRKYALILRALETPIALVLWAVISLVT FLPVMTLTPGKKASGDTAPKSWEKSIKNILFALLVCSLIFLAEKALVQLISISYHRKQFDAKIQVSKRNVYLVNL LFEASRNMFPVYCPEFQDEDSLLFDSILVQACNNGGKRSSAMPLRMLRNVGKNVGRVGDKVTAAFGHVASELTGK QVFNPTATHTMVIEALERKRHAAALARRIWMSFVVEGREALYLEDIVEVLGVEHEAEAEECFLALDRDGNGDISL DEMVMTITEFGRMRKALNHSMYDVDQAIRVLDNLLLCVAGLVGVLVFISFVTTGFGTVIAAGATSLLSLSFVFSV TAQEVLGSCIFLFVKHPFDIGDRVEVSDKPFIVERISLLFTVFRNVTDARITQVPNNILNSLWVDNFTRAKAMHE QLVIPVAFDTTFAEVQLLRTEMEHFVRDKDNCRDFQPDIDIELDGVGDMDKLQLRVDIRHKSNWSNETIRAARRS KFLCALVLAVRKIQVRAPGVAPPAAEDADAADGDDKGDDAGAGADVGHRKSTQPGAADSSKPDPGVAAATATAAG GILDHENTAQSTGYDQDRAGTVTHRGSTQTNATQTNAEREAAIVELLNARSPTVDIGRDHYNGHESALHRTASNA SHQTHLNVPHGSEGINRGLSTGHRKAGDRASFQEQDTHPALRNPQAPLSPVPAGMTPSSSQVPILETPKPGSRGS ARYEPRPHASQDEKSTIQMLGSPDPNRFDGYYSHDTGYNQIPLGGYSAENTPGRDRRDSNPNISSVTASSNYQLS DRYDPASSPSIYSPPQPQPTVPQQAVTYNTAPLRKKEKSPYGEHEA* |
Coding | >Pro_DTO377G3_2|g7086.t1 ATGGGACGTTCGAGTCTTTCCATCAGGCGACTGACGGCTCACCGATTTGAGCAGCTGCACGACATGCCGGACCAT AGCAGCGGCAATGGGATGCTGAATCCTAACGATGTGACCATTGATATCCCTCTGACCGAGACGACTTCTCGTGGT CAAACGGGCGCCCGTAAATGGAACACCAATACCAGTGCCCAGGACTTCCACTCCCAGACCACGGAGAAGGCACCT ATTGTTGGCGTTCACCGTGGTCCTGGTGGTAGGCGTCGCATGGATACAGAAATCAATGAAATAACCGGAAAGCCT GCTGAGTCGCCCGAAGACGGCACTATCAACCGTATGGGCCGTTTCTACCAAGCTGTCCTGAATTACTCCCTCGTC ACTCGTTACCTGATTTATGTCCTTCCAATTGCGATTCTGATCGCCATTCCCATTATTGTGGGCGCTACGGCGGCA ACGTACGCCAAAATTGGCGGTGTTCATATCTACTGGTTCTTCACGTGGATTGAGATCGTCTGGTTCAGTCTGTGG GTGTCCAAGCTCTTCGCCCGTTACGTTCCTTATGTCTTCCAGTTCTTGTGCGGTATCGTCAGCTCCGGTACACGC AAGTATGCGCTTATTCTGCGCGCCCTCGAGACCCCTATTGCGCTTGTGCTGTGGGCTGTTATTTCCCTCGTGACC TTCTTGCCGGTTATGACATTGACTCCCGGTAAGAAGGCTTCCGGCGACACGGCTCCCAAGTCGTGGGAGAAGAGT ATCAAGAATATCTTGTTTGCGCTGCTCGTGTGCAGCCTCATCTTCTTGGCTGAGAAAGCTCTTGTGCAGCTCATC TCGATCAGTTACCACCGTAAGCAGTTCGATGCCAAGATCCAGGTCTCCAAGCGCAATGTGTACTTGGTCAATCTG CTCTTCGAGGCTTCGCGCAATATGTTCCCCGTGTACTGCCCTGAATTCCAAGATGAGGACTCACTCCTTTTCGAT TCCATCCTGGTTCAGGCTTGCAATAATGGTGGCAAGCGGTCCTCCGCTATGCCTCTCCGCATGCTCCGTAATGTC GGCAAGAACGTTGGCCGTGTTGGCGACAAGGTTACCGCTGCTTTTGGGCATGTGGCGTCGGAGCTGACTGGTAAG CAAGTCTTTAACCCGACTGCGACACATACCATGGTTATCGAAGCCCTTGAGCGCAAGCGCCATGCTGCTGCGCTG GCCCGCCGTATCTGGATGTCGTTTGTGGTCGAGGGCCGTGAAGCTTTGTACCTAGAGGACATTGTTGAGGTCCTG GGTGTTGAACACGAGGCTGAGGCCGAGGAGTGCTTTTTGGCTCTTGACAGGGACGGCAACGGTGATATCAGTCTT GACGAGATGGTCATGACCATCACCGAGTTTGGACGCATGAGAAAGGCCCTGAACCACAGTATGTACGACGTCGAC CAGGCTATCCGTGTGCTGGACAACCTGCTTCTGTGTGTCGCTGGTCTGGTTGGTGTTCTTGTCTTCATTTCTTTC GTCACCACTGGATTCGGTACCGTCATTGCGGCTGGTGCCACTTCGCTGCTCTCTCTCAGTTTCGTGTTTTCCGTT ACCGCTCAAGAAGTACTCGGTTCCTGCATCTTCCTTTTCGTTAAGCATCCCTTCGATATCGGTGACCGTGTCGAG GTCAGCGACAAGCCTTTCATCGTTGAGCGTATCTCACTTCTTTTCACTGTCTTCCGCAATGTTACCGATGCCCGC ATCACGCAGGTGCCTAACAATATTCTGAACAGTCTCTGGGTTGACAACTTCACTCGTGCCAAGGCTATGCACGAA CAGCTTGTCATTCCCGTTGCCTTCGACACCACCTTCGCTGAGGTTCAATTGCTGCGCACTGAAATGGAGCACTTC GTTCGCGACAAGGATAACTGCCGTGACTTCCAGCCGGATATTGACATCGAACTTGACGGCGTTGGTGATATGGAC AAGCTCCAGCTGCGGGTTGACATCCGTCACAAGTCTAACTGGTCTAACGAGACTATCCGCGCTGCCCGGCGATCC AAGTTCCTGTGTGCGTTGGTCCTGGCCGTCCGCAAGATCCAGGTTCGCGCTCCAGGTGTTGCACCTCCGGCAGCA GAGGATGCCGACGCTGCAGATGGCGATGACAAGGGTGATGATGCCGGCGCCGGTGCAGACGTAGGTCACCGCAAG TCTACCCAGCCCGGCGCGGCCGATTCCTCTAAGCCCGATCCCGGTGTCGCCGCTGCCACTGCCACTGCCGCCGGA GGTATCCTCGACCACGAGAATACAGCCCAGTCGACAGGCTACGACCAGGATCGAGCAGGAACAGTCACCCATCGC GGCTCCACCCAAACCAACGCCACACAAACCAACGCCGAGCGCGAAGCCGCCATCGTCGAACTGCTCAACGCGCGC TCCCCAACTGTCGACATCGGCCGCGATCACTACAACGGTCACGAGTCAGCCCTCCACCGCACAGCCAGCAACGCC TCCCACCAAACCCATCTAAACGTTCCCCACGGAAGCGAAGGCATCAACCGCGGCCTGTCAACCGGCCACCGCAAG GCCGGCGATCGCGCCTCCTTCCAGGAGCAGGATACACATCCCGCGCTCAGGAACCCCCAAGCCCCTCTCTCCCCA GTGCCCGCCGGCATGACCCCATCCTCAAGCCAAGTCCCCATCCTTGAGACCCCCAAGCCCGGCTCCCGTGGCAGC GCCCGCTACGAGCCGCGTCCCCACGCAAGCCAGGACGAAAAGAGCACCATCCAGATGCTGGGCTCCCCCGACCCC AACCGCTTCGACGGCTACTACTCCCACGACACGGGGTACAATCAAATTCCGCTCGGCGGGTACAGCGCTGAGAAC ACACCGGGACGCGATCGTCGCGACTCCAACCCGAATATCTCCAGCGTGACGGCCTCCAGCAATTATCAACTCTCT GACCGATATGACCCCGCCTCGTCGCCGTCCATCTACTCCCCGCCTCAGCCTCAGCCGACGGTGCCACAGCAGGCT GTGACCTACAATACTGCTCCGCTGAGGAAGAAGGAGAAGTCTCCTTATGGGGAGCATGAGGCTTGA |
Transcript | >Pro_DTO377G3_2|g7086.t1 ATGGGACGTTCGAGTCTTTCCATCAGGCGACTGACGGCTCACCGATTTGAGCAGCTGCACGACATGCCGGACCAT AGCAGCGGCAATGGGATGCTGAATCCTAACGATGTGACCATTGATATCCCTCTGACCGAGACGACTTCTCGTGGT CAAACGGGCGCCCGTAAATGGAACACCAATACCAGTGCCCAGGACTTCCACTCCCAGACCACGGAGAAGGCACCT ATTGTTGGCGTTCACCGTGGTCCTGGTGGTAGGCGTCGCATGGATACAGAAATCAATGAAATAACCGGAAAGCCT GCTGAGTCGCCCGAAGACGGCACTATCAACCGTATGGGCCGTTTCTACCAAGCTGTCCTGAATTACTCCCTCGTC ACTCGTTACCTGATTTATGTCCTTCCAATTGCGATTCTGATCGCCATTCCCATTATTGTGGGCGCTACGGCGGCA ACGTACGCCAAAATTGGCGGTGTTCATATCTACTGGTTCTTCACGTGGATTGAGATCGTCTGGTTCAGTCTGTGG GTGTCCAAGCTCTTCGCCCGTTACGTTCCTTATGTCTTCCAGTTCTTGTGCGGTATCGTCAGCTCCGGTACACGC AAGTATGCGCTTATTCTGCGCGCCCTCGAGACCCCTATTGCGCTTGTGCTGTGGGCTGTTATTTCCCTCGTGACC TTCTTGCCGGTTATGACATTGACTCCCGGTAAGAAGGCTTCCGGCGACACGGCTCCCAAGTCGTGGGAGAAGAGT ATCAAGAATATCTTGTTTGCGCTGCTCGTGTGCAGCCTCATCTTCTTGGCTGAGAAAGCTCTTGTGCAGCTCATC TCGATCAGTTACCACCGTAAGCAGTTCGATGCCAAGATCCAGGTCTCCAAGCGCAATGTGTACTTGGTCAATCTG CTCTTCGAGGCTTCGCGCAATATGTTCCCCGTGTACTGCCCTGAATTCCAAGATGAGGACTCACTCCTTTTCGAT TCCATCCTGGTTCAGGCTTGCAATAATGGTGGCAAGCGGTCCTCCGCTATGCCTCTCCGCATGCTCCGTAATGTC GGCAAGAACGTTGGCCGTGTTGGCGACAAGGTTACCGCTGCTTTTGGGCATGTGGCGTCGGAGCTGACTGGTAAG CAAGTCTTTAACCCGACTGCGACACATACCATGGTTATCGAAGCCCTTGAGCGCAAGCGCCATGCTGCTGCGCTG GCCCGCCGTATCTGGATGTCGTTTGTGGTCGAGGGCCGTGAAGCTTTGTACCTAGAGGACATTGTTGAGGTCCTG GGTGTTGAACACGAGGCTGAGGCCGAGGAGTGCTTTTTGGCTCTTGACAGGGACGGCAACGGTGATATCAGTCTT GACGAGATGGTCATGACCATCACCGAGTTTGGACGCATGAGAAAGGCCCTGAACCACAGTATGTACGACGTCGAC CAGGCTATCCGTGTGCTGGACAACCTGCTTCTGTGTGTCGCTGGTCTGGTTGGTGTTCTTGTCTTCATTTCTTTC GTCACCACTGGATTCGGTACCGTCATTGCGGCTGGTGCCACTTCGCTGCTCTCTCTCAGTTTCGTGTTTTCCGTT ACCGCTCAAGAAGTACTCGGTTCCTGCATCTTCCTTTTCGTTAAGCATCCCTTCGATATCGGTGACCGTGTCGAG GTCAGCGACAAGCCTTTCATCGTTGAGCGTATCTCACTTCTTTTCACTGTCTTCCGCAATGTTACCGATGCCCGC ATCACGCAGGTGCCTAACAATATTCTGAACAGTCTCTGGGTTGACAACTTCACTCGTGCCAAGGCTATGCACGAA CAGCTTGTCATTCCCGTTGCCTTCGACACCACCTTCGCTGAGGTTCAATTGCTGCGCACTGAAATGGAGCACTTC GTTCGCGACAAGGATAACTGCCGTGACTTCCAGCCGGATATTGACATCGAACTTGACGGCGTTGGTGATATGGAC AAGCTCCAGCTGCGGGTTGACATCCGTCACAAGTCTAACTGGTCTAACGAGACTATCCGCGCTGCCCGGCGATCC AAGTTCCTGTGTGCGTTGGTCCTGGCCGTCCGCAAGATCCAGGTTCGCGCTCCAGGTGTTGCACCTCCGGCAGCA GAGGATGCCGACGCTGCAGATGGCGATGACAAGGGTGATGATGCCGGCGCCGGTGCAGACGTAGGTCACCGCAAG TCTACCCAGCCCGGCGCGGCCGATTCCTCTAAGCCCGATCCCGGTGTCGCCGCTGCCACTGCCACTGCCGCCGGA GGTATCCTCGACCACGAGAATACAGCCCAGTCGACAGGCTACGACCAGGATCGAGCAGGAACAGTCACCCATCGC GGCTCCACCCAAACCAACGCCACACAAACCAACGCCGAGCGCGAAGCCGCCATCGTCGAACTGCTCAACGCGCGC TCCCCAACTGTCGACATCGGCCGCGATCACTACAACGGTCACGAGTCAGCCCTCCACCGCACAGCCAGCAACGCC TCCCACCAAACCCATCTAAACGTTCCCCACGGAAGCGAAGGCATCAACCGCGGCCTGTCAACCGGCCACCGCAAG GCCGGCGATCGCGCCTCCTTCCAGGAGCAGGATACACATCCCGCGCTCAGGAACCCCCAAGCCCCTCTCTCCCCA GTGCCCGCCGGCATGACCCCATCCTCAAGCCAAGTCCCCATCCTTGAGACCCCCAAGCCCGGCTCCCGTGGCAGC GCCCGCTACGAGCCGCGTCCCCACGCAAGCCAGGACGAAAAGAGCACCATCCAGATGCTGGGCTCCCCCGACCCC AACCGCTTCGACGGCTACTACTCCCACGACACGGGGTACAATCAAATTCCGCTCGGCGGGTACAGCGCTGAGAAC ACACCGGGACGCGATCGTCGCGACTCCAACCCGAATATCTCCAGCGTGACGGCCTCCAGCAATTATCAACTCTCT GACCGATATGACCCCGCCTCGTCGCCGTCCATCTACTCCCCGCCTCAGCCTCAGCCGACGGTGCCACAGCAGGCT GTGACCTACAATACTGCTCCGCTGAGGAAGAAGGAGAAGTCTCCTTATGGGGAGCATGAGGCTTGA |
Gene | >Pro_DTO377G3_2|g7086.t1 ATGGGACGTTCGAGTCTTTCCATCAGGCGACTGACGGCTCACCGATTTGAGCAGCTGCACGACATGCCGGACCAT AGCAGCGGCAATGGGATGCTGAATCCTAACGATGTGACCATTGATATCCCTCTGACCGAGACGACTTCTCGTGGT CAAACGGGCGCCCGTAAATGGAACACCAATACCAGTGCCCAGGACTTCCACTCCCAGACCACGGAGAAGGCACCT ATTGTTGGCGTTCACCGTGGTCCTGGTGGTAGGCGTCGCATGGATACAGAAATCAATGAAATAACCGGAAAGCCT GCTGAGTCGCCCGAAGACGGCACTATCAACCGTATGGGCCGTTTCTACCAAGCTGTCCTGAATTACTCCCTCGTC ACTCGTTACCTGATTTATGTCCTTCCAATTGCGATTCTGATCGCCATTCCCATTATTGTGGGCGCTACGGCGGCA ACGTACGCCAAAATTGGCGGTGTTCATATCTACTGGTTCTTCACGTGGATTGAGATCGTCTGGTTCAGTCTGTGG GTGTCCAAGCTCTTCGCCCGTTACGTTCCTTATGTCTTCCAGTTCTTGTGCGGTATCGTCAGCTCCGGTACACGC AAGTATGCGCTTATTCTGCGCGCCCTCGAGACCCCTATTGCGCTTGTGCTGTGGGCTGTTATTTCCCTCGTGACC TTCTTGCCGGTTATGACATTGACTCCCGGTAAGAAGGCTTCCGGCGACACGGCTCCCAAGTCGTGGGAGAAGAGT ATCAAGAATATCTTGTTTGCGCTGCTCGTGTGCAGCCTCATCTTCTTGGCTGAGAAAGCTCTTGTGCAGCTCATC TCGATCAGTTACCACCGTAAGCAGTTCGATGCCAAGATCCAGGTCTCCAAGCGCAATGTGTACTTGGTCAATCTG CTCTTCGAGGCTTCGCGCAATATGTTCCCCGTGTACTGCCCTGAATTCCAAGATGAGGACTCACTCCTTTTCGAT TCCATCCTGGTTCAGGCTTGCAATAATGGTGGCAAGCGGTCCTCCGCTATGCCTCTCCGCATGCTCCGTAATGTC GGCAAGAACGTTGGCCGTGTTGGCGACAAGGTTACCGCTGCTTTTGGGCATGTGGCGTCGGAGCTGACTGGTAAG CAAGTCTTTAACCCGACTGCGACACATACCATGGTTATCGAAGCCCTTGAGCGCAAGCGCCATGCTGCTGCGCTG GCCCGCCGTATCTGGATGTCGTTTGTGGTCGAGGGCCGTGAAGCTTTGTACCTAGAGGACATTGTTGAGGTCCTG GGTGTTGAACACGAGGCTGAGGCCGAGGAGTGCTTTTTGGCTCTTGACAGGGACGGCAACGGTGATATCAGTCTT GACGAGATGGTCATGACCATCACCGAGTTTGGACGCATGAGAAAGGCCCTGAACCACAGTATGTACGACGTCGAC CAGGCTATCCGTGTGCTGGACAACCTGCTTCTGTGTGTCGCTGGTCTGGTTGGTGTTCTTGTCTTCATTTCTTTC GTCACCACTGGATTCGGTACCGTCATTGCGGCTGGTGCCACTTCGCTGCTCTCTCTCAGTTTCGTGTTTTCCGTT ACCGCTCAAGAAGTACTCGGTTCCTGCATCTTCCTTTTCGTTAAGCATCCCTTCGATATCGGTGACCGTGTCGAG GTCAGCGACAAGCCTTTCATCGTTGAGCGTATCTCACTTCTTTTCACTGTCTTCCGCAATGTTACCGATGCCCGC ATCACGCAGGTGCCTAACAATATTCTGAACAGTCTCTGGGTTGACAACTTCACTCGTGCCAAGGCTATGCACGAA CAGCTTGTCATTCCCGTTGCCTTCGACACCACCTTCGCTGAGGTTCAATTGCTGCGCACTGAAATGGAGCACTTC GTTCGCGACAAGGATAACTGCCGTGACTTCCAGCCGGATATTGACATCGAACTTGACGGCGTTGGTGATATGGAC AAGCTCCAGCTGCGGGTTGACATCCGTCACAAGTCTAACTGGTCTAACGAGACTATCCGCGCTGCCCGGCGATCC AAGTTCCTGTGTGCGTTGGTCCTGGCCGTCCGCAAGATCCAGGTTCGCGCTCCAGGTGTTGCACCTCCGGCAGCA GAGGATGCCGACGCTGCAGATGGCGATGACAAGGGTGATGATGCCGGCGCCGGTGCAGACGTAGGTCACCGCAAG TCTACCCAGCCCGGCGCGGCCGATTCCTCTAAGCCCGATCCCGGTGTCGCCGCTGCCACTGCCACTGCCGCCGGA GGTATCCTCGACCACGAGAATACAGCCCAGTCGACAGGCTACGACCAGGATCGAGCAGGAACAGTCACCCATCGC GGCTCCACCCAAACCAACGCCACACAAACCAACGCCGAGCGCGAAGCCGCCATCGTCGAACTGCTCAACGCGCGC TCCCCAACTGTCGACATCGGCCGCGATCACTACAACGGTCACGAGTCAGCCCTCCACCGCACAGCCAGCAACGCC TCCCACCAAACCCATCTAAACGTTCCCCACGGAAGCGAAGGCATCAACCGCGGCCTGTCAACCGGCCACCGCAAG GCCGGCGATCGCGCCTCCTTCCAGGAGCAGGATACACATCCCGCGCTCAGGAACCCCCAAGCCCCTCTCTCCCCA GTGCCCGCCGGCATGACCCCATCCTCAAGCCAAGTCCCCATCCTTGAGACCCCCAAGCCCGGCTCCCGTGGCAGC GCCCGCTACGAGCCGCGTCCCCACGCAAGCCAGGACGAAAAGAGCACCATCCAGATGCTGGGCTCCCCCGACCCC AACCGCTTCGACGGCTACTACTCCCACGACACGGGGTACAATCAAATTCCGCTCGGCGGGTACAGCGCTGAGAAC ACACCGGGACGCGATCGTCGCGACTCCAACCCGAATATCTCCAGCGTGACGGCCTCCAGCAATTATCAACTCTCT GACCGATATGACCCCGCCTCGTCGCCGTCCATCTACTCCCCGCCTCAGCCTCAGCCGACGGTGCCACAGCAGGCT GTGACCTACAATACTGCTCCGCTGAGGAAGAAGGAGAAGTCTCCTTATGGGGAGCATGAGGCTTGA |