Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7081.t1
Gene name
Locationscaffold_21:12395..13682
Strand+
Gene length (bp)1287
Transcript length (bp)1137
Coding sequence length (bp)1137
Protein length (aa) 379

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10496 Syntaxin-18_N SNARE-complex protein Syntaxin-18 N-terminus 6.6E-11 17 64

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 70 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7081.t1
MTDLTPTLNKLLSKQSSPLPQTKPCTETADEFLKEAYRINSHIHSLLQYLQSIRHAYLSTTQPHRRNPTPNTNPK
NATPTPSTNLTDPERDAVDTSTALLLRDLATSIANLSSAETLRQETSQTLLHKKYGHSAAGALLWRWAGGSGALD
SASDEGKSAEQVRAEESARSIATIRESVLWFLRRGLECAVGVQRRMVEKRIERVREKEKSVLYKVGAGGVRKGSV
SGSMDRAGAGAGAGAGGRGAGSFDPMSQAPDAAVLSEADTARIEAQLSPEQLQLFAEENDSMLKHYEDTLGKVQN
AEKSLLEISSLQETLVSHLATQEEHISQLVADVDTTHTNVGQGNRELKRATERRSTAQAVFWGTVGLCTWLVVWD
LVF*
Coding >Pro_DTO377G3_2|g7081.t1
ATGACCGACCTAACACCAACTCTCAACAAGCTGCTATCAAAGCAAAGCTCACCACTCCCACAAACCAAACCCTGC
ACAGAAACCGCCGACGAGTTCCTAAAGGAGGCATACCGAATTAACTCCCACATCCACTCTCTCCTCCAATACCTC
CAATCAATCCGCCACGCCTACCTCTCAACAACACAACCACACCGCCGCAACCCAACCCCAAACACCAACCCTAAA
AATGCAACCCCAACCCCCTCAACAAACCTCACAGATCCCGAACGTGACGCAGTCGACACATCAACAGCCCTCCTC
CTCCGCGACCTAGCAACCTCAATCGCAAACCTCTCCTCCGCCGAAACCCTCCGCCAAGAAACCTCACAGACCCTC
CTGCACAAGAAATACGGACACTCGGCCGCCGGCGCACTCCTCTGGCGCTGGGCCGGGGGAAGCGGCGCGCTAGAC
AGCGCCAGCGACGAGGGCAAGTCCGCCGAGCAGGTGCGTGCCGAGGAGAGCGCGCGGTCGATAGCGACGATCCGC
GAGAGCGTGCTTTGGTTCCTGCGGCGCGGGCTGGAGTGCGCTGTCGGTGTGCAGCGGCGGATGGTCGAGAAGAGG
ATTGAGAGGGTGCGGGAGAAGGAGAAGAGCGTGCTTTACAAGGTTGGTGCGGGTGGGGTTAGGAAGGGGTCTGTT
TCTGGTTCTATGGATAGGGCTGGGGCTGGAGCTGGGGCTGGGGCTGGAGGTCGGGGCGCGGGTTCGTTCGATCCT
ATGTCCCAGGCGCCTGATGCGGCGGTTCTGAGTGAGGCCGACACGGCGCGGATCGAGGCGCAGCTTTCGCCGGAG
CAGTTGCAGCTTTTTGCGGAGGAGAATGATTCTATGCTTAAGCATTATGAGGATACGTTGGGGAAGGTTCAAAAC
GCTGAGAAATCTCTCCTGGAGATCTCCTCTTTGCAGGAAACGCTTGTCTCGCATCTTGCTACACAGGAGGAGCAT
ATTTCCCAGCTTGTCGCGGACGTGGATACGACGCATACGAATGTCGGGCAGGGAAATCGGGAGTTGAAGCGTGCT
ACCGAGCGACGGAGTACGGCTCAGGCTGTTTTCTGGGGTACTGTCGGGCTGTGTACCTGGCTTGTGGTCTGGGAT
TTGGTCTTCTAG
Transcript >Pro_DTO377G3_2|g7081.t1
ATGACCGACCTAACACCAACTCTCAACAAGCTGCTATCAAAGCAAAGCTCACCACTCCCACAAACCAAACCCTGC
ACAGAAACCGCCGACGAGTTCCTAAAGGAGGCATACCGAATTAACTCCCACATCCACTCTCTCCTCCAATACCTC
CAATCAATCCGCCACGCCTACCTCTCAACAACACAACCACACCGCCGCAACCCAACCCCAAACACCAACCCTAAA
AATGCAACCCCAACCCCCTCAACAAACCTCACAGATCCCGAACGTGACGCAGTCGACACATCAACAGCCCTCCTC
CTCCGCGACCTAGCAACCTCAATCGCAAACCTCTCCTCCGCCGAAACCCTCCGCCAAGAAACCTCACAGACCCTC
CTGCACAAGAAATACGGACACTCGGCCGCCGGCGCACTCCTCTGGCGCTGGGCCGGGGGAAGCGGCGCGCTAGAC
AGCGCCAGCGACGAGGGCAAGTCCGCCGAGCAGGTGCGTGCCGAGGAGAGCGCGCGGTCGATAGCGACGATCCGC
GAGAGCGTGCTTTGGTTCCTGCGGCGCGGGCTGGAGTGCGCTGTCGGTGTGCAGCGGCGGATGGTCGAGAAGAGG
ATTGAGAGGGTGCGGGAGAAGGAGAAGAGCGTGCTTTACAAGGTTGGTGCGGGTGGGGTTAGGAAGGGGTCTGTT
TCTGGTTCTATGGATAGGGCTGGGGCTGGAGCTGGGGCTGGGGCTGGAGGTCGGGGCGCGGGTTCGTTCGATCCT
ATGTCCCAGGCGCCTGATGCGGCGGTTCTGAGTGAGGCCGACACGGCGCGGATCGAGGCGCAGCTTTCGCCGGAG
CAGTTGCAGCTTTTTGCGGAGGAGAATGATTCTATGCTTAAGCATTATGAGGATACGTTGGGGAAGGTTCAAAAC
GCTGAGAAATCTCTCCTGGAGATCTCCTCTTTGCAGGAAACGCTTGTCTCGCATCTTGCTACACAGGAGGAGCAT
ATTTCCCAGCTTGTCGCGGACGTGGATACGACGCATACGAATGTCGGGCAGGGAAATCGGGAGTTGAAGCGTGCT
ACCGAGCGACGGAGTACGGCTCAGGCTGTTTTCTGGGGTACTGTCGGGCTGTGTACCTGGCTTGTGGTCTGGGAT
TTGGTCTTCTAG
Gene >Pro_DTO377G3_2|g7081.t1
ATGACCGACCTAACACCAACTCTCAACAAGCTGCTATCAAAGCAAAGCTCACCACTCCCACAAACCAAACCCTGC
ACAGAAACCGCCGACGAGTTCCTAAAGGAGGCATACCGAATTGTAAGCCACCCTCACTAACACTATACCAAAAGC
AAACCAGAAAACAAAACCTAACAAAAAGCACCACCCAGAACTCCCACATCCACTCTCTCCTCCAATACCTCCAAT
CAATCCGCCACGCCTACCTCTCAACAACACAACCACACCGCCGCAACCCAACCCCAAACACCAACCCTAAAAATG
CAACCCCAACCCCCTCAACAAACCTCACAGATCCCGAACGTGACGCAGTCGACACATCAACAGCCCTCCTCCTCC
GCGACCTAGCAACCTCAATCGCAAACCTCTCCTCCGCCGAAACCCTCCGCCAAGAAACCTCACAGACCCTCCTGC
ACAAGAAATACGGACACTCGGCCGCCGGCGCACTCCTCTGGCGCTGGGCCGGGGGAAGCGGCGCGCTAGACAGCG
CCAGCGACGAGGGCAAGTCCGCCGAGCAGGTGCGTGCCGAGGAGAGCGCGCGGTCGATAGCGACGATCCGCGAGA
GCGTGCTTTGGTTCCTGCGGCGCGGGCTGGAGTGCGCTGTCGGTGTGCAGCGGCGGATGGTCGAGAAGAGGATTG
AGAGGGTGCGGGAGAAGGAGAAGAGCGTGCTTTACAAGGTTGGTGCGGGTGGGGTTAGGAAGGGGTCTGTTTCTG
GTTCTATGGATAGGGCTGGGGCTGGAGCTGGGGCTGGGGCTGGAGGTCGGGGCGCGGGTTCGTTCGATCCTATGT
CCCAGGCGCCTGATGCGGCGGTTCTGAGTGAGGCCGACACGGCGCGGATCGAGGCGCAGCTTTCGCCGGAGCAGT
TGCAGCTTTTTGCGGAGGAGAATGATTCTATGCTTAAGCATTATGAGGATACGTTGGGGAAGGTTCAGTATGTTT
CTTTTTCCTTTTCCTTTTCTTATATGTTATGCTGGGTTTTTGTTGCATAATGCTAACCATGCCCTCTTTAGAAAC
GCTGAGAAATCTCTCCTGGAGATCTCCTCTTTGCAGGAAACGCTTGTCTCGCATCTTGCTACACAGGAGGAGCAT
ATTTCCCAGCTTGTCGCGGACGTGGATACGACGCATACGAATGTCGGGCAGGGAAATCGGGAGTTGAAGCGTGCT
ACCGAGCGACGGAGTACGGCTCAGGCTGTTTTCTGGGGTACTGTCGGGCTGTGTACCTGGCTTGTGGTCTGGGAT
TTGGTCTTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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