Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7080.t1
Gene name
Locationscaffold_21:11139..12108
Strand-
Gene length (bp)969
Transcript length (bp)969
Coding sequence length (bp)969
Protein length (aa) 323

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02567 PhzC-PhzF Phenazine biosynthesis-like protein 3.3E-10 34 204

GO

GO Term Description Terminal node
GO:0003824 catalytic activity Yes
GO:0009058 biosynthetic process Yes
GO:0008150 biological_process No
GO:0008152 metabolic process No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7080.t1
MEATSSLPHPSVIENVQAHILRVSPAGPDGKGIISVVLNANGLSDEEMQKLTTNYGHPSGFVFSAPADSDLDYEI
RVWHPDHELEKCAHVMIGTVWLLSKLGMMPRGDLRILTKSDCVEAKITKTTDKDNAKENIWVEFFNLACDMNTVN
TENMDVILSDLKISRSDIAPGMVHNAGTVDDADTDIISTTLIPIRSVRRLRDLKLSDDLVKKLLERIQSPGLCLY
AIVDEIRQEYEVRQVPEPDANWEDTTTALAFALLINGFVDRPVEPLQIREPCDNDRYREINLRFRLGGGNASGCW
IGGTAEFETEEKETGQTKTDAE*
Coding >Pro_DTO377G3_2|g7080.t1
ATGGAGGCGACATCATCTCTACCACATCCATCTGTAATAGAGAATGTCCAAGCCCACATTCTACGGGTCTCTCCT
GCAGGTCCAGACGGCAAGGGTATAATTTCAGTTGTCCTAAATGCCAATGGCCTGTCCGACGAAGAAATGCAAAAA
CTTACCACAAATTACGGCCACCCGAGCGGGTTCGTCTTCTCCGCACCAGCAGACTCCGACTTGGACTATGAGATC
CGCGTCTGGCACCCAGACCATGAACTAGAGAAGTGTGCTCATGTAATGATCGGAACCGTGTGGCTACTCTCGAAG
CTTGGGATGATGCCGCGGGGCGACCTCCGCATCTTGACCAAGAGCGACTGTGTGGAAGCAAAGATCACGAAGACC
ACCGACAAAGACAACGCCAAGGAGAACATCTGGGTTGAGTTCTTCAACCTGGCATGTGACATGAACACTGTGAAT
ACCGAAAACATGGATGTCATTCTGTCCGATTTGAAGATTTCGAGATCTGACATTGCACCTGGAATGGTCCACAAT
GCTGGCACGGTCGACGATGCTGACACGGACATAATCTCAACGACACTGATTCCGATCAGATCGGTTAGGAGATTG
CGTGACTTGAAGCTGAGCGATGATCTCGTCAAGAAGCTTCTTGAAAGGATTCAGAGCCCTGGATTGTGTCTGTAT
GCCATCGTCGACGAAATACGGCAGGAGTACGAAGTGAGACAGGTTCCTGAACCTGATGCGAATTGGGAGGACACC
ACGACTGCTTTGGCTTTTGCGCTTTTGATAAATGGCTTTGTCGACAGACCTGTTGAGCCACTTCAGATCAGGGAG
CCTTGCGACAACGACCGTTACCGTGAGATTAATTTGAGGTTCAGGCTTGGGGGTGGCAATGCCAGTGGCTGTTGG
ATTGGAGGTACAGCCGAGTTTGAAACCGAGGAGAAAGAGACTGGACAGACAAAGACCGATGCTGAATAG
Transcript >Pro_DTO377G3_2|g7080.t1
ATGGAGGCGACATCATCTCTACCACATCCATCTGTAATAGAGAATGTCCAAGCCCACATTCTACGGGTCTCTCCT
GCAGGTCCAGACGGCAAGGGTATAATTTCAGTTGTCCTAAATGCCAATGGCCTGTCCGACGAAGAAATGCAAAAA
CTTACCACAAATTACGGCCACCCGAGCGGGTTCGTCTTCTCCGCACCAGCAGACTCCGACTTGGACTATGAGATC
CGCGTCTGGCACCCAGACCATGAACTAGAGAAGTGTGCTCATGTAATGATCGGAACCGTGTGGCTACTCTCGAAG
CTTGGGATGATGCCGCGGGGCGACCTCCGCATCTTGACCAAGAGCGACTGTGTGGAAGCAAAGATCACGAAGACC
ACCGACAAAGACAACGCCAAGGAGAACATCTGGGTTGAGTTCTTCAACCTGGCATGTGACATGAACACTGTGAAT
ACCGAAAACATGGATGTCATTCTGTCCGATTTGAAGATTTCGAGATCTGACATTGCACCTGGAATGGTCCACAAT
GCTGGCACGGTCGACGATGCTGACACGGACATAATCTCAACGACACTGATTCCGATCAGATCGGTTAGGAGATTG
CGTGACTTGAAGCTGAGCGATGATCTCGTCAAGAAGCTTCTTGAAAGGATTCAGAGCCCTGGATTGTGTCTGTAT
GCCATCGTCGACGAAATACGGCAGGAGTACGAAGTGAGACAGGTTCCTGAACCTGATGCGAATTGGGAGGACACC
ACGACTGCTTTGGCTTTTGCGCTTTTGATAAATGGCTTTGTCGACAGACCTGTTGAGCCACTTCAGATCAGGGAG
CCTTGCGACAACGACCGTTACCGTGAGATTAATTTGAGGTTCAGGCTTGGGGGTGGCAATGCCAGTGGCTGTTGG
ATTGGAGGTACAGCCGAGTTTGAAACCGAGGAGAAAGAGACTGGACAGACAAAGACCGATGCTGAATAG
Gene >Pro_DTO377G3_2|g7080.t1
ATGGAGGCGACATCATCTCTACCACATCCATCTGTAATAGAGAATGTCCAAGCCCACATTCTACGGGTCTCTCCT
GCAGGTCCAGACGGCAAGGGTATAATTTCAGTTGTCCTAAATGCCAATGGCCTGTCCGACGAAGAAATGCAAAAA
CTTACCACAAATTACGGCCACCCGAGCGGGTTCGTCTTCTCCGCACCAGCAGACTCCGACTTGGACTATGAGATC
CGCGTCTGGCACCCAGACCATGAACTAGAGAAGTGTGCTCATGTAATGATCGGAACCGTGTGGCTACTCTCGAAG
CTTGGGATGATGCCGCGGGGCGACCTCCGCATCTTGACCAAGAGCGACTGTGTGGAAGCAAAGATCACGAAGACC
ACCGACAAAGACAACGCCAAGGAGAACATCTGGGTTGAGTTCTTCAACCTGGCATGTGACATGAACACTGTGAAT
ACCGAAAACATGGATGTCATTCTGTCCGATTTGAAGATTTCGAGATCTGACATTGCACCTGGAATGGTCCACAAT
GCTGGCACGGTCGACGATGCTGACACGGACATAATCTCAACGACACTGATTCCGATCAGATCGGTTAGGAGATTG
CGTGACTTGAAGCTGAGCGATGATCTCGTCAAGAAGCTTCTTGAAAGGATTCAGAGCCCTGGATTGTGTCTGTAT
GCCATCGTCGACGAAATACGGCAGGAGTACGAAGTGAGACAGGTTCCTGAACCTGATGCGAATTGGGAGGACACC
ACGACTGCTTTGGCTTTTGCGCTTTTGATAAATGGCTTTGTCGACAGACCTGTTGAGCCACTTCAGATCAGGGAG
CCTTGCGACAACGACCGTTACCGTGAGATTAATTTGAGGTTCAGGCTTGGGGGTGGCAATGCCAGTGGCTGTTGG
ATTGGAGGTACAGCCGAGTTTGAAACCGAGGAGAAAGAGACTGGACAGACAAAGACCGATGCTGAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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