Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g7066.t1
Gene name
Location	scaffold_20:378994..380404
Strand	-
Gene length (bp)	1410
Transcript length (bp)	1353
Coding sequence length (bp)	1353
Protein length (aa)	451

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04371	PAD_porph	Porphyromonas-type peptidyl-arginine deiminase	1.9E-96	70	449

GO

GO Term	Description	Terminal node
GO:0009446	putrescine biosynthetic process	Yes
GO:0004668	protein-arginine deiminase activity	Yes
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0003824	catalytic activity	No
GO:0009309	amine biosynthetic process	No
GO:0044271	cellular nitrogen compound biosynthetic process	No
GO:1901566	organonitrogen compound biosynthetic process	No
GO:0006595	polyamine metabolic process	No
GO:0008150	biological_process	No
GO:0016813	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines	No
GO:0071704	organic substance metabolic process	No
GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	No
GO:0008152	metabolic process	No
GO:0044106	cellular amine metabolic process	No
GO:0042401	cellular biogenic amine biosynthetic process	No
GO:0006576	cellular biogenic amine metabolic process	No
GO:0009058	biosynthetic process	No
GO:0003674	molecular_function	No
GO:0006596	polyamine biosynthetic process	No
GO:0009445	putrescine metabolic process	No
GO:0006807	nitrogen compound metabolic process	No
GO:0044249	cellular biosynthetic process	No
GO:0016787	hydrolase activity	No
GO:0044237	cellular metabolic process	No
GO:0009308	amine metabolic process	No
GO:1901564	organonitrogen compound metabolic process	No
GO:0009987	cellular process	No
GO:1901576	organic substance biosynthetic process	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 16	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
3d_25C	Three days - 25 degrees Celsius	32.50	17.92	47.08
5d_25C	Five days - 25 degrees Celsius	24.15	12.48	35.83
7d_25C	Seven days - 25 degrees Celsius	20.96	10.48	31.44
10d_25C	Ten days - 25 degrees Celsius	15.20	7.03	23.38
7d_15C	Seven days - 15 degrees Celsius	23.70	12.21	35.20
7d_30C	Seven days - 30 degrees Celsius	23.86	12.26	35.45

Differential expression

Label1	Label2	Q-value	Significant difference
3d_25C	5d_25C	0.294532	no
3d_25C	7d_25C	0.096746	no
3d_25C	7d_15C	0.251216	no
3d_25C	7d_30C	0.268219	no
3d_25C	10d_25C	0.005235	yes
5d_25C	7d_25C	0.692563	no
5d_25C	7d_15C	0.966695	no
5d_25C	7d_30C	0.978287	no
5d_25C	10d_25C	0.113395	no
7d_25C	7d_15C	0.741167	no
7d_25C	7d_30C	0.722713	no
7d_25C	10d_25C	0.312927	no
7d_15C	7d_30C	0.989720	no
7d_15C	10d_25C	0.130743	no
7d_30C	10d_25C	0.124909	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g7066.t1 MALLHSIQRLRQASTTISLARPHLPVIYQYKPPFQPTHPTATMPPTNKIWHIQHRALSLQADRAKQYIRPAETST HLATLLSFPSRRSTLPELHAKTSNEIISLATTIAAFEPVHLYARSEDIPQAQALLDKQPQHRSNIILIAAPTNHC WIRDTGPVYVHSADPADKTRYAIDFRFCEWGHKTTEYIYGANASPAAAEALETSPQYAEWPVMDAQAMSENTAFA GVVLDLENAGADTVADVVVRVETDIRLEGGGIEVDGEGTFMATESSIIGDARNPGLGKAEIEAELRRLLGVSTFI WFPGRVGLDVTDLHVDAEARFVRPGVVVVCRPHEKAEKVRWEVYSEIRAVLERSTDARGRRFEVHDVVEPDPSFV QGGLAGEEEASAASYVNFYFVNGGLVIPAFGDPEADEKAFELMKSLVPGREVRQVEVNALPRTGGVLHCVTQQVV *
Coding	>Pro_DTO377G3_2\|g7066.t1 ATGGCACTTCTTCACTCGATCCAACGACTAAGACAAGCATCTACCACTATCTCCTTAGCTCGACCTCACCTACCG GTCATATACCAATACAAACCCCCATTCCAACCAACCCACCCAACAGCAACCATGCCGCCCACCAACAAAATCTGG CACATCCAGCACCGCGCCCTCTCACTCCAAGCAGACAGAGCAAAGCAATACATCCGCCCAGCAGAAACAAGCACC CACCTAGCAACCCTCCTAAGCTTCCCCTCCCGCCGCTCGACCCTCCCAGAGCTACACGCCAAAACAAGCAACGAG ATAATCTCCCTCGCGACCACAATCGCAGCCTTCGAACCCGTGCACCTCTACGCCCGATCTGAAGACATCCCACAA GCCCAAGCCCTCCTCGACAAACAACCCCAGCACCGGTCCAACATAATCCTCATCGCAGCGCCAACAAACCACTGC TGGATCCGCGACACAGGCCCCGTCTACGTCCACAGCGCCGACCCAGCAGACAAAACCCGCTACGCAATCGACTTC CGCTTCTGCGAATGGGGCCACAAAACCACAGAATACATCTACGGCGCCAACGCCTCGCCCGCAGCAGCAGAGGCG CTCGAAACATCCCCGCAATACGCCGAGTGGCCGGTAATGGACGCGCAAGCCATGAGCGAGAACACGGCGTTCGCG GGCGTCGTGCTGGATCTCGAGAATGCGGGCGCGGACACGGTGGCGGATGTTGTCGTGCGGGTGGAGACGGATATC CGGCTCGAGGGCGGGGGTATTGAGGTCGACGGCGAGGGGACGTTCATGGCGACGGAGAGTAGTATTATTGGCGAT GCGCGCAATCCTGGACTCGGGAAGGCGGAGATCGAGGCGGAGCTTCGTCGGTTGCTAGGTGTCAGTACGTTCATT TGGTTCCCCGGGAGGGTGGGGCTCGATGTTACGGATTTGCATGTTGATGCTGAGGCGAGGTTTGTGAGACCTGGG GTTGTGGTTGTTTGTCGTCCGCATGAGAAGGCGGAGAAGGTGCGTTGGGAGGTCTATTCGGAGATTCGGGCCGTC TTGGAGAGATCTACTGATGCGCGTGGTCGGCGCTTTGAGGTTCATGATGTTGTTGAGCCGGATCCGAGCTTCGTT CAGGGGGGTCTTGCTGGGGAGGAGGAGGCGTCGGCGGCTTCGTATGTGAACTTTTACTTTGTTAATGGTGGACTG GTTATCCCGGCGTTTGGGGATCCTGAGGCTGATGAGAAGGCCTTTGAGTTGATGAAGAGCCTGGTTCCCGGGAGG GAGGTTCGTCAGGTTGAGGTCAATGCCTTGCCTAGGACTGGAGGTGTGCTGCATTGTGTTACACAGCAGGTGGTG TGA
Transcript	>Pro_DTO377G3_2\|g7066.t1 ATGGCACTTCTTCACTCGATCCAACGACTAAGACAAGCATCTACCACTATCTCCTTAGCTCGACCTCACCTACCG GTCATATACCAATACAAACCCCCATTCCAACCAACCCACCCAACAGCAACCATGCCGCCCACCAACAAAATCTGG CACATCCAGCACCGCGCCCTCTCACTCCAAGCAGACAGAGCAAAGCAATACATCCGCCCAGCAGAAACAAGCACC CACCTAGCAACCCTCCTAAGCTTCCCCTCCCGCCGCTCGACCCTCCCAGAGCTACACGCCAAAACAAGCAACGAG ATAATCTCCCTCGCGACCACAATCGCAGCCTTCGAACCCGTGCACCTCTACGCCCGATCTGAAGACATCCCACAA GCCCAAGCCCTCCTCGACAAACAACCCCAGCACCGGTCCAACATAATCCTCATCGCAGCGCCAACAAACCACTGC TGGATCCGCGACACAGGCCCCGTCTACGTCCACAGCGCCGACCCAGCAGACAAAACCCGCTACGCAATCGACTTC CGCTTCTGCGAATGGGGCCACAAAACCACAGAATACATCTACGGCGCCAACGCCTCGCCCGCAGCAGCAGAGGCG CTCGAAACATCCCCGCAATACGCCGAGTGGCCGGTAATGGACGCGCAAGCCATGAGCGAGAACACGGCGTTCGCG GGCGTCGTGCTGGATCTCGAGAATGCGGGCGCGGACACGGTGGCGGATGTTGTCGTGCGGGTGGAGACGGATATC CGGCTCGAGGGCGGGGGTATTGAGGTCGACGGCGAGGGGACGTTCATGGCGACGGAGAGTAGTATTATTGGCGAT GCGCGCAATCCTGGACTCGGGAAGGCGGAGATCGAGGCGGAGCTTCGTCGGTTGCTAGGTGTCAGTACGTTCATT TGGTTCCCCGGGAGGGTGGGGCTCGATGTTACGGATTTGCATGTTGATGCTGAGGCGAGGTTTGTGAGACCTGGG GTTGTGGTTGTTTGTCGTCCGCATGAGAAGGCGGAGAAGGTGCGTTGGGAGGTCTATTCGGAGATTCGGGCCGTC TTGGAGAGATCTACTGATGCGCGTGGTCGGCGCTTTGAGGTTCATGATGTTGTTGAGCCGGATCCGAGCTTCGTT CAGGGGGGTCTTGCTGGGGAGGAGGAGGCGTCGGCGGCTTCGTATGTGAACTTTTACTTTGTTAATGGTGGACTG GTTATCCCGGCGTTTGGGGATCCTGAGGCTGATGAGAAGGCCTTTGAGTTGATGAAGAGCCTGGTTCCCGGGAGG GAGGTTCGTCAGGTTGAGGTCAATGCCTTGCCTAGGACTGGAGGTGTGCTGCATTGTGTTACACAGCAGGTGGTG TGA
Gene	>Pro_DTO377G3_2\|g7066.t1 ATGGCACTTCTTCACTCGATCCAACGACTAAGACAAGCATCTACCACTGTCAGTACATCAGTCTGTCGCATTCTG TACCACACACATGTGATCTAACCCATCCAGATCTCCTTAGCTCGACCTCACCTACCGGTCATATACCAATACAAA CCCCCATTCCAACCAACCCACCCAACAGCAACCATGCCGCCCACCAACAAAATCTGGCACATCCAGCACCGCGCC CTCTCACTCCAAGCAGACAGAGCAAAGCAATACATCCGCCCAGCAGAAACAAGCACCCACCTAGCAACCCTCCTA AGCTTCCCCTCCCGCCGCTCGACCCTCCCAGAGCTACACGCCAAAACAAGCAACGAGATAATCTCCCTCGCGACC ACAATCGCAGCCTTCGAACCCGTGCACCTCTACGCCCGATCTGAAGACATCCCACAAGCCCAAGCCCTCCTCGAC AAACAACCCCAGCACCGGTCCAACATAATCCTCATCGCAGCGCCAACAAACCACTGCTGGATCCGCGACACAGGC CCCGTCTACGTCCACAGCGCCGACCCAGCAGACAAAACCCGCTACGCAATCGACTTCCGCTTCTGCGAATGGGGC CACAAAACCACAGAATACATCTACGGCGCCAACGCCTCGCCCGCAGCAGCAGAGGCGCTCGAAACATCCCCGCAA TACGCCGAGTGGCCGGTAATGGACGCGCAAGCCATGAGCGAGAACACGGCGTTCGCGGGCGTCGTGCTGGATCTC GAGAATGCGGGCGCGGACACGGTGGCGGATGTTGTCGTGCGGGTGGAGACGGATATCCGGCTCGAGGGCGGGGGT ATTGAGGTCGACGGCGAGGGGACGTTCATGGCGACGGAGAGTAGTATTATTGGCGATGCGCGCAATCCTGGACTC GGGAAGGCGGAGATCGAGGCGGAGCTTCGTCGGTTGCTAGGTGTCAGTACGTTCATTTGGTTCCCCGGGAGGGTG GGGCTCGATGTTACGGATTTGCATGTTGATGCTGAGGCGAGGTTTGTGAGACCTGGGGTTGTGGTTGTTTGTCGT CCGCATGAGAAGGCGGAGAAGGTGCGTTGGGAGGTCTATTCGGAGATTCGGGCCGTCTTGGAGAGATCTACTGAT GCGCGTGGTCGGCGCTTTGAGGTTCATGATGTTGTTGAGCCGGATCCGAGCTTCGTTCAGGGGGGTCTTGCTGGG GAGGAGGAGGCGTCGGCGGCTTCGTATGTGAACTTTTACTTTGTTAATGGTGGACTGGTTATCCCGGCGTTTGGG GATCCTGAGGCTGATGAGAAGGCCTTTGAGTTGATGAAGAGCCTGGTTCCCGGGAGGGAGGTTCGTCAGGTTGAG GTCAATGCCTTGCCTAGGACTGGAGGTGTGCTGCATTGTGTTACACAGCAGGTGGTGTGA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences