Protein ID | Pro_DTO377G3_2|g7058.t1 |
Gene name | |
Location | scaffold_20:354049..356304 |
Strand | + |
Gene length (bp) | 2255 |
Transcript length (bp) | 1941 |
Coding sequence length (bp) | 1941 |
Protein length (aa) | 647 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00069 | Pkinase | Protein kinase domain | 5.1E-70 | 305 | 560 |
PF07714 | PK_Tyr_Ser-Thr | Protein tyrosine and serine/threonine kinase | 6.6E-32 | 305 | 545 |
PF00433 | Pkinase_C | Protein kinase C terminal domain | 2.6E-09 | 584 | 622 |
GO Term | Description | Terminal node |
---|---|---|
GO:0004672 | protein kinase activity | Yes |
GO:0004674 | protein serine/threonine kinase activity | Yes |
GO:0005524 | ATP binding | Yes |
GO:0006468 | protein phosphorylation | Yes |
GO:0017076 | purine nucleotide binding | No |
GO:0008152 | metabolic process | No |
GO:0000166 | nucleotide binding | No |
GO:0043170 | macromolecule metabolic process | No |
GO:0016740 | transferase activity | No |
GO:0030554 | adenyl nucleotide binding | No |
GO:0071704 | organic substance metabolic process | No |
GO:0036211 | protein modification process | No |
GO:0097367 | carbohydrate derivative binding | No |
GO:0005488 | binding | No |
GO:0008150 | biological_process | No |
GO:0019538 | protein metabolic process | No |
GO:0043167 | ion binding | No |
GO:0016772 | transferase activity, transferring phosphorus-containing groups | No |
GO:0032559 | adenyl ribonucleotide binding | No |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:0140096 | catalytic activity, acting on a protein | No |
GO:0003824 | catalytic activity | No |
GO:0032553 | ribonucleotide binding | No |
GO:0044238 | primary metabolic process | No |
GO:0016773 | phosphotransferase activity, alcohol group as acceptor | No |
GO:0009987 | cellular process | No |
GO:1901564 | organonitrogen compound metabolic process | No |
GO:0044237 | cellular metabolic process | No |
GO:0016310 | phosphorylation | No |
GO:0043168 | anion binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:0006793 | phosphorus metabolic process | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0006807 | nitrogen compound metabolic process | No |
GO:0003674 | molecular_function | No |
GO:0043412 | macromolecule modification | No |
GO:0036094 | small molecule binding | No |
GO:0016301 | kinase activity | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0006796 | phosphate-containing compound metabolic process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 20 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
3d_25C | Three days - 25 degrees Celsius | 56.34 | 34.47 | 78.20 |
5d_25C | Five days - 25 degrees Celsius | 62.82 | 38.52 | 87.11 |
7d_25C | Seven days - 25 degrees Celsius | 69.59 | 42.76 | 96.43 |
10d_25C | Ten days - 25 degrees Celsius | 101.11 | 61.70 | 140.52 |
7d_15C | Seven days - 15 degrees Celsius | 57.05 | 34.71 | 79.40 |
7d_30C | Seven days - 30 degrees Celsius | 86.32 | 53.00 | 119.64 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
3d_25C | 5d_25C | 0.692563 | no |
3d_25C | 7d_25C | 0.376299 | no |
3d_25C | 7d_15C | 0.972367 | no |
3d_25C | 7d_30C | 0.036293 | yes |
3d_25C | 10d_25C | 0.003197 | yes |
5d_25C | 7d_25C | 0.717641 | no |
5d_25C | 7d_15C | 0.740372 | no |
5d_25C | 7d_30C | 0.136827 | no |
5d_25C | 10d_25C | 0.020140 | yes |
7d_25C | 7d_15C | 0.415803 | no |
7d_25C | 7d_30C | 0.351780 | no |
7d_25C | 10d_25C | 0.071362 | no |
7d_15C | 7d_30C | 0.046354 | yes |
7d_15C | 10d_25C | 0.004045 | yes |
7d_30C | 10d_25C | 0.536545 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g7058.t1 MSWKLTKSMFTGKLKETHLAPLTSSFGRSSSTSTIKGDSNGDEALTPVASNPPSATPSTNGIAASESLVSPPVAP VNPGILIVTLHEGRNFSLSPHFQQIFNSHFQNNSYASSSLRPSTSSSSHSSQNQAGSFVPSGRPQSTSGGINAAP TIHGRYSTKYLPYALLDFEKNQVFVDAVSGTPESPLWAGDNTAFKFDVSRKTELNVQLYLRNPAARPGAGRSEDI FLGACKVNPRFEESQPYVEDPKLSKKDNQKAAAAHDEQGRQQGHQGTEWLDLQFGVGSIKIGISFVENKQRSLKL EDFDLLKVVGKGSFGKVMQVMKKDTGRIYALKTIRKAHIISRSEVTHTLAERSVLAQINNPFIVPLKFSFQSPEK LYFVLAFVNGGELFHHLQREQRFDINRARFYTAELLCALECLHGFKVIYRDLKPENILLDYTGHIALCDFGLCKL DMKDEDRTNTFCGTPEYLAPELLLGNGYTKTVDWWTLGVLLYEMLTGLPPFYDENTNEMYRKILQEPLTFPSSDI VPPAARDLLSRLLDRDPVRRLGANGAAEIKSHHFFANIDWRKLLQRKYEPSFRPNVVDARDTENFDVEFTREAPQ DSYVDGPVLSQTMQQQFAGWSYNRPVAGLGDAGGSVKDPSFGSIAE* |
Coding | >Pro_DTO377G3_2|g7058.t1 ATGTCCTGGAAGCTCACTAAAAGTATGTTTACTGGCAAGTTGAAGGAGACGCATCTGGCGCCCTTGACCTCATCA TTTGGCCGGTCGTCGTCTACTTCGACGATCAAGGGTGACTCAAATGGTGATGAGGCTCTGACACCTGTCGCCTCT AACCCGCCCTCCGCCACCCCATCAACGAACGGGATCGCGGCTTCCGAGTCTCTTGTATCTCCTCCTGTGGCCCCT GTGAACCCAGGAATCCTTATCGTCACTCTCCACGAAGGGCGCAATTTTTCGTTGTCACCTCACTTCCAACAGATC TTCAACTCGCATTTCCAAAATAACTCTTACGCGTCCTCTTCTCTGCGCCCAAGTACCTCTTCTTCGTCACATTCA TCTCAGAACCAAGCGGGTTCCTTTGTGCCATCTGGCCGACCCCAGTCCACAAGTGGGGGAATCAATGCCGCCCCC ACTATCCACGGTCGCTATTCCACCAAATACCTTCCGTATGCCCTCCTTGATTTCGAGAAGAATCAGGTCTTTGTG GATGCCGTTTCGGGAACTCCAGAGAGCCCATTGTGGGCTGGTGATAATACAGCCTTCAAGTTCGATGTGTCCCGG AAGACCGAGTTGAATGTACAGCTGTATCTGCGCAACCCTGCTGCCCGGCCTGGTGCCGGACGGAGTGAGGATATC TTCTTGGGCGCATGCAAGGTCAACCCTCGCTTTGAAGAGAGCCAGCCATATGTGGAGGATCCGAAGCTCAGCAAG AAGGATAACCAGAAGGCCGCCGCAGCTCATGATGAGCAAGGGCGTCAACAGGGTCATCAAGGTACTGAGTGGCTG GATCTCCAATTTGGCGTTGGCTCGATCAAGATTGGTATTTCCTTTGTGGAGAACAAGCAGCGGAGTCTTAAATTA GAAGACTTTGATTTGCTCAAGGTTGTGGGCAAGGGTAGTTTCGGAAAGGTCATGCAGGTCATGAAGAAGGATACT GGTCGGATCTACGCCCTCAAGACAATTCGCAAGGCTCACATTATCTCGCGATCGGAAGTCACACACACACTCGCC GAGCGATCGGTTCTTGCACAAATTAACAACCCGTTTATTGTTCCGCTGAAGTTTTCATTCCAGTCGCCTGAGAAG CTGTACTTCGTGTTAGCATTTGTGAACGGCGGAGAGTTGTTCCACCATTTGCAAAGGGAGCAACGATTTGATATC AACCGAGCCCGTTTCTACACCGCAGAGTTGCTGTGCGCTCTCGAGTGTCTCCACGGCTTCAAAGTCATCTACCGA GATCTCAAGCCTGAGAACATTCTTCTCGATTACACCGGGCATATCGCTCTTTGCGATTTCGGTCTCTGCAAGCTA GACATGAAAGATGAAGACCGAACCAATACGTTCTGTGGAACCCCTGAATATCTGGCTCCAGAACTTCTCCTTGGC AACGGCTACACCAAGACTGTGGATTGGTGGACTCTCGGTGTTTTGCTCTACGAGATGTTGACAGGCCTGCCTCCA TTCTATGATGAAAACACCAACGAAATGTATCGTAAGATCTTGCAAGAGCCTTTGACCTTCCCCAGCAGCGACATC GTCCCGCCTGCTGCGCGGGATCTTCTCAGTCGACTGTTGGACCGTGACCCTGTGCGCCGACTGGGTGCCAACGGT GCTGCGGAGATCAAGTCTCACCACTTCTTTGCCAACATCGACTGGCGTAAGCTTCTGCAGAGGAAGTATGAACCC AGCTTCCGACCAAACGTGGTGGATGCCCGTGATACTGAGAACTTTGATGTTGAATTCACCAGGGAGGCGCCCCAG GACTCATATGTCGATGGCCCCGTCCTGTCGCAAACCATGCAGCAACAGTTTGCCGGATGGTCATACAACCGACCC GTGGCTGGCCTCGGCGATGCAGGCGGCAGTGTTAAAGACCCGTCCTTCGGTAGCATTGCGGAGTAG |
Transcript | >Pro_DTO377G3_2|g7058.t1 ATGTCCTGGAAGCTCACTAAAAGTATGTTTACTGGCAAGTTGAAGGAGACGCATCTGGCGCCCTTGACCTCATCA TTTGGCCGGTCGTCGTCTACTTCGACGATCAAGGGTGACTCAAATGGTGATGAGGCTCTGACACCTGTCGCCTCT AACCCGCCCTCCGCCACCCCATCAACGAACGGGATCGCGGCTTCCGAGTCTCTTGTATCTCCTCCTGTGGCCCCT GTGAACCCAGGAATCCTTATCGTCACTCTCCACGAAGGGCGCAATTTTTCGTTGTCACCTCACTTCCAACAGATC TTCAACTCGCATTTCCAAAATAACTCTTACGCGTCCTCTTCTCTGCGCCCAAGTACCTCTTCTTCGTCACATTCA TCTCAGAACCAAGCGGGTTCCTTTGTGCCATCTGGCCGACCCCAGTCCACAAGTGGGGGAATCAATGCCGCCCCC ACTATCCACGGTCGCTATTCCACCAAATACCTTCCGTATGCCCTCCTTGATTTCGAGAAGAATCAGGTCTTTGTG GATGCCGTTTCGGGAACTCCAGAGAGCCCATTGTGGGCTGGTGATAATACAGCCTTCAAGTTCGATGTGTCCCGG AAGACCGAGTTGAATGTACAGCTGTATCTGCGCAACCCTGCTGCCCGGCCTGGTGCCGGACGGAGTGAGGATATC TTCTTGGGCGCATGCAAGGTCAACCCTCGCTTTGAAGAGAGCCAGCCATATGTGGAGGATCCGAAGCTCAGCAAG AAGGATAACCAGAAGGCCGCCGCAGCTCATGATGAGCAAGGGCGTCAACAGGGTCATCAAGGTACTGAGTGGCTG GATCTCCAATTTGGCGTTGGCTCGATCAAGATTGGTATTTCCTTTGTGGAGAACAAGCAGCGGAGTCTTAAATTA GAAGACTTTGATTTGCTCAAGGTTGTGGGCAAGGGTAGTTTCGGAAAGGTCATGCAGGTCATGAAGAAGGATACT GGTCGGATCTACGCCCTCAAGACAATTCGCAAGGCTCACATTATCTCGCGATCGGAAGTCACACACACACTCGCC GAGCGATCGGTTCTTGCACAAATTAACAACCCGTTTATTGTTCCGCTGAAGTTTTCATTCCAGTCGCCTGAGAAG CTGTACTTCGTGTTAGCATTTGTGAACGGCGGAGAGTTGTTCCACCATTTGCAAAGGGAGCAACGATTTGATATC AACCGAGCCCGTTTCTACACCGCAGAGTTGCTGTGCGCTCTCGAGTGTCTCCACGGCTTCAAAGTCATCTACCGA GATCTCAAGCCTGAGAACATTCTTCTCGATTACACCGGGCATATCGCTCTTTGCGATTTCGGTCTCTGCAAGCTA GACATGAAAGATGAAGACCGAACCAATACGTTCTGTGGAACCCCTGAATATCTGGCTCCAGAACTTCTCCTTGGC AACGGCTACACCAAGACTGTGGATTGGTGGACTCTCGGTGTTTTGCTCTACGAGATGTTGACAGGCCTGCCTCCA TTCTATGATGAAAACACCAACGAAATGTATCGTAAGATCTTGCAAGAGCCTTTGACCTTCCCCAGCAGCGACATC GTCCCGCCTGCTGCGCGGGATCTTCTCAGTCGACTGTTGGACCGTGACCCTGTGCGCCGACTGGGTGCCAACGGT GCTGCGGAGATCAAGTCTCACCACTTCTTTGCCAACATCGACTGGCGTAAGCTTCTGCAGAGGAAGTATGAACCC AGCTTCCGACCAAACGTGGTGGATGCCCGTGATACTGAGAACTTTGATGTTGAATTCACCAGGGAGGCGCCCCAG GACTCATATGTCGATGGCCCCGTCCTGTCGCAAACCATGCAGCAACAGTTTGCCGGATGGTCATACAACCGACCC GTGGCTGGCCTCGGCGATGCAGGCGGCAGTGTTAAAGACCCGTCCTTCGGTAGCATTGCGGAGTAG |
Gene | >Pro_DTO377G3_2|g7058.t1 ATGTCCTGGAAGCTCACTAAAAGTATGTTTACTGGCAGTTGGTCTCCCTCTCTCCCCCCTCAATACCCCTCTCTG CACTGCAGTGGACCAGAGGCAGTCGCTAATGATCCAACTCGTCTGAAGAGTTGAAGGAGACGCATCTGGCGCCCT TGACCTCATCATTTGGCCGGTCGTCGTCTACTTCGACGATCAAGGGTGACTCAAATGGTGATGAGGCTCTGACAC CTGTCGCCTCTAACCCGCCCTCCGCCACCCCATCAACGAACGGGATCGGTATGTTGTTCTTATTACTAGAATTCC CCCCCAGTAACTAATCAGTCCATCGTTCTGATAGCGGCTTCCGAGTCTCTTGTATCTCCTCCTGTGGCCCCTGTG AACCCAGGAATCCTTATCGTCACTCTCCACGAAGGGCGCAATTTTTCGTTGTCACCTCACTTCCAACAGATCTTC AACTCGCATTTCCAAAATAACTCTTACGCGTCCTCTTCTCTGCGCCCAAGTACCTCTTCTTCGTCACATTCATCT CAGAACCAAGCGGGTTCCTTTGTGCCATCTGGCCGACCCCAGTCCACAAGTGGGGGAATCAATGCCGCCCCCACT ATCCACGGTCGCTATTCCACCAAATACCTTCCGTATGCCCTCCTTGATTTCGAGAAGAATCAGGTCTTTGTGGAT GCCGTTTCGGGAACTCCAGAGAGCCCATTGTGGGCTGGTGATAATACAGCCTTCAAGTTCGATGTGTCCCGGAAG ACCGAGTTGAATGTACAGCTGTATCTGCGCAACCCTGCTGCCCGGCCTGGTGCCGGACGGAGTGAGGATATCTTC TTGGGCGCATGCAAGGTCAACCCTCGCTTTGAAGAGAGCCAGCCATATGTGGAGGATCCGAAGCTCAGCAAGAAG GATAACCAGAAGGCCGCCGCAGCTCATGATGAGCAAGGGCGTCAACAGGGTCATCAAGGTACTGAGTGGCTGGAT CTCCAATTTGGCGTTGGCTCGATCAAGATTGGTATTTCCTTTGTGGAGAACAAGCAGCGGAGTCTTAAATTAGAA GACTTTGATTTGCTCAAGGTTGTGGGCAAGGGTAGTTTCGGAAAGGTCATGCAGGTCATGTAGGTTGACTCGATA TCTACTTATATGGGTCCAAACTTCTAACAGTCGGGGATTAACAGGAAGAAGGATACTGGTCGGATCTACGCCCTC AAGACAATTCGCAAGGCTCACATTATCTCGCGATCGGAAGTCACACACACACTCGCCGAGCGATCGGTTCTTGCA CAAATTAACAACCCGTTTATTGTTCCGCTGAAGTTTTCATTCCAGTCGCCTGAGAAGCTGTACTTCGTGTTAGCA TTTGTGAACGGCGGAGAGTTGTTCCACCATTTGCAAAGGGAGCAACGATTTGATATCAACCGAGCCCGTTTCTAC ACCGCAGAGTTGCTGTGCGCTCTCGAGTGTCTCCACGGCTTCAAAGTCATCTACCGAGATCTCAAGCCTGAGAAC ATTCTTCTCGATTACACCGGGCATATCGCTCTTTGCGATTTCGGTCTCTGCAAGCTAGACATGAAAGATGAAGAC CGAACCAATAGTAAGATCTCACCACTCATGATACGCCCTACATATCTAACCAAACTTAGCGTTCTGTGGAACCCC TGAATATCTGGCTCCAGAACTTCTCCTTGGCAACGGCTACACCAAGACTGTGGATTGGTGGACTCTCGGTGTTTT GCTCTACGAGATGTTGACAGGCCTGCCTCCATTCTATGATGAAAACACCAACGAAATGTATCGTAAGATCTTGCA AGAGCCTTTGACCTTCCCCAGCAGCGACATCGTCCCGCCTGCTGCGCGGGATCTTCTCAGTCGACTGTTGGACCG TGACCCTGTGCGCCGACTGGGTGCCAACGGTGCTGCGGAGATCAAGTCTCACCACTTCTTTGCCAACATCGACTG GCGTAAGCTTCTGCAGAGGAAGTATGAACCCAGCTTCCGACCAAACGTGGTATGTATTCTTCACTCCTGATCATG CAATGGACCAACATGTGGCTAACTTAATGCAGGTGGATGCCCGTGATACTGAGAACTTTGATGTTGAATTCACCA GGGAGGCGCCCCAGGACTCATATGTCGATGGCCCCGTCCTGTCGCAAACCATGCAGCAACAGTTTGCCGGATGGT CATACAACCGACCCGTGGCTGGCCTCGGCGATGCAGGCGGCAGTGTTAAAGACCCGTCCTTCGGTAGCATTGCGG AGTAG |