Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7055.t1
Gene namempdA
Locationscaffold_20:348841..350008
Strand+
Gene length (bp)1167
Transcript length (bp)1167
Coding sequence length (bp)1167
Protein length (aa) 389

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08125 Mannitol_dh_C Mannitol dehydrogenase C-terminal domain 8.0E-43 153 372
PF01232 Mannitol_dh Mannitol dehydrogenase Rossmann domain 1.9E-17 4 124

GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0003674 molecular_function No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 33 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7055.t1
MEKKAVHFGGGNIGRGFVAEFLHTAGFEVVFVDVMDGIITALQNTKSYEVTEVSDEGESTKTITNYRAINSKTHE
SDVIKEISTASVVTCAVGPNILKFIAPVIAKGIDARTATTPLAVIACENAIGATDTLHQFIKDNTARDRVGSMPD
RARFANSAIDRIVPGQPAHSGLNVRIEKFYEWAVESTPFGEFGHPDIPAIHWVGHLEPYIERKLFTVNTGHATAA
YYGYNAGKKTIAEALKDPRIRGIVRNVLQETASLIIDKHEISAAEQQEYVETIITRISNHYLEDTVERVGRAPMR
KLSRKERFIGPAAQLAERGGKFDALMGSLEMAMRFQNVEGDEESVELAKVLKENSPADAAAQLTGLERDHPLFPH
VVKVVDRVQSDAK*
Coding >Pro_DTO377G3_2|g7055.t1
ATGGAGAAGAAGGCTGTTCACTTCGGTGGTGGTAACATCGGCCGTGGCTTCGTGGCCGAGTTCCTCCACACGGCT
GGCTTTGAGGTCGTCTTCGTCGATGTCATGGACGGCATCATCACTGCTCTACAAAACACCAAGTCCTACGAGGTC
ACTGAGGTCAGTGATGAGGGCGAGTCTACCAAGACCATCACCAACTACCGTGCAATCAACTCCAAGACCCATGAG
AGCGATGTCATCAAGGAGATCTCAACCGCCAGTGTTGTAACCTGTGCCGTGGGTCCGAACATCCTCAAGTTTATC
GCTCCCGTCATTGCCAAGGGTATCGACGCCCGCACCGCCACCACACCGTTGGCCGTCATTGCCTGTGAGAACGCT
ATCGGTGCCACTGACACTCTACACCAGTTCATCAAAGACAACACCGCCCGAGACCGTGTTGGCTCTATGCCAGAC
CGAGCCCGGTTTGCTAACTCGGCCATTGACCGTATTGTACCTGGCCAGCCCGCCCACAGCGGTCTCAATGTACGC
ATCGAGAAGTTCTATGAATGGGCCGTGGAGTCCACTCCTTTCGGCGAGTTTGGTCACCCAGACATCCCAGCTATT
CACTGGGTCGGTCACCTGGAGCCCTACATTGAGCGCAAGTTGTTCACCGTCAACACCGGCCACGCCACTGCGGCC
TACTATGGCTACAATGCCGGCAAGAAGACCATTGCCGAAGCCCTCAAGGACCCTCGCATCCGCGGCATTGTCCGT
AACGTGCTTCAAGAGACTGCCTCCCTCATCATCGACAAACATGAGATCAGCGCCGCCGAGCAGCAGGAGTACGTC
GAGACCATCATCACCCGAATTTCCAACCACTACCTTGAGGACACGGTCGAGCGAGTGGGCCGTGCCCCAATGCGC
AAACTGTCCCGCAAGGAGCGTTTCATCGGCCCGGCTGCCCAGCTGGCTGAGCGTGGCGGAAAGTTTGACGCACTG
ATGGGCTCTCTTGAGATGGCTATGCGGTTCCAGAATGTGGAAGGTGACGAGGAGAGTGTGGAATTGGCCAAGGTC
CTCAAGGAGAACTCGCCTGCCGACGCTGCTGCCCAATTGACCGGCTTGGAACGAGACCACCCTCTCTTCCCCCAC
GTGGTCAAGGTCGTGGACCGCGTACAATCTGACGCAAAGTAG
Transcript >Pro_DTO377G3_2|g7055.t1
ATGGAGAAGAAGGCTGTTCACTTCGGTGGTGGTAACATCGGCCGTGGCTTCGTGGCCGAGTTCCTCCACACGGCT
GGCTTTGAGGTCGTCTTCGTCGATGTCATGGACGGCATCATCACTGCTCTACAAAACACCAAGTCCTACGAGGTC
ACTGAGGTCAGTGATGAGGGCGAGTCTACCAAGACCATCACCAACTACCGTGCAATCAACTCCAAGACCCATGAG
AGCGATGTCATCAAGGAGATCTCAACCGCCAGTGTTGTAACCTGTGCCGTGGGTCCGAACATCCTCAAGTTTATC
GCTCCCGTCATTGCCAAGGGTATCGACGCCCGCACCGCCACCACACCGTTGGCCGTCATTGCCTGTGAGAACGCT
ATCGGTGCCACTGACACTCTACACCAGTTCATCAAAGACAACACCGCCCGAGACCGTGTTGGCTCTATGCCAGAC
CGAGCCCGGTTTGCTAACTCGGCCATTGACCGTATTGTACCTGGCCAGCCCGCCCACAGCGGTCTCAATGTACGC
ATCGAGAAGTTCTATGAATGGGCCGTGGAGTCCACTCCTTTCGGCGAGTTTGGTCACCCAGACATCCCAGCTATT
CACTGGGTCGGTCACCTGGAGCCCTACATTGAGCGCAAGTTGTTCACCGTCAACACCGGCCACGCCACTGCGGCC
TACTATGGCTACAATGCCGGCAAGAAGACCATTGCCGAAGCCCTCAAGGACCCTCGCATCCGCGGCATTGTCCGT
AACGTGCTTCAAGAGACTGCCTCCCTCATCATCGACAAACATGAGATCAGCGCCGCCGAGCAGCAGGAGTACGTC
GAGACCATCATCACCCGAATTTCCAACCACTACCTTGAGGACACGGTCGAGCGAGTGGGCCGTGCCCCAATGCGC
AAACTGTCCCGCAAGGAGCGTTTCATCGGCCCGGCTGCCCAGCTGGCTGAGCGTGGCGGAAAGTTTGACGCACTG
ATGGGCTCTCTTGAGATGGCTATGCGGTTCCAGAATGTGGAAGGTGACGAGGAGAGTGTGGAATTGGCCAAGGTC
CTCAAGGAGAACTCGCCTGCCGACGCTGCTGCCCAATTGACCGGCTTGGAACGAGACCACCCTCTCTTCCCCCAC
GTGGTCAAGGTCGTGGACCGCGTACAATCTGACGCAAAGTAG
Gene >Pro_DTO377G3_2|g7055.t1
ATGGAGAAGAAGGCTGTTCACTTCGGTGGTGGTAACATCGGCCGTGGCTTCGTGGCCGAGTTCCTCCACACGGCT
GGCTTTGAGGTCGTCTTCGTCGATGTCATGGACGGCATCATCACTGCTCTACAAAACACCAAGTCCTACGAGGTC
ACTGAGGTCAGTGATGAGGGCGAGTCTACCAAGACCATCACCAACTACCGTGCAATCAACTCCAAGACCCATGAG
AGCGATGTCATCAAGGAGATCTCAACCGCCAGTGTTGTAACCTGTGCCGTGGGTCCGAACATCCTCAAGTTTATC
GCTCCCGTCATTGCCAAGGGTATCGACGCCCGCACCGCCACCACACCGTTGGCCGTCATTGCCTGTGAGAACGCT
ATCGGTGCCACTGACACTCTACACCAGTTCATCAAAGACAACACCGCCCGAGACCGTGTTGGCTCTATGCCAGAC
CGAGCCCGGTTTGCTAACTCGGCCATTGACCGTATTGTACCTGGCCAGCCCGCCCACAGCGGTCTCAATGTACGC
ATCGAGAAGTTCTATGAATGGGCCGTGGAGTCCACTCCTTTCGGCGAGTTTGGTCACCCAGACATCCCAGCTATT
CACTGGGTCGGTCACCTGGAGCCCTACATTGAGCGCAAGTTGTTCACCGTCAACACCGGCCACGCCACTGCGGCC
TACTATGGCTACAATGCCGGCAAGAAGACCATTGCCGAAGCCCTCAAGGACCCTCGCATCCGCGGCATTGTCCGT
AACGTGCTTCAAGAGACTGCCTCCCTCATCATCGACAAACATGAGATCAGCGCCGCCGAGCAGCAGGAGTACGTC
GAGACCATCATCACCCGAATTTCCAACCACTACCTTGAGGACACGGTCGAGCGAGTGGGCCGTGCCCCAATGCGC
AAACTGTCCCGCAAGGAGCGTTTCATCGGCCCGGCTGCCCAGCTGGCTGAGCGTGGCGGAAAGTTTGACGCACTG
ATGGGCTCTCTTGAGATGGCTATGCGGTTCCAGAATGTGGAAGGTGACGAGGAGAGTGTGGAATTGGCCAAGGTC
CTCAAGGAGAACTCGCCTGCCGACGCTGCTGCCCAATTGACCGGCTTGGAACGAGACCACCCTCTCTTCCCCCAC
GTGGTCAAGGTCGTGGACCGCGTACAATCTGACGCAAAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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