Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7051.t1
Gene name
Locationscaffold_20:335236..336610
Strand-
Gene length (bp)1374
Transcript length (bp)1374
Coding sequence length (bp)1374
Protein length (aa) 458

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00415 RCC1 Regulator of chromosome condensation (RCC1) repeat 2.7E-10 2 60
PF00415 RCC1 Regulator of chromosome condensation (RCC1) repeat 1.3E-06 213 261
PF13540 RCC1_2 Regulator of chromosome condensation (RCC1) repeat 3.5E-07 47 75

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7051.t1
MRLFAFGSNGSGQLGIGHEEDVSTPTQCLFEQPEPPQNTNLPDGSEIITIAAGGNHTLLLTTNGSIYAAGCNADG
RCGPHKATKNPKEPESDNNGNILRFRQLIIPDAVSDTEVSKFKHVSATWEGTIAVASMPRRGSNNNNNNYNVVYG
RNPNPDTEDRVFVFGSSPKGELGVGPDTPAPVPGICIPSFPPAGLRITALASGMAHSAAVLSNGDVYGWGAARKG
QLGEENRGARIAYSPVRICVPFFAEAVACGREFTVVSGRGRFVVLGDRENRWGVLRIPESLSLRVDGGLGDHLRG
EDEEGHCEGAIRYRYTGIAASWHGVYVHAAPGLGRMEPSITDGALCTKSRFDSDSDSVSVGGSIVAWGRNDRGQL
PPPDLPTPVRLAVGSEHVLALLGDGRVAAFGWGEHGNCGPDTDSQGNVSGTYNVIPLPEAVGVDGKVVGVGAGCA
TSWIIVT*
Coding >Pro_DTO377G3_2|g7051.t1
ATGAGACTCTTCGCCTTCGGCTCTAATGGATCAGGCCAACTAGGCATCGGCCACGAAGAAGACGTCTCCACACCA
ACGCAATGTCTCTTCGAGCAGCCAGAGCCACCACAAAACACCAATCTCCCCGATGGATCAGAAATCATCACCATC
GCAGCAGGCGGAAACCACACCCTGCTCCTAACAACCAACGGCTCCATCTACGCCGCCGGCTGCAACGCAGACGGA
CGGTGCGGGCCGCACAAAGCAACCAAAAACCCGAAAGAGCCCGAGTCCGACAACAATGGAAACATCCTGCGCTTC
CGTCAACTGATCATCCCAGACGCAGTCTCCGACACAGAAGTATCCAAGTTTAAACATGTTTCCGCGACGTGGGAG
GGCACGATTGCTGTAGCGTCCATGCCACGACGCGGCAGCAATAACAATAACAATAACTATAACGTCGTCTACGGC
CGCAATCCAAATCCAGATACAGAAGATCGAGTCTTTGTATTTGGCTCCTCGCCCAAAGGGGAACTGGGTGTTGGT
CCAGACACCCCCGCCCCAGTCCCAGGTATCTGTATCCCCTCGTTCCCACCAGCGGGGTTGAGGATCACAGCGCTG
GCGAGCGGGATGGCGCATTCGGCAGCTGTGCTCTCGAATGGGGATGTTTATGGCTGGGGCGCGGCGCGGAAGGGC
CAGCTTGGGGAGGAGAACCGCGGGGCTAGGATTGCTTATTCGCCTGTGAGGATTTGCGTGCCGTTTTTTGCGGAG
GCTGTTGCTTGTGGGAGGGAGTTTACGGTTGTTTCGGGGCGCGGGCGGTTCGTTGTTCTTGGGGATAGGGAGAAT
CGGTGGGGGGTATTGCGGATTCCGGAAAGTTTGTCTTTGCGTGTGGATGGAGGTTTGGGGGATCATTTACGGGGT
GAGGATGAGGAAGGGCATTGTGAAGGTGCTATTCGTTATCGATATACTGGTATTGCGGCTAGTTGGCATGGGGTT
TATGTACATGCTGCGCCTGGGCTGGGACGGATGGAACCGTCGATAACGGACGGGGCGTTATGCACCAAGTCTCGA
TTTGATTCTGATTCTGATTCTGTCTCTGTCGGTGGTTCCATCGTTGCTTGGGGGCGCAATGATCGAGGTCAACTT
CCGCCCCCGGATCTTCCGACTCCTGTTAGACTCGCTGTTGGTAGTGAGCATGTCCTTGCTCTCCTAGGAGATGGT
CGAGTGGCGGCGTTTGGATGGGGTGAGCATGGGAACTGTGGACCCGATACAGATTCACAAGGGAATGTGTCGGGG
ACATATAATGTGATTCCGCTCCCCGAAGCCGTAGGAGTGGATGGGAAGGTTGTCGGAGTTGGAGCGGGATGTGCA
ACTAGCTGGATTATTGTGACATGA
Transcript >Pro_DTO377G3_2|g7051.t1
ATGAGACTCTTCGCCTTCGGCTCTAATGGATCAGGCCAACTAGGCATCGGCCACGAAGAAGACGTCTCCACACCA
ACGCAATGTCTCTTCGAGCAGCCAGAGCCACCACAAAACACCAATCTCCCCGATGGATCAGAAATCATCACCATC
GCAGCAGGCGGAAACCACACCCTGCTCCTAACAACCAACGGCTCCATCTACGCCGCCGGCTGCAACGCAGACGGA
CGGTGCGGGCCGCACAAAGCAACCAAAAACCCGAAAGAGCCCGAGTCCGACAACAATGGAAACATCCTGCGCTTC
CGTCAACTGATCATCCCAGACGCAGTCTCCGACACAGAAGTATCCAAGTTTAAACATGTTTCCGCGACGTGGGAG
GGCACGATTGCTGTAGCGTCCATGCCACGACGCGGCAGCAATAACAATAACAATAACTATAACGTCGTCTACGGC
CGCAATCCAAATCCAGATACAGAAGATCGAGTCTTTGTATTTGGCTCCTCGCCCAAAGGGGAACTGGGTGTTGGT
CCAGACACCCCCGCCCCAGTCCCAGGTATCTGTATCCCCTCGTTCCCACCAGCGGGGTTGAGGATCACAGCGCTG
GCGAGCGGGATGGCGCATTCGGCAGCTGTGCTCTCGAATGGGGATGTTTATGGCTGGGGCGCGGCGCGGAAGGGC
CAGCTTGGGGAGGAGAACCGCGGGGCTAGGATTGCTTATTCGCCTGTGAGGATTTGCGTGCCGTTTTTTGCGGAG
GCTGTTGCTTGTGGGAGGGAGTTTACGGTTGTTTCGGGGCGCGGGCGGTTCGTTGTTCTTGGGGATAGGGAGAAT
CGGTGGGGGGTATTGCGGATTCCGGAAAGTTTGTCTTTGCGTGTGGATGGAGGTTTGGGGGATCATTTACGGGGT
GAGGATGAGGAAGGGCATTGTGAAGGTGCTATTCGTTATCGATATACTGGTATTGCGGCTAGTTGGCATGGGGTT
TATGTACATGCTGCGCCTGGGCTGGGACGGATGGAACCGTCGATAACGGACGGGGCGTTATGCACCAAGTCTCGA
TTTGATTCTGATTCTGATTCTGTCTCTGTCGGTGGTTCCATCGTTGCTTGGGGGCGCAATGATCGAGGTCAACTT
CCGCCCCCGGATCTTCCGACTCCTGTTAGACTCGCTGTTGGTAGTGAGCATGTCCTTGCTCTCCTAGGAGATGGT
CGAGTGGCGGCGTTTGGATGGGGTGAGCATGGGAACTGTGGACCCGATACAGATTCACAAGGGAATGTGTCGGGG
ACATATAATGTGATTCCGCTCCCCGAAGCCGTAGGAGTGGATGGGAAGGTTGTCGGAGTTGGAGCGGGATGTGCA
ACTAGCTGGATTATTGTGACATGA
Gene >Pro_DTO377G3_2|g7051.t1
ATGAGACTCTTCGCCTTCGGCTCTAATGGATCAGGCCAACTAGGCATCGGCCACGAAGAAGACGTCTCCACACCA
ACGCAATGTCTCTTCGAGCAGCCAGAGCCACCACAAAACACCAATCTCCCCGATGGATCAGAAATCATCACCATC
GCAGCAGGCGGAAACCACACCCTGCTCCTAACAACCAACGGCTCCATCTACGCCGCCGGCTGCAACGCAGACGGA
CGGTGCGGGCCGCACAAAGCAACCAAAAACCCGAAAGAGCCCGAGTCCGACAACAATGGAAACATCCTGCGCTTC
CGTCAACTGATCATCCCAGACGCAGTCTCCGACACAGAAGTATCCAAGTTTAAACATGTTTCCGCGACGTGGGAG
GGCACGATTGCTGTAGCGTCCATGCCACGACGCGGCAGCAATAACAATAACAATAACTATAACGTCGTCTACGGC
CGCAATCCAAATCCAGATACAGAAGATCGAGTCTTTGTATTTGGCTCCTCGCCCAAAGGGGAACTGGGTGTTGGT
CCAGACACCCCCGCCCCAGTCCCAGGTATCTGTATCCCCTCGTTCCCACCAGCGGGGTTGAGGATCACAGCGCTG
GCGAGCGGGATGGCGCATTCGGCAGCTGTGCTCTCGAATGGGGATGTTTATGGCTGGGGCGCGGCGCGGAAGGGC
CAGCTTGGGGAGGAGAACCGCGGGGCTAGGATTGCTTATTCGCCTGTGAGGATTTGCGTGCCGTTTTTTGCGGAG
GCTGTTGCTTGTGGGAGGGAGTTTACGGTTGTTTCGGGGCGCGGGCGGTTCGTTGTTCTTGGGGATAGGGAGAAT
CGGTGGGGGGTATTGCGGATTCCGGAAAGTTTGTCTTTGCGTGTGGATGGAGGTTTGGGGGATCATTTACGGGGT
GAGGATGAGGAAGGGCATTGTGAAGGTGCTATTCGTTATCGATATACTGGTATTGCGGCTAGTTGGCATGGGGTT
TATGTACATGCTGCGCCTGGGCTGGGACGGATGGAACCGTCGATAACGGACGGGGCGTTATGCACCAAGTCTCGA
TTTGATTCTGATTCTGATTCTGTCTCTGTCGGTGGTTCCATCGTTGCTTGGGGGCGCAATGATCGAGGTCAACTT
CCGCCCCCGGATCTTCCGACTCCTGTTAGACTCGCTGTTGGTAGTGAGCATGTCCTTGCTCTCCTAGGAGATGGT
CGAGTGGCGGCGTTTGGATGGGGTGAGCATGGGAACTGTGGACCCGATACAGATTCACAAGGGAATGTGTCGGGG
ACATATAATGTGATTCCGCTCCCCGAAGCCGTAGGAGTGGATGGGAAGGTTGTCGGAGTTGGAGCGGGATGTGCA
ACTAGCTGGATTATTGTGACATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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