Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7032.t1
Gene name
Locationscaffold_20:278765..279432
Strand-
Gene length (bp)667
Transcript length (bp)561
Coding sequence length (bp)561
Protein length (aa) 187

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06417 DUF1077 Protein of unknown function (DUF1077) 1.3E-50 60 173

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

Domain # Start End Length
1 95 117 22
2 138 160 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7032.t1
MSQARLPPPPPPQWVVSLNSPMPRPSKAASSIPDPPGFSSSRGGKQRQQQQQQSITKRPDETDALKMKKAWEIAI
APSKQIPMNAIMMYMSGNSLQIFSIMMVLMLFKGPIQGLIGINAAFAKYETPSTHSRLLGVKVVYILMQLALLCL
GIWKVNAMGLLPTTRSDWLAWESERQPLERAHFAFR*
Coding >Pro_DTO377G3_2|g7032.t1
ATGTCACAAGCTCGTCTACCACCTCCTCCTCCTCCGCAATGGGTAGTTTCGTTGAACTCCCCGATGCCGCGCCCC
TCAAAGGCCGCATCCAGCATCCCAGACCCGCCAGGCTTCTCGAGCAGTCGGGGAGGCAAACAGCGCCAGCAACAA
CAGCAACAATCTATCACGAAGAGACCCGACGAGACCGACGCGCTTAAGATGAAGAAAGCGTGGGAGATTGCCATC
GCGCCATCCAAGCAGATCCCAATGAATGCCATTATGATGTACATGTCCGGCAACAGTCTTCAGATATTCAGCATT
ATGATGGTCCTCATGTTGTTTAAGGGTCCCATTCAGGGTCTGATAGGTATTAATGCGGCGTTCGCCAAGTACGAA
ACCCCGTCGACACATTCGCGTCTGCTTGGAGTGAAGGTGGTCTACATTTTGATGCAGTTGGCATTACTGTGCTTG
GGTATCTGGAAGGTTAATGCGATGGGACTATTGCCTACTACGAGATCGGATTGGTTAGCGTGGGAGTCGGAACGG
CAGCCTTTGGAGCGGGCTCATTTTGCTTTCAGGTGA
Transcript >Pro_DTO377G3_2|g7032.t1
ATGTCACAAGCTCGTCTACCACCTCCTCCTCCTCCGCAATGGGTAGTTTCGTTGAACTCCCCGATGCCGCGCCCC
TCAAAGGCCGCATCCAGCATCCCAGACCCGCCAGGCTTCTCGAGCAGTCGGGGAGGCAAACAGCGCCAGCAACAA
CAGCAACAATCTATCACGAAGAGACCCGACGAGACCGACGCGCTTAAGATGAAGAAAGCGTGGGAGATTGCCATC
GCGCCATCCAAGCAGATCCCAATGAATGCCATTATGATGTACATGTCCGGCAACAGTCTTCAGATATTCAGCATT
ATGATGGTCCTCATGTTGTTTAAGGGTCCCATTCAGGGTCTGATAGGTATTAATGCGGCGTTCGCCAAGTACGAA
ACCCCGTCGACACATTCGCGTCTGCTTGGAGTGAAGGTGGTCTACATTTTGATGCAGTTGGCATTACTGTGCTTG
GGTATCTGGAAGGTTAATGCGATGGGACTATTGCCTACTACGAGATCGGATTGGTTAGCGTGGGAGTCGGAACGG
CAGCCTTTGGAGCGGGCTCATTTTGCTTTCAGGTGA
Gene >Pro_DTO377G3_2|g7032.t1
ATGTCACAAGCTCGTCTACCACCTCCTCCTCCTCCGCAATGGGTAGTTTCGTTGAACTCCCCGATGCCGCGCCCC
TCAAAGGCCGCATCCAGCATCCCAGACCCGCCAGGCTTCTCGAGCAGTCGGGGAGGCAAACAGGTGAGTTCTACC
ACAAATCATGACAAATGGTCGTGAAGATACTAATGCGGTTTTCAGCGCCAGCAACAACAGCAACAATCTATCACG
AAGAGACCCGACGAGACCGACGCGCTTAAGATGAAGAAAGCGTGGGAGATTGCCATCGCGCCATCCAAGCAGATC
CCAATGAATGCCATTATGATGTACATGTCCGGCAACAGTCTTCAGATATTCAGCATTATGATGGTCCTCATGTTG
TTTAAGGGTCCCATTCAGGGTCTGATAGGTATTAATGCGGCGTTCGCCAAGTACGAAACCCCGTCGACACATTCG
CGTCTGCTTGGAGTGAAGGTGGTCTACATTTTGATGCAGTTGGCATTACTGTGCTTGGGTATCTGGAAGGTTAAT
GCGATGGGACTATTGCCGTAAGTCTTGCTCTCCAGCTTTGACGCTTATTTGCTAACATGTGTCCAGTACTACGAG
ATCGGATTGGTTAGCGTGGGAGTCGGAACGGCAGCCTTTGGAGCGGGCTCATTTTGCTTTCAGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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