© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO377G3_2|g7031.t1 |
| Gene name | |
| Location | scaffold_20:276929..278527 |
| Strand | + |
| Gene length (bp) | 1598 |
| Transcript length (bp) | 1539 |
| Coding sequence length (bp) | 1539 |
| Protein length (aa) | 513 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 5.0E-52 | 48 | 446 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 2.8E-11 | 50 | 221 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 58 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 41 | 63 | 22 |
| 2 | 78 | 100 | 22 |
| 3 | 107 | 126 | 19 |
| 4 | 194 | 216 | 22 |
| 5 | 282 | 304 | 22 |
| 6 | 315 | 337 | 22 |
| 7 | 372 | 391 | 19 |
| 8 | 401 | 423 | 22 |
| 9 | 435 | 452 | 17 |
| 10 | 462 | 484 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g7031.t1 MEKEIKQPSVSQPESGEDAGTRSGDLADVDYSVFTVSQRRYIVFMASWAGFFSPVSSQIYFPALNTLAKDLHVSN SLINLTLTSYMIFQGLSPMFIGDFADKAGRRPAYIVCFTIYIAANIGLALQNNYAALFVLRCLQSAGSSTTIALS SGVVADVATASQRGSYMGFVTAGSLMGPSVGPVIGGLLSQYLGWRAIFWFLTIFAAAFMVPFLIFFPETARGIVG DGSLPPQKWNMSLISYLDSRKAREGVISTAIVSKQKLKFPNPFQTLAIVFQKDTSLILFCNAILFAGFYDVSASI PAIFNELYGLDDLQIGLCYIPFGLGATIASVINGKFLDFNYRRLAKQLNFPLTKNRETDLRNFPIEKARLQLAFP LLTLGSISVLVFGWFLNFGIHLAAPTCILFLMGLTLTGAFNTISTLLVDLYPTQAAKATAANNFGRCLLGAGATA LIDPMLSAMGRGWCFTFIALVMMATTPLLLIVIQKGPDWREERRLKEAAKKTVDGNASRSQK* |
| Coding | >Pro_DTO377G3_2|g7031.t1 ATGGAGAAGGAAATAAAACAACCATCTGTTTCGCAACCGGAATCTGGTGAAGATGCGGGAACGAGAAGCGGGGAT CTTGCTGATGTCGACTACTCGGTCTTCACAGTCAGTCAGCGCAGGTATATTGTCTTTATGGCCTCTTGGGCTGGG TTCTTCTCCCCTGTCTCTTCTCAGATCTACTTTCCCGCGTTGAATACCTTGGCGAAAGACCTGCATGTATCAAAT TCGTTGATCAATTTGACTTTGACGAGTTATATGATCTTCCAAGGGCTGTCGCCCATGTTCATTGGTGACTTTGCG GATAAAGCTGGCCGACGACCAGCATATATCGTGTGCTTCACCATCTATATCGCAGCAAATATTGGACTTGCCCTA CAAAACAATTATGCAGCTCTTTTTGTTCTCCGGTGCTTGCAAAGTGCAGGGAGCAGCACCACCATCGCGCTCTCG TCGGGGGTGGTCGCCGATGTAGCCACTGCATCACAACGGGGTTCCTACATGGGATTCGTCACCGCAGGATCTCTC ATGGGTCCCTCTGTCGGTCCAGTAATTGGAGGTCTTTTGTCTCAATATTTGGGCTGGCGGGCGATCTTCTGGTTT CTGACCATTTTTGCAGCGGCTTTCATGGTTCCATTTCTGATTTTCTTCCCGGAAACTGCTCGTGGTATTGTCGGT GATGGCTCGTTGCCTCCTCAGAAATGGAATATGTCCCTGATCAGCTACCTGGACTCCCGAAAGGCTCGTGAAGGC GTCATATCTACCGCAATTGTATCCAAACAGAAACTCAAGTTTCCCAATCCCTTCCAGACGCTTGCCATTGTATTC CAGAAGGATACCAGTCTCATCCTCTTCTGCAATGCTATTCTTTTTGCTGGATTCTACGACGTGAGCGCAAGCATT CCTGCTATCTTCAATGAGCTCTATGGGCTAGACGACCTCCAAATTGGTCTCTGCTATATTCCGTTTGGCCTTGGT GCGACCATTGCTTCTGTTATCAATGGCAAATTCTTGGATTTCAACTACCGCCGTCTTGCAAAGCAATTGAACTTC CCGCTAACCAAGAACCGCGAAACTGACTTGCGAAACTTTCCTATTGAAAAAGCTCGTCTTCAGCTCGCATTCCCT CTTCTCACGTTAGGAAGCATATCCGTCCTTGTGTTTGGGTGGTTTTTGAACTTTGGAATTCATCTCGCTGCGCCA ACGTGTATTCTATTCCTCATGGGATTGACATTGACAGGGGCTTTCAATACCATCAGTACACTCCTGGTAGACCTA TATCCAACACAAGCAGCCAAGGCCACTGCAGCCAATAATTTCGGGCGTTGCTTACTGGGAGCTGGCGCGACGGCA CTCATCGATCCTATGCTCTCTGCCATGGGCCGGGGCTGGTGTTTCACATTCATCGCGTTGGTGATGATGGCCACG ACACCGCTGCTATTAATCGTGATTCAGAAAGGGCCGGATTGGCGTGAAGAGCGTCGTCTGAAAGAGGCAGCCAAG AAAACCGTGGATGGGAATGCCTCAAGAAGTCAGAAGTGA |
| Transcript | >Pro_DTO377G3_2|g7031.t1 ATGGAGAAGGAAATAAAACAACCATCTGTTTCGCAACCGGAATCTGGTGAAGATGCGGGAACGAGAAGCGGGGAT CTTGCTGATGTCGACTACTCGGTCTTCACAGTCAGTCAGCGCAGGTATATTGTCTTTATGGCCTCTTGGGCTGGG TTCTTCTCCCCTGTCTCTTCTCAGATCTACTTTCCCGCGTTGAATACCTTGGCGAAAGACCTGCATGTATCAAAT TCGTTGATCAATTTGACTTTGACGAGTTATATGATCTTCCAAGGGCTGTCGCCCATGTTCATTGGTGACTTTGCG GATAAAGCTGGCCGACGACCAGCATATATCGTGTGCTTCACCATCTATATCGCAGCAAATATTGGACTTGCCCTA CAAAACAATTATGCAGCTCTTTTTGTTCTCCGGTGCTTGCAAAGTGCAGGGAGCAGCACCACCATCGCGCTCTCG TCGGGGGTGGTCGCCGATGTAGCCACTGCATCACAACGGGGTTCCTACATGGGATTCGTCACCGCAGGATCTCTC ATGGGTCCCTCTGTCGGTCCAGTAATTGGAGGTCTTTTGTCTCAATATTTGGGCTGGCGGGCGATCTTCTGGTTT CTGACCATTTTTGCAGCGGCTTTCATGGTTCCATTTCTGATTTTCTTCCCGGAAACTGCTCGTGGTATTGTCGGT GATGGCTCGTTGCCTCCTCAGAAATGGAATATGTCCCTGATCAGCTACCTGGACTCCCGAAAGGCTCGTGAAGGC GTCATATCTACCGCAATTGTATCCAAACAGAAACTCAAGTTTCCCAATCCCTTCCAGACGCTTGCCATTGTATTC CAGAAGGATACCAGTCTCATCCTCTTCTGCAATGCTATTCTTTTTGCTGGATTCTACGACGTGAGCGCAAGCATT CCTGCTATCTTCAATGAGCTCTATGGGCTAGACGACCTCCAAATTGGTCTCTGCTATATTCCGTTTGGCCTTGGT GCGACCATTGCTTCTGTTATCAATGGCAAATTCTTGGATTTCAACTACCGCCGTCTTGCAAAGCAATTGAACTTC CCGCTAACCAAGAACCGCGAAACTGACTTGCGAAACTTTCCTATTGAAAAAGCTCGTCTTCAGCTCGCATTCCCT CTTCTCACGTTAGGAAGCATATCCGTCCTTGTGTTTGGGTGGTTTTTGAACTTTGGAATTCATCTCGCTGCGCCA ACGTGTATTCTATTCCTCATGGGATTGACATTGACAGGGGCTTTCAATACCATCAGTACACTCCTGGTAGACCTA TATCCAACACAAGCAGCCAAGGCCACTGCAGCCAATAATTTCGGGCGTTGCTTACTGGGAGCTGGCGCGACGGCA CTCATCGATCCTATGCTCTCTGCCATGGGCCGGGGCTGGTGTTTCACATTCATCGCGTTGGTGATGATGGCCACG ACACCGCTGCTATTAATCGTGATTCAGAAAGGGCCGGATTGGCGTGAAGAGCGTCGTCTGAAAGAGGCAGCCAAG AAAACCGTGGATGGGAATGCCTCAAGAAGTCAGAAGTGA |
| Gene | >Pro_DTO377G3_2|g7031.t1 ATGGAGAAGGAAATAAAACAACCATCTGTTTCGCAACCGGAATCTGGTGAAGATGCGGGAACGAGAAGCGGGGAT CTTGCTGATGTCGACTACTCGGTCTTCACAGTCAGTCAGCGCAGGTATATTGTCTTTATGGCCTCTTGGGCTGGG TTCTTCTCCCCTGTCTCTTCTCAGATCTACTTTCCCGCGTTGAATACCTTGGCGAAAGACCTGCATGTATCAAAT TCGTTGATCAATTTGACTTTGACGAGTTATATGGTACGCCTTCTTATGTGTACAGGACCATCTCCTTTTTGGCTT GACTAACGTGAATGCAGATCTTCCAAGGGCTGTCGCCCATGTTCATTGGTGACTTTGCGGATAAAGCTGGCCGAC GACCAGCATATATCGTGTGCTTCACCATCTATATCGCAGCAAATATTGGACTTGCCCTACAAAACAATTATGCAG CTCTTTTTGTTCTCCGGTGCTTGCAAAGTGCAGGGAGCAGCACCACCATCGCGCTCTCGTCGGGGGTGGTCGCCG ATGTAGCCACTGCATCACAACGGGGTTCCTACATGGGATTCGTCACCGCAGGATCTCTCATGGGTCCCTCTGTCG GTCCAGTAATTGGAGGTCTTTTGTCTCAATATTTGGGCTGGCGGGCGATCTTCTGGTTTCTGACCATTTTTGCAG CGGCTTTCATGGTTCCATTTCTGATTTTCTTCCCGGAAACTGCTCGTGGTATTGTCGGTGATGGCTCGTTGCCTC CTCAGAAATGGAATATGTCCCTGATCAGCTACCTGGACTCCCGAAAGGCTCGTGAAGGCGTCATATCTACCGCAA TTGTATCCAAACAGAAACTCAAGTTTCCCAATCCCTTCCAGACGCTTGCCATTGTATTCCAGAAGGATACCAGTC TCATCCTCTTCTGCAATGCTATTCTTTTTGCTGGATTCTACGACGTGAGCGCAAGCATTCCTGCTATCTTCAATG AGCTCTATGGGCTAGACGACCTCCAAATTGGTCTCTGCTATATTCCGTTTGGCCTTGGTGCGACCATTGCTTCTG TTATCAATGGCAAATTCTTGGATTTCAACTACCGCCGTCTTGCAAAGCAATTGAACTTCCCGCTAACCAAGAACC GCGAAACTGACTTGCGAAACTTTCCTATTGAAAAAGCTCGTCTTCAGCTCGCATTCCCTCTTCTCACGTTAGGAA GCATATCCGTCCTTGTGTTTGGGTGGTTTTTGAACTTTGGAATTCATCTCGCTGCGCCAACGTGTATTCTATTCC TCATGGGATTGACATTGACAGGGGCTTTCAATACCATCAGTACACTCCTGGTAGACCTATATCCAACACAAGCAG CCAAGGCCACTGCAGCCAATAATTTCGGGCGTTGCTTACTGGGAGCTGGCGCGACGGCACTCATCGATCCTATGC TCTCTGCCATGGGCCGGGGCTGGTGTTTCACATTCATCGCGTTGGTGATGATGGCCACGACACCGCTGCTATTAA TCGTGATTCAGAAAGGGCCGGATTGGCGTGAAGAGCGTCGTCTGAAAGAGGCAGCCAAGAAAACCGTGGATGGGA ATGCCTCAAGAAGTCAGAAGTGA |