Protein ID | Pro_DTO377G3_2|g702.t1 |
Gene name | |
Location | scaffold_01:1823000..1825922 |
Strand | + |
Gene length (bp) | 2922 |
Transcript length (bp) | 2874 |
Coding sequence length (bp) | 2874 |
Protein length (aa) | 958 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13920 | zf-C3HC4_3 | Zinc finger, C3HC4 type (RING finger) | 1.4E-08 | 904 | 948 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 123 | 145 | 22 |
2 | 166 | 188 | 22 |
3 | 247 | 269 | 22 |
4 | 353 | 370 | 17 |
5 | 385 | 407 | 22 |
6 | 419 | 441 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g702.t1 MSSGVEPSSIPTSSAALLQHLNTTLSPEPSPLSSLPHQLLTSPLRAFQHAETFAFRTVPRTFARITGIKALGQTI WGGAGSTSGASGTAATHAAEMAANEFADTASQESGYYIAELLGAMKKLGGFFGYLTSLWSFACLVEALILNRITI YASTRRHLRLGWERRAALRLIPILLFVSQILSLLRGIRCQTSPSFSTMRYGSPGKQLVFDYSSDGGALYSISSTL LGWESEERSCAAVRMARGTNPGVPYGSFSLLWPTFMLLCLSHFIETLSCALQGKPVMTETGMSIFEHSIAFAEAE SMISKSIGLGLFGLPKQSPLSALSGGSDANSTSVFELLTRSQVLERMNVTPELLLIVLISCCNSATSHILEVFGK QSKYRLFSTAFWGACFMIAMLWGLDGGPPVSLETGVLRFPTVCIVGFIPHIFLLGGIVICLSIYTLALTITAFSL PSDDQPVSLYDRFLMAHENMQGSNQIRSIRINRHEDFYTTLLRIGYVALTAASEAVFLNEGQSVVARRMTWLEED RLSEIEASRRKSSSYGNWQSQTRSRPIEAMGFSSFDMPEQSAWESGYNREKKIEKPKNGTRAVQSRAELGGVGAV RVSIRLWHVLSFFRAISLLMLRWVAYGLNNVLDRLGINARPMWLKRMVGHRGKKSNTDKTNPSQPLDFWILSENG ELELPDDHDFDVEIEMRKRERANRPDWMGSDESRLEDRLYSWWKIGGAWGNQDQTSDYSPPSDDFDTTSVVSMST NASDSEWEDNLSEDGRRTPTQLDPYADRASPPLQDPLIDMSTLARLLDPRDRESREEARILAAHLKTNPDNPQIM TRSRYQKQVERERSRIIFSSRLQQLNAMNSESEGRKPTPEEEAELLEKLILSRRSETSGISDSHTWESGATGLGP NGPPCVVCQTSPRAIITWPCRCLCICEDCRVSLAMNNFGSCVTCRQEVVGFMRLWVP* |
Coding | >Pro_DTO377G3_2|g702.t1 ATGTCAAGCGGCGTGGAACCCTCCTCAATACCAACATCTAGTGCGGCTTTGTTACAACATTTGAATACAACATTA TCACCGGAGCCCTCTCCTTTGTCCTCTTTGCCGCATCAACTCCTGACCTCCCCCCTTCGCGCCTTTCAACACGCC GAGACCTTTGCCTTCCGAACGGTTCCCCGAACTTTCGCTAGAATAACTGGAATTAAAGCCCTTGGCCAAACTATC TGGGGCGGGGCTGGTTCAACATCTGGAGCCAGCGGTACGGCCGCAACACATGCAGCGGAGATGGCTGCAAATGAG TTCGCCGATACAGCTAGCCAGGAGAGTGGCTACTACATTGCGGAGCTCTTGGGTGCTATGAAGAAGCTTGGTGGA TTCTTTGGGTATTTGACAAGTCTTTGGTCATTTGCTTGTCTGGTGGAGGCGCTCATCCTAAACCGAATTACTATC TATGCATCCACACGGCGACACCTTCGACTAGGATGGGAAAGGCGTGCGGCTCTCCGATTGATTCCTATCCTTCTC TTCGTCTCCCAAATCCTTAGCCTGCTCCGTGGAATCCGATGTCAGACATCGCCGTCTTTTTCGACAATGCGCTAC GGATCTCCCGGGAAGCAACTCGTATTCGACTATTCCAGTGACGGGGGTGCTCTTTACTCAATCAGCTCGACTCTT TTAGGATGGGAGTCCGAGGAACGGTCGTGTGCTGCTGTGAGGATGGCGCGCGGAACCAACCCGGGTGTCCCATAT GGATCATTTTCCCTACTCTGGCCGACATTCATGCTCCTTTGTTTGAGTCACTTCATCGAAACACTCTCTTGCGCA TTGCAAGGCAAGCCTGTGATGACTGAGACGGGGATGTCCATCTTCGAGCACTCAATCGCCTTCGCAGAAGCCGAG TCGATGATCAGTAAATCTATCGGACTAGGCCTGTTCGGTCTTCCTAAACAAAGCCCTCTTAGTGCGCTTTCTGGT GGGTCTGATGCTAACTCAACTTCGGTCTTTGAACTTCTCACAAGGTCGCAAGTTTTGGAACGCATGAATGTCACA CCCGAACTGCTACTTATTGTATTGATATCGTGCTGCAATAGTGCAACTTCGCACATACTAGAAGTCTTCGGCAAG CAGAGCAAATATCGGCTTTTCAGCACTGCATTTTGGGGTGCCTGCTTCATGATAGCCATGTTGTGGGGGTTAGAT GGCGGTCCGCCCGTCAGCCTCGAAACCGGCGTGCTCAGGTTCCCGACTGTTTGCATTGTGGGATTCATCCCTCAT ATCTTTTTACTGGGCGGCATCGTGATTTGTCTCTCAATATACACTTTAGCACTTACAATCACCGCTTTTTCGCTG CCATCGGACGATCAACCTGTCTCCCTCTATGACCGCTTCTTGATGGCGCATGAGAATATGCAAGGCTCGAACCAG ATAAGGAGCATCCGTATTAACAGACACGAAGACTTTTATACAACGTTGCTTCGGATCGGGTATGTTGCCCTAACT GCGGCAAGTGAGGCTGTGTTCTTGAACGAGGGCCAATCAGTCGTTGCACGGCGGATGACGTGGTTAGAAGAGGAT CGCCTTTCTGAAATTGAAGCCTCTAGGCGGAAGTCTTCATCTTATGGGAACTGGCAGAGTCAGACCAGAAGTCGG CCTATCGAGGCTATGGGTTTCTCAAGTTTCGACATGCCAGAACAATCTGCTTGGGAGAGTGGCTACAACCGCGAA AAAAAGATTGAGAAACCCAAGAACGGTACTCGAGCCGTACAATCTCGAGCCGAGCTTGGGGGAGTTGGCGCAGTG CGAGTATCGATTAGATTGTGGCATGTCCTCTCGTTCTTCCGCGCAATTTCCCTCCTTATGCTCCGTTGGGTTGCA TATGGACTCAACAATGTGCTTGATCGACTAGGGATAAACGCTCGGCCAATGTGGCTCAAACGCATGGTGGGTCAT CGTGGAAAGAAGTCTAATACCGACAAGACGAACCCATCACAGCCATTAGATTTCTGGATTCTCTCGGAAAATGGA GAGCTTGAGCTCCCCGATGACCATGACTTTGATGTCGAGATCGAGATGAGGAAGCGAGAGCGCGCGAATCGGCCA GACTGGATGGGCTCGGATGAAAGCCGGCTAGAGGACAGACTCTACAGCTGGTGGAAAATTGGCGGTGCATGGGGA AACCAAGATCAAACCTCTGATTATTCTCCGCCCTCTGATGACTTCGACACCACGAGCGTGGTGTCCATGTCTACC AACGCCTCGGATTCAGAATGGGAGGATAACCTATCGGAAGATGGTCGTCGAACCCCTACCCAGCTCGATCCGTAT GCAGACAGGGCAAGCCCACCACTCCAAGATCCCCTGATCGACATGAGCACACTCGCCCGTCTTCTTGACCCGCGC GACCGCGAGAGCAGAGAAGAGGCCAGGATTCTAGCCGCCCATCTTAAAACAAACCCGGACAACCCACAGATCATG ACGCGCAGTCGCTACCAGAAACAAGTTGAAAGGGAGAGATCCCGAATCATCTTCTCATCCCGCCTCCAGCAGCTG AACGCTATGAACTCAGAATCCGAAGGGCGGAAACCTACTCCAGAAGAGGAAGCTGAACTCCTCGAGAAGCTCATT CTTTCCCGTCGCTCAGAAACCTCGGGCATTTCCGACTCCCATACATGGGAATCCGGGGCAACAGGCCTCGGACCC AATGGTCCACCCTGTGTGGTCTGCCAGACAAGCCCACGGGCCATTATCACCTGGCCCTGTCGCTGTCTATGCATT TGCGAGGACTGTCGCGTGAGCCTTGCCATGAACAACTTCGGCAGCTGCGTGACTTGTCGCCAGGAAGTCGTAGGC TTCATGCGCTTATGGGTTCCATAA |
Transcript | >Pro_DTO377G3_2|g702.t1 ATGTCAAGCGGCGTGGAACCCTCCTCAATACCAACATCTAGTGCGGCTTTGTTACAACATTTGAATACAACATTA TCACCGGAGCCCTCTCCTTTGTCCTCTTTGCCGCATCAACTCCTGACCTCCCCCCTTCGCGCCTTTCAACACGCC GAGACCTTTGCCTTCCGAACGGTTCCCCGAACTTTCGCTAGAATAACTGGAATTAAAGCCCTTGGCCAAACTATC TGGGGCGGGGCTGGTTCAACATCTGGAGCCAGCGGTACGGCCGCAACACATGCAGCGGAGATGGCTGCAAATGAG TTCGCCGATACAGCTAGCCAGGAGAGTGGCTACTACATTGCGGAGCTCTTGGGTGCTATGAAGAAGCTTGGTGGA TTCTTTGGGTATTTGACAAGTCTTTGGTCATTTGCTTGTCTGGTGGAGGCGCTCATCCTAAACCGAATTACTATC TATGCATCCACACGGCGACACCTTCGACTAGGATGGGAAAGGCGTGCGGCTCTCCGATTGATTCCTATCCTTCTC TTCGTCTCCCAAATCCTTAGCCTGCTCCGTGGAATCCGATGTCAGACATCGCCGTCTTTTTCGACAATGCGCTAC GGATCTCCCGGGAAGCAACTCGTATTCGACTATTCCAGTGACGGGGGTGCTCTTTACTCAATCAGCTCGACTCTT TTAGGATGGGAGTCCGAGGAACGGTCGTGTGCTGCTGTGAGGATGGCGCGCGGAACCAACCCGGGTGTCCCATAT GGATCATTTTCCCTACTCTGGCCGACATTCATGCTCCTTTGTTTGAGTCACTTCATCGAAACACTCTCTTGCGCA TTGCAAGGCAAGCCTGTGATGACTGAGACGGGGATGTCCATCTTCGAGCACTCAATCGCCTTCGCAGAAGCCGAG TCGATGATCAGTAAATCTATCGGACTAGGCCTGTTCGGTCTTCCTAAACAAAGCCCTCTTAGTGCGCTTTCTGGT GGGTCTGATGCTAACTCAACTTCGGTCTTTGAACTTCTCACAAGGTCGCAAGTTTTGGAACGCATGAATGTCACA CCCGAACTGCTACTTATTGTATTGATATCGTGCTGCAATAGTGCAACTTCGCACATACTAGAAGTCTTCGGCAAG CAGAGCAAATATCGGCTTTTCAGCACTGCATTTTGGGGTGCCTGCTTCATGATAGCCATGTTGTGGGGGTTAGAT GGCGGTCCGCCCGTCAGCCTCGAAACCGGCGTGCTCAGGTTCCCGACTGTTTGCATTGTGGGATTCATCCCTCAT ATCTTTTTACTGGGCGGCATCGTGATTTGTCTCTCAATATACACTTTAGCACTTACAATCACCGCTTTTTCGCTG CCATCGGACGATCAACCTGTCTCCCTCTATGACCGCTTCTTGATGGCGCATGAGAATATGCAAGGCTCGAACCAG ATAAGGAGCATCCGTATTAACAGACACGAAGACTTTTATACAACGTTGCTTCGGATCGGGTATGTTGCCCTAACT GCGGCAAGTGAGGCTGTGTTCTTGAACGAGGGCCAATCAGTCGTTGCACGGCGGATGACGTGGTTAGAAGAGGAT CGCCTTTCTGAAATTGAAGCCTCTAGGCGGAAGTCTTCATCTTATGGGAACTGGCAGAGTCAGACCAGAAGTCGG CCTATCGAGGCTATGGGTTTCTCAAGTTTCGACATGCCAGAACAATCTGCTTGGGAGAGTGGCTACAACCGCGAA AAAAAGATTGAGAAACCCAAGAACGGTACTCGAGCCGTACAATCTCGAGCCGAGCTTGGGGGAGTTGGCGCAGTG CGAGTATCGATTAGATTGTGGCATGTCCTCTCGTTCTTCCGCGCAATTTCCCTCCTTATGCTCCGTTGGGTTGCA TATGGACTCAACAATGTGCTTGATCGACTAGGGATAAACGCTCGGCCAATGTGGCTCAAACGCATGGTGGGTCAT CGTGGAAAGAAGTCTAATACCGACAAGACGAACCCATCACAGCCATTAGATTTCTGGATTCTCTCGGAAAATGGA GAGCTTGAGCTCCCCGATGACCATGACTTTGATGTCGAGATCGAGATGAGGAAGCGAGAGCGCGCGAATCGGCCA GACTGGATGGGCTCGGATGAAAGCCGGCTAGAGGACAGACTCTACAGCTGGTGGAAAATTGGCGGTGCATGGGGA AACCAAGATCAAACCTCTGATTATTCTCCGCCCTCTGATGACTTCGACACCACGAGCGTGGTGTCCATGTCTACC AACGCCTCGGATTCAGAATGGGAGGATAACCTATCGGAAGATGGTCGTCGAACCCCTACCCAGCTCGATCCGTAT GCAGACAGGGCAAGCCCACCACTCCAAGATCCCCTGATCGACATGAGCACACTCGCCCGTCTTCTTGACCCGCGC GACCGCGAGAGCAGAGAAGAGGCCAGGATTCTAGCCGCCCATCTTAAAACAAACCCGGACAACCCACAGATCATG ACGCGCAGTCGCTACCAGAAACAAGTTGAAAGGGAGAGATCCCGAATCATCTTCTCATCCCGCCTCCAGCAGCTG AACGCTATGAACTCAGAATCCGAAGGGCGGAAACCTACTCCAGAAGAGGAAGCTGAACTCCTCGAGAAGCTCATT CTTTCCCGTCGCTCAGAAACCTCGGGCATTTCCGACTCCCATACATGGGAATCCGGGGCAACAGGCCTCGGACCC AATGGTCCACCCTGTGTGGTCTGCCAGACAAGCCCACGGGCCATTATCACCTGGCCCTGTCGCTGTCTATGCATT TGCGAGGACTGTCGCGTGAGCCTTGCCATGAACAACTTCGGCAGCTGCGTGACTTGTCGCCAGGAAGTCGTAGGC TTCATGCGCTTATGGGTTCCATAA |
Gene | >Pro_DTO377G3_2|g702.t1 ATGTCAAGCGGCGTGGAACCCTCCTCAATACCAACATCTAGTGCGGCTTTGTTACAACATTTGAATACAACATTA TCACCGGAGCCCTCTCCTTTGTCCTCTTTGCCGCATCAACTCCTGACCTCCCCCCTTCGCGCCTTTCAACACGCC GAGACCTTTGCCTTCCGAACGGTTCCCCGAACTTTCGCTAGAATAACTGGAATTAAAGCCCTTGGCCAAACTATC TGGGGCGGGGCTGGTTCAACATCTGGAGCCAGCGGTACGGCCGCAACACATGCAGCGGAGATGGCTGCAAATGAG TTCGCCGATACAGCTAGCCAGGAGAGTGGCTACTACATTGCGGAGCTCTTGGGTGCTATGAAGAAGCTTGGTGGA TTCTTTGGGTATTTGACAAGTCTTTGGTCATTTGCTTGTCTGGTGGAGGTGAGACCCCGCTCTTGACTTGTATAC TTACCATGCTGATGGGTCTAGGCGCTCATCCTAAACCGAATTACTATCTATGCATCCACACGGCGACACCTTCGA CTAGGATGGGAAAGGCGTGCGGCTCTCCGATTGATTCCTATCCTTCTCTTCGTCTCCCAAATCCTTAGCCTGCTC CGTGGAATCCGATGTCAGACATCGCCGTCTTTTTCGACAATGCGCTACGGATCTCCCGGGAAGCAACTCGTATTC GACTATTCCAGTGACGGGGGTGCTCTTTACTCAATCAGCTCGACTCTTTTAGGATGGGAGTCCGAGGAACGGTCG TGTGCTGCTGTGAGGATGGCGCGCGGAACCAACCCGGGTGTCCCATATGGATCATTTTCCCTACTCTGGCCGACA TTCATGCTCCTTTGTTTGAGTCACTTCATCGAAACACTCTCTTGCGCATTGCAAGGCAAGCCTGTGATGACTGAG ACGGGGATGTCCATCTTCGAGCACTCAATCGCCTTCGCAGAAGCCGAGTCGATGATCAGTAAATCTATCGGACTA GGCCTGTTCGGTCTTCCTAAACAAAGCCCTCTTAGTGCGCTTTCTGGTGGGTCTGATGCTAACTCAACTTCGGTC TTTGAACTTCTCACAAGGTCGCAAGTTTTGGAACGCATGAATGTCACACCCGAACTGCTACTTATTGTATTGATA TCGTGCTGCAATAGTGCAACTTCGCACATACTAGAAGTCTTCGGCAAGCAGAGCAAATATCGGCTTTTCAGCACT GCATTTTGGGGTGCCTGCTTCATGATAGCCATGTTGTGGGGGTTAGATGGCGGTCCGCCCGTCAGCCTCGAAACC GGCGTGCTCAGGTTCCCGACTGTTTGCATTGTGGGATTCATCCCTCATATCTTTTTACTGGGCGGCATCGTGATT TGTCTCTCAATATACACTTTAGCACTTACAATCACCGCTTTTTCGCTGCCATCGGACGATCAACCTGTCTCCCTC TATGACCGCTTCTTGATGGCGCATGAGAATATGCAAGGCTCGAACCAGATAAGGAGCATCCGTATTAACAGACAC GAAGACTTTTATACAACGTTGCTTCGGATCGGGTATGTTGCCCTAACTGCGGCAAGTGAGGCTGTGTTCTTGAAC GAGGGCCAATCAGTCGTTGCACGGCGGATGACGTGGTTAGAAGAGGATCGCCTTTCTGAAATTGAAGCCTCTAGG CGGAAGTCTTCATCTTATGGGAACTGGCAGAGTCAGACCAGAAGTCGGCCTATCGAGGCTATGGGTTTCTCAAGT TTCGACATGCCAGAACAATCTGCTTGGGAGAGTGGCTACAACCGCGAAAAAAAGATTGAGAAACCCAAGAACGGT ACTCGAGCCGTACAATCTCGAGCCGAGCTTGGGGGAGTTGGCGCAGTGCGAGTATCGATTAGATTGTGGCATGTC CTCTCGTTCTTCCGCGCAATTTCCCTCCTTATGCTCCGTTGGGTTGCATATGGACTCAACAATGTGCTTGATCGA CTAGGGATAAACGCTCGGCCAATGTGGCTCAAACGCATGGTGGGTCATCGTGGAAAGAAGTCTAATACCGACAAG ACGAACCCATCACAGCCATTAGATTTCTGGATTCTCTCGGAAAATGGAGAGCTTGAGCTCCCCGATGACCATGAC TTTGATGTCGAGATCGAGATGAGGAAGCGAGAGCGCGCGAATCGGCCAGACTGGATGGGCTCGGATGAAAGCCGG CTAGAGGACAGACTCTACAGCTGGTGGAAAATTGGCGGTGCATGGGGAAACCAAGATCAAACCTCTGATTATTCT CCGCCCTCTGATGACTTCGACACCACGAGCGTGGTGTCCATGTCTACCAACGCCTCGGATTCAGAATGGGAGGAT AACCTATCGGAAGATGGTCGTCGAACCCCTACCCAGCTCGATCCGTATGCAGACAGGGCAAGCCCACCACTCCAA GATCCCCTGATCGACATGAGCACACTCGCCCGTCTTCTTGACCCGCGCGACCGCGAGAGCAGAGAAGAGGCCAGG ATTCTAGCCGCCCATCTTAAAACAAACCCGGACAACCCACAGATCATGACGCGCAGTCGCTACCAGAAACAAGTT GAAAGGGAGAGATCCCGAATCATCTTCTCATCCCGCCTCCAGCAGCTGAACGCTATGAACTCAGAATCCGAAGGG CGGAAACCTACTCCAGAAGAGGAAGCTGAACTCCTCGAGAAGCTCATTCTTTCCCGTCGCTCAGAAACCTCGGGC ATTTCCGACTCCCATACATGGGAATCCGGGGCAACAGGCCTCGGACCCAATGGTCCACCCTGTGTGGTCTGCCAG ACAAGCCCACGGGCCATTATCACCTGGCCCTGTCGCTGTCTATGCATTTGCGAGGACTGTCGCGTGAGCCTTGCC ATGAACAACTTCGGCAGCTGCGTGACTTGTCGCCAGGAAGTCGTAGGCTTCATGCGCTTATGGGTTCCATAA |