Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7008.t1
Gene name
Locationscaffold_20:208093..209534
Strand-
Gene length (bp)1441
Transcript length (bp)1386
Coding sequence length (bp)1386
Protein length (aa) 462

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07798 CCDC90-like Coiled-coil domain-containing protein 90-like 1.3E-42 235 406

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 393 412 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7008.t1
MATPRLPFLYPNFMRAVRSCEPRTYRSIRIPYRLNQRFHTSQQQERASYQRRYGPAVEPNTAHSLRPKKGPHDQE
VPGDPSAGHDGVNASDQGQAPPDESQSEPPPQEAEQNNADVTSSETPTADQRNADQPTEAETKEDKEDKEDNPPT
DREPREEQAKDIDGAEQEQASASSSPASEAPSEESTDTSSSTNQTPFEDVLHMPSPSVFLTPTGEPSSSDDRPPH
LSAAPYVHPFDTYSLVQDLSKGGYSEEQSTTIMKAVRAILQNNLSLARASLTSKSDVENEEYLFKAACSELQSSL
QTARNSEIQHQRSSRTQLQHETDIISQRLSQELSGMKDDIKGMFNDHKMSTREPQRTIDTSVQELNYKITVSLNS
DGKSEIEGLRWILTRRAASTIAICAFMIIVFLKYASVHKAPEPKQAKQAEKPAASKEIATEARAVQDGGIQTVFP
SAEAHLGESLG*
Coding >Pro_DTO377G3_2|g7008.t1
ATGGCCACACCCAGGCTCCCGTTCCTGTATCCGAATTTTATGCGCGCGGTGCGATCATGCGAACCGAGAACATAC
CGTTCAATTAGAATTCCATACCGGCTTAACCAACGCTTCCATACGAGTCAGCAACAGGAGCGTGCTTCCTACCAG
CGGCGATATGGTCCTGCCGTCGAACCGAATACTGCTCATTCGTTGCGTCCGAAGAAGGGTCCACACGATCAGGAG
GTGCCGGGCGATCCATCAGCTGGACATGATGGTGTAAATGCCTCCGACCAGGGGCAAGCTCCACCAGACGAGTCA
CAGTCGGAACCGCCGCCCCAGGAAGCCGAGCAAAACAATGCAGATGTCACTTCTTCGGAAACCCCGACCGCAGAC
CAACGGAACGCAGACCAACCAACCGAAGCTGAAACAAAGGAAGACAAGGAAGACAAGGAAGACAACCCTCCGACG
GACCGGGAACCGCGCGAGGAGCAGGCCAAAGATATAGACGGCGCCGAACAGGAACAGGCTTCGGCCTCTTCGTCC
CCCGCTTCCGAAGCCCCATCGGAAGAAAGTACAGATACCTCTTCATCCACAAACCAAACTCCGTTTGAGGATGTC
CTCCACATGCCCTCGCCGTCGGTGTTTCTAACCCCAACCGGGGAACCCTCCTCGTCCGACGATCGCCCGCCGCAT
TTGTCTGCAGCACCGTATGTTCACCCTTTCGACACATATTCATTGGTACAGGATCTGTCCAAAGGTGGCTACAGC
GAAGAACAGTCTACTACAATCATGAAGGCTGTGCGGGCTATCCTGCAGAACAACCTCTCTTTGGCTAGGGCGAGC
CTTACTTCGAAATCTGATGTCGAAAATGAAGAATACCTGTTCAAAGCAGCCTGCTCCGAGCTTCAGTCATCGCTC
CAGACAGCTCGCAACTCGGAAATACAGCACCAGCGCTCCTCGCGCACGCAATTGCAGCATGAAACGGATATTATC
TCGCAGCGTCTCAGCCAGGAACTTTCAGGCATGAAAGACGACATCAAGGGCATGTTCAATGACCACAAGATGTCC
ACGCGAGAACCGCAGCGGACCATCGACACCTCGGTTCAGGAATTGAACTACAAGATCACCGTGTCGCTTAACAGC
GATGGAAAGAGTGAGATTGAAGGTCTTCGATGGATTTTGACTAGACGCGCTGCTTCGACGATTGCCATCTGTGCT
TTCATGATCATCGTCTTCTTGAAGTATGCTTCCGTGCACAAGGCGCCTGAGCCCAAGCAAGCCAAGCAAGCGGAG
AAGCCGGCTGCCAGCAAAGAAATCGCTACTGAAGCTCGAGCCGTCCAAGATGGTGGCATTCAGACAGTCTTTCCG
TCTGCTGAAGCCCATCTCGGCGAATCACTTGGTTGA
Transcript >Pro_DTO377G3_2|g7008.t1
ATGGCCACACCCAGGCTCCCGTTCCTGTATCCGAATTTTATGCGCGCGGTGCGATCATGCGAACCGAGAACATAC
CGTTCAATTAGAATTCCATACCGGCTTAACCAACGCTTCCATACGAGTCAGCAACAGGAGCGTGCTTCCTACCAG
CGGCGATATGGTCCTGCCGTCGAACCGAATACTGCTCATTCGTTGCGTCCGAAGAAGGGTCCACACGATCAGGAG
GTGCCGGGCGATCCATCAGCTGGACATGATGGTGTAAATGCCTCCGACCAGGGGCAAGCTCCACCAGACGAGTCA
CAGTCGGAACCGCCGCCCCAGGAAGCCGAGCAAAACAATGCAGATGTCACTTCTTCGGAAACCCCGACCGCAGAC
CAACGGAACGCAGACCAACCAACCGAAGCTGAAACAAAGGAAGACAAGGAAGACAAGGAAGACAACCCTCCGACG
GACCGGGAACCGCGCGAGGAGCAGGCCAAAGATATAGACGGCGCCGAACAGGAACAGGCTTCGGCCTCTTCGTCC
CCCGCTTCCGAAGCCCCATCGGAAGAAAGTACAGATACCTCTTCATCCACAAACCAAACTCCGTTTGAGGATGTC
CTCCACATGCCCTCGCCGTCGGTGTTTCTAACCCCAACCGGGGAACCCTCCTCGTCCGACGATCGCCCGCCGCAT
TTGTCTGCAGCACCGTATGTTCACCCTTTCGACACATATTCATTGGTACAGGATCTGTCCAAAGGTGGCTACAGC
GAAGAACAGTCTACTACAATCATGAAGGCTGTGCGGGCTATCCTGCAGAACAACCTCTCTTTGGCTAGGGCGAGC
CTTACTTCGAAATCTGATGTCGAAAATGAAGAATACCTGTTCAAAGCAGCCTGCTCCGAGCTTCAGTCATCGCTC
CAGACAGCTCGCAACTCGGAAATACAGCACCAGCGCTCCTCGCGCACGCAATTGCAGCATGAAACGGATATTATC
TCGCAGCGTCTCAGCCAGGAACTTTCAGGCATGAAAGACGACATCAAGGGCATGTTCAATGACCACAAGATGTCC
ACGCGAGAACCGCAGCGGACCATCGACACCTCGGTTCAGGAATTGAACTACAAGATCACCGTGTCGCTTAACAGC
GATGGAAAGAGTGAGATTGAAGGTCTTCGATGGATTTTGACTAGACGCGCTGCTTCGACGATTGCCATCTGTGCT
TTCATGATCATCGTCTTCTTGAAGTATGCTTCCGTGCACAAGGCGCCTGAGCCCAAGCAAGCCAAGCAAGCGGAG
AAGCCGGCTGCCAGCAAAGAAATCGCTACTGAAGCTCGAGCCGTCCAAGATGGTGGCATTCAGACAGTCTTTCCG
TCTGCTGAAGCCCATCTCGGCGAATCACTTGGTTGA
Gene >Pro_DTO377G3_2|g7008.t1
ATGGCCACACCCAGGCTCCCGTTCCTGTATCCGAATTTTATGCGCGCGGTGCGATCATGCGAACCGAGAACATAC
CGTTCAATTAGAATTCCATACCGGCTTAACCAACGCTTCCATACGAGTCAGCAACAGGAGCGTGCTTCCTACCAG
CGGCGATATGGTCCTGCCGTCGAACCGAATACTGCTCATTCGTTGCGTCCGAAGAAGGGTCCACACGATCAGGAG
GTGCCGGGCGATCCATCAGCTGGACATGATGGTGTAAATGCCTCCGACCAGGGGCAAGCTCCACCAGACGAGTCA
CAGTCGGAACCGCCGCCCCAGGAAGCCGAGCAAAACAATGCAGATGTCACTTCTTCGGAAACCCCGACCGCAGAC
CAACGGAACGCAGACCAACCAACCGAAGCTGAAACAAAGGAAGACAAGGAAGACAAGGAAGACAACCCTCCGACG
GACCGGGAACCGCGCGAGGAGCAGGCCAAAGATATAGACGGCGCCGAACAGGAACAGGCTTCGGCCTCTTCGTCC
CCCGCTTCCGAAGCCCCATCGGAAGAAAGTACAGATACCTCTTCATCCACAAACCAAACTCCGTTTGAGGATGTC
CTCCACATGCCCTCGCCGTCGGTGTTTCTAACCCCAACCGGGGAACCCTCCTCGTCCGACGATCGCCCGCCGCAT
TTGTCTGCAGCACCGTATGTTCACCCTTTCGACACATATTCATTGGTACAGGATCTGTCCAAAGGTGGCTACAGC
GAAGAACAGTCTACTACAATCATGAAGGCTGTGCGGGCTATCCTGCAGAACAACCTCTCTTTGGCTAGGGCGAGC
CTTACTTCGAAATCTGATGTCGAAAATGAAGAATACCTGTTCAAAGCAGCCTGCTCCGAGCTTCAGTCATCGCTC
CAGACAGCTCGCAACTCGGAAATACAGCACCAGCGCTCCTCGCGCACGCAATTGCAGCATGAAACGGATATTATC
TCGCAGCGTCTCAGCCAGGAACTTTCAGGCATGAAAGACGACATCAAGGGCATGTTCAATGACCACAAGATGTCC
ACGCGAGAACCGCAGCGGACCATCGACACCTCGGTTCAGGAATTGAACTACAAGATCACCGTGTCGCTTAACAGC
GATGGAAAGAGTGAGATTGAAGGTCTTCGATGGATTTTGACTAGACGCGCTGCTTCGACGATTGCCATCTGTGCT
TGTAAGTGCCCCATTGTTCCTATTTGGCTCTTTCGTGTAGCTAACTCGATTATAAGTCATGATCATCGTCTTCTT
GAAGTATGCTTCCGTGCACAAGGCGCCTGAGCCCAAGCAAGCCAAGCAAGCGGAGAAGCCGGCTGCCAGCAAAGA
AATCGCTACTGAAGCTCGAGCCGTCCAAGATGGTGGCATTCAGACAGTCTTTCCGTCTGCTGAAGCCCATCTCGG
CGAATCACTTGGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail