Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g6996.t1
Gene name
Location	scaffold_20:181647..182522
Strand	-
Gene length (bp)	875
Transcript length (bp)	648
Coding sequence length (bp)	648
Protein length (aa)	216

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13774	Longin	Regulated-SNARE-like domain	4.2E-26	35	117
PF00957	Synaptobrevin	Synaptobrevin	5.8E-14	132	211

GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	191	213	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g6996.t1 MVRSTQIARLDGLMLAASVDDEQAESELSEIKSQAKMIFRRLNRNSAPQASIESGQYSLHYTIQDDICFLCICDK SYPRKLAFTYLADLASEFTTTYTSSQYLSPNLRPYAFVEFDTFIQRTKKLYQDSRASQNLDKLNDELRDVTKVMT KNIEDLLYRGDSLERMGELSGRLREDSKKYRKAAVRINWELLLKQYGPFAGVGLVICILLFWRFF*
Coding	>Pro_DTO377G3_2\|g6996.t1 ATGGTGAGGTCAACGCAGATTGCAAGGCTCGACGGCCTTATGCTGGCAGCCTCGGTCGACGACGAGCAGGCTGAA TCGGAGCTCTCTGAGATTAAGAGTCAGGCTAAAATGATATTTCGGCGATTGAACCGCAACTCCGCACCCCAAGCC AGTATTGAGTCTGGCCAATACAGTCTACACTACACAATTCAGGACGATATATGCTTTCTATGCATTTGCGACAAG TCCTACCCCCGCAAACTCGCATTTACCTATCTCGCTGATCTGGCCTCCGAATTCACGACTACCTATACCTCCTCA CAGTACCTCTCACCAAACCTCCGTCCCTATGCCTTTGTCGAGTTTGATACCTTTATCCAGCGCACAAAGAAATTG TACCAAGACAGTCGCGCGTCTCAGAATCTTGACAAGCTGAACGATGAGCTCCGTGATGTCACCAAGGTGATGACA AAGAACATCGAGGACCTCTTGTATCGAGGCGATAGTTTGGAGCGGATGGGTGAACTGTCGGGGCGACTCCGCGAG GATAGCAAAAAATACAGAAAGGCGGCTGTACGCATCAACTGGGAATTGTTGCTGAAGCAGTATGGACCTTTCGCT GGCGTCGGGCTTGTCATTTGCATCCTTCTTTTCTGGCGATTCTTCTGA
Transcript	>Pro_DTO377G3_2\|g6996.t1 ATGGTGAGGTCAACGCAGATTGCAAGGCTCGACGGCCTTATGCTGGCAGCCTCGGTCGACGACGAGCAGGCTGAA TCGGAGCTCTCTGAGATTAAGAGTCAGGCTAAAATGATATTTCGGCGATTGAACCGCAACTCCGCACCCCAAGCC AGTATTGAGTCTGGCCAATACAGTCTACACTACACAATTCAGGACGATATATGCTTTCTATGCATTTGCGACAAG TCCTACCCCCGCAAACTCGCATTTACCTATCTCGCTGATCTGGCCTCCGAATTCACGACTACCTATACCTCCTCA CAGTACCTCTCACCAAACCTCCGTCCCTATGCCTTTGTCGAGTTTGATACCTTTATCCAGCGCACAAAGAAATTG TACCAAGACAGTCGCGCGTCTCAGAATCTTGACAAGCTGAACGATGAGCTCCGTGATGTCACCAAGGTGATGACA AAGAACATCGAGGACCTCTTGTATCGAGGCGATAGTTTGGAGCGGATGGGTGAACTGTCGGGGCGACTCCGCGAG GATAGCAAAAAATACAGAAAGGCGGCTGTACGCATCAACTGGGAATTGTTGCTGAAGCAGTATGGACCTTTCGCT GGCGTCGGGCTTGTCATTTGCATCCTTCTTTTCTGGCGATTCTTCTGA
Gene	>Pro_DTO377G3_2\|g6996.t1 ATGGTGAGGTCAACGCAGATTGCAAGGCTCGACGGTGAGGAACTCTCTGCGAGGTTGGGAGGATGCGTAGTGCTG ATGTCAAAGTGAAACAGGCCTTATGCTGGCAGCCTCGGTCGACGACGAGCAGGTACGTGACAACGATTATTTAAG CTGATCTGGAGCTTACAATATCCGTAGGCTGAATCGGAGCTCTCTGAGATTAAGAGTCAGGCTAAAATGATATTT CGGCGATTGAACCGCAACTCCGCACCCCAAGCCAGTATTGAGTCTGGCCAATACAGTCTACAGTAAGTCTCAGCC AGCAATCAACAAACATTGCCAATGGACAATCTCTCACATGCCTTTCAGCTACACAATTCAGGACGATATATGCTT TCTATGCATTTGCGACAAGTCCTACCCCCGCAAACTCGCATTTACCTATCTCGCTGATCTGGCCTCCGAATTCAC GACTACCTATACCTCCTCACAGTACCTCTCACCAAACCTCCGTCCCTATGCCTTTGTCGAGTTTGATACCTTTAT CCAGCGCACAAAGAAATTGTACCAAGACAGTCGCGCGTCTCAGAATCTTGACAAGCTGAACGATGAGCTCCGTGA TGTCACCAAGGTGATGACAAAGAACATCGAGGACCTCTTGTATCGAGGCGATAGTTTGGAGCGGATGGGTGAACT GTCGGGGCGACTCCGCGAGGATAGCAAAAAATACAGAAAGGCGGCTGTACGCATCAACTGGGAATTGTTGCTGAA GCAGGTGGGTCTATACTTTGCGTCAGATTTCCCCTGAACGATCTTGGCTAACCATCTCACAGTATGGACCTTTCG CTGGCGTCGGGCTTGTCATTTGCATCCTTCTTTTCTGGCGATTCTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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