Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6980.t1
Gene name
Locationscaffold_20:140968..141730
Strand-
Gene length (bp)762
Transcript length (bp)705
Coding sequence length (bp)705
Protein length (aa) 235

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 3.3E-27 17 170
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 7.2E-14 172 232
PF00106 adh_short short chain dehydrogenase 1.7E-30 8 173
PF08659 KR KR domain 6.3E-06 11 113

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6980.t1
MAPRLLNKICLITGTGGSMGRAAALKFAEEGAKIVGCDINTVTDAATIKAVRELGGEMISMSPCDLTKRENCEQF
VNLAIKTYGRIDVLYNNAAMVYMSWLDDGKDDDWYKTVDQELSLVYLLTRVAWPYLKESGASIINVGSANGWIAI
RGVPAIAHTATKGGVIAMTRLIQTLQTAPLLEDPQWRSDLTQKIMIGRIGQPEEIAAVASFLASDESSYITAADI
RVDGGMTAW*
Coding >Pro_DTO377G3_2|g6980.t1
ATGGCACCGCGTCTGTTGAACAAGATATGTCTTATCACCGGTACAGGCGGTAGTATGGGACGTGCAGCAGCCCTC
AAGTTTGCCGAAGAAGGCGCCAAAATCGTCGGCTGTGACATCAACACTGTGACCGACGCAGCAACCATCAAAGCT
GTACGAGAGCTAGGTGGTGAAATGATATCCATGTCCCCATGCGATCTCACAAAACGTGAGAACTGCGAGCAATTT
GTCAACCTAGCCATAAAAACATATGGACGCATCGATGTGCTGTACAATAATGCAGCAATGGTCTACATGAGCTGG
CTCGATGACGGCAAGGATGACGACTGGTACAAAACAGTTGACCAGGAGTTAAGCCTTGTCTACCTGTTGACTCGT
GTTGCATGGCCATATCTGAAGGAGTCAGGTGCATCTATCATCAACGTTGGCTCTGCCAACGGCTGGATTGCAATT
CGTGGAGTGCCGGCTATCGCCCACACAGCTACGAAAGGTGGTGTTATTGCCATGACACGCCTTATCCAGACTCTG
CAAACTGCACCTTTGCTTGAGGACCCGCAATGGAGATCGGATTTAACGCAGAAGATCATGATTGGCCGTATCGGG
CAGCCAGAGGAGATCGCGGCTGTGGCTAGCTTTCTTGCTTCGGATGAGAGCTCCTATATAACCGCTGCAGATATT
CGGGTCGATGGTGGTATGACAGCCTGGTAG
Transcript >Pro_DTO377G3_2|g6980.t1
ATGGCACCGCGTCTGTTGAACAAGATATGTCTTATCACCGGTACAGGCGGTAGTATGGGACGTGCAGCAGCCCTC
AAGTTTGCCGAAGAAGGCGCCAAAATCGTCGGCTGTGACATCAACACTGTGACCGACGCAGCAACCATCAAAGCT
GTACGAGAGCTAGGTGGTGAAATGATATCCATGTCCCCATGCGATCTCACAAAACGTGAGAACTGCGAGCAATTT
GTCAACCTAGCCATAAAAACATATGGACGCATCGATGTGCTGTACAATAATGCAGCAATGGTCTACATGAGCTGG
CTCGATGACGGCAAGGATGACGACTGGTACAAAACAGTTGACCAGGAGTTAAGCCTTGTCTACCTGTTGACTCGT
GTTGCATGGCCATATCTGAAGGAGTCAGGTGCATCTATCATCAACGTTGGCTCTGCCAACGGCTGGATTGCAATT
CGTGGAGTGCCGGCTATCGCCCACACAGCTACGAAAGGTGGTGTTATTGCCATGACACGCCTTATCCAGACTCTG
CAAACTGCACCTTTGCTTGAGGACCCGCAATGGAGATCGGATTTAACGCAGAAGATCATGATTGGCCGTATCGGG
CAGCCAGAGGAGATCGCGGCTGTGGCTAGCTTTCTTGCTTCGGATGAGAGCTCCTATATAACCGCTGCAGATATT
CGGGTCGATGGTGGTATGACAGCCTGGTAG
Gene >Pro_DTO377G3_2|g6980.t1
ATGGCACCGCGTCTGTTGAACAAGATATGTCTTATCACCGGTACAGGCGGTAGTATGGGACGTGCAGCAGCCCTC
AAGTTTGCCGAAGAAGGCGCCAAAATCGTCGGCTGTGACATCAACACTGTGACCGACGCAGCAACCATCAAAGCT
GTACGAGAGCTAGGTGGTGAAATGATATCCATGTCCCCATGCGATCTCACAAAACGTGAGAACTGCGAGCAATTT
GTCAACCTAGCCATAAAAACATATGGACGCATCGATGTGCTGTACAATAATGCAGCAATGGTCTACATGAGCTGG
CTCGATGACGGCAAGGATGACGACTGGTACAAAACAGTTGACCAGGAGTTAAGCCTTGTCTACCTGTTGACTCGT
GTTGCATGGCCATATCTGAAGGAGTCAGGTGCATCTATCATCAACGTTGGCTCTGCCAACGGCTGGATTGCAATT
CGTGGAGTGCCGGCTATCGCCCACACAGCTACGAAAGGTGGTGTTATTGCCATGACACGTTAGTTCGCCATGGAA
GGGCGTGAGCATGGTATCCGGGCCAATTCAATCTCACCAGGCCTTATCCAGACTCTGCAAACTGCACCTTTGCTT
GAGGACCCGCAATGGAGATCGGATTTAACGCAGAAGATCATGATTGGCCGTATCGGGCAGCCAGAGGAGATCGCG
GCTGTGGCTAGCTTTCTTGCTTCGGATGAGAGCTCCTATATAACCGCTGCAGATATTCGGGTCGATGGTGGTATG
ACAGCCTGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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