Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6976.t1
Gene name
Locationscaffold_20:131652..132585
Strand-
Gene length (bp)933
Transcript length (bp)822
Coding sequence length (bp)822
Protein length (aa) 274

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 4.9E-63 13 268
PF00106 adh_short short chain dehydrogenase 2.7E-46 7 217
PF08659 KR KR domain 2.6E-11 5 132
PF01370 Epimerase NAD dependent epimerase/dehydratase family 2.5E-05 7 203

GO

GO Term Description Terminal node
GO:0050662 coenzyme binding Yes
GO:0003824 catalytic activity Yes
GO:0005488 binding No
GO:0048037 cofactor binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 36 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6976.t1
MSINGFALVTGSGSGIGRACALAFASEGAAGVVFADLNRESAEKAAEESKKLATHPAYRALVLTLDVTNEEQVES
VVAETKQAFGRIDYMVNSAGIGVQVAAEIAEASLPEFNRFLDVNVKGTFLLTKVMSRAMKEQQLKPVSSKNPDRG
STRGVILNMASCSSFVATPLLTQYTTSKHAVLGLTRNAALDNAQYNIRVNCLCPSWVDTPMVDRAVQGNPELKAL
IAKAVPMGRIAHVDEITDLILFLCSPKASYVTGSSWIVDGGTTLTSHA*
Coding >Pro_DTO377G3_2|g6976.t1
ATGAGCATCAACGGATTTGCTCTCGTTACTGGTTCAGGGAGCGGGATTGGCCGGGCCTGCGCGTTGGCCTTTGCT
TCTGAAGGAGCTGCTGGCGTTGTCTTTGCCGATTTGAACCGAGAGAGCGCTGAGAAGGCAGCCGAAGAAAGCAAG
AAATTGGCAACACACCCTGCATATCGAGCACTCGTATTGACCCTCGACGTGACCAATGAGGAGCAGGTGGAATCC
GTGGTAGCAGAGACGAAGCAGGCGTTTGGAAGAATTGATTACATGGTGAATTCGGCTGGAATTGGTGTCCAAGTC
GCAGCGGAGATTGCCGAAGCATCCCTGCCGGAATTTAACCGCTTCCTCGACGTGAACGTCAAAGGGACTTTCCTT
CTCACCAAGGTTATGTCTCGCGCCATGAAAGAGCAACAGCTGAAGCCCGTGAGCTCGAAAAATCCCGATCGGGGT
TCTACGCGGGGTGTTATTCTCAATATGGCGTCTTGTTCATCGTTCGTGGCGACGCCTTTATTGACGCAGTATACC
ACGTCTAAACATGCCGTTCTTGGTTTGACTCGAAACGCCGCATTGGATAATGCGCAATACAATATCCGTGTCAAC
TGCCTGTGCCCCTCGTGGGTTGATACGCCTATGGTGGACCGCGCCGTGCAAGGGAATCCGGAATTGAAGGCGCTG
ATTGCAAAGGCCGTGCCAATGGGAAGGATTGCACATGTGGACGAGATAACTGATTTGATCTTGTTCCTATGTAGC
CCCAAAGCGAGTTATGTCACTGGTAGTAGCTGGATTGTTGATGGGGGAACTACTCTGACAAGTCATGCTTAA
Transcript >Pro_DTO377G3_2|g6976.t1
ATGAGCATCAACGGATTTGCTCTCGTTACTGGTTCAGGGAGCGGGATTGGCCGGGCCTGCGCGTTGGCCTTTGCT
TCTGAAGGAGCTGCTGGCGTTGTCTTTGCCGATTTGAACCGAGAGAGCGCTGAGAAGGCAGCCGAAGAAAGCAAG
AAATTGGCAACACACCCTGCATATCGAGCACTCGTATTGACCCTCGACGTGACCAATGAGGAGCAGGTGGAATCC
GTGGTAGCAGAGACGAAGCAGGCGTTTGGAAGAATTGATTACATGGTGAATTCGGCTGGAATTGGTGTCCAAGTC
GCAGCGGAGATTGCCGAAGCATCCCTGCCGGAATTTAACCGCTTCCTCGACGTGAACGTCAAAGGGACTTTCCTT
CTCACCAAGGTTATGTCTCGCGCCATGAAAGAGCAACAGCTGAAGCCCGTGAGCTCGAAAAATCCCGATCGGGGT
TCTACGCGGGGTGTTATTCTCAATATGGCGTCTTGTTCATCGTTCGTGGCGACGCCTTTATTGACGCAGTATACC
ACGTCTAAACATGCCGTTCTTGGTTTGACTCGAAACGCCGCATTGGATAATGCGCAATACAATATCCGTGTCAAC
TGCCTGTGCCCCTCGTGGGTTGATACGCCTATGGTGGACCGCGCCGTGCAAGGGAATCCGGAATTGAAGGCGCTG
ATTGCAAAGGCCGTGCCAATGGGAAGGATTGCACATGTGGACGAGATAACTGATTTGATCTTGTTCCTATGTAGC
CCCAAAGCGAGTTATGTCACTGGTAGTAGCTGGATTGTTGATGGGGGAACTACTCTGACAAGTCATGCTTAA
Gene >Pro_DTO377G3_2|g6976.t1
ATGAGCATCAACGGATTTGCTCTCGTTACTGGTTCAGGGAGCGGGATTGGCCGGGCCTGCGCGTTGGCCTTTGCT
TCTGAAGGAGCTGCTGGCGTTGTCTTTGCCGATTTGAACCGAGAGAGCGCTGAGAAGGCAGCCGAAGAAAGCAAG
AAATTGGCAACACACCCTGCATATCGAGCACTCGTATTGACCCTCGACGTGACCAATGAGGAGCAGGTGGAATCC
GTGGTAGCAGAGACGAAGCAGGCGTTTGGAAGAATTGATTACATGGTGAATTCGGCTGGAGTATGAGCTTTCTCT
CCATCTTCTTGCTACTTGATTTTCTGATGCCTCTATGTAGATTGGTGTCCAAGTCGCAGCGGAGATTGCCGAAGC
ATCCCTGCCGGAATTTAACCGCTTCCTCGACGTGAACGTCAAAGGGACTTTCCTTCTCACCAAGGTTATGTCTCG
CGCCATGAAAGAGCAACAGCTGAAGCCCGTGAGCTCGAAAAATCCCGATCGGGGTTCTACGCGGGGTGTTATTCT
CAATATGGCGTCTTGTTCATCGTTCGTGGCGACGCCTTTATTGACGCAGTATACCACGTCTAAACATGCCGTTCT
TGGTTTGACTCGAAACGCCGGTACGTCTGACATGATTTAAATGGACAGAAAGAGAAAAGTCCTAACAAAAGAAAA
GCATTGGATAATGCGCAATACAATATCCGTGTCAACTGCCTGTGCCCCTCGTGGGTTGATACGCCTATGGTGGAC
CGCGCCGTGCAAGGGAATCCGGAATTGAAGGCGCTGATTGCAAAGGCCGTGCCAATGGGAAGGATTGCACATGTG
GACGAGATAACTGATTTGATCTTGTTCCTATGTAGCCCCAAAGCGAGTTATGTCACTGGTAGTAGCTGGATTGTT
GATGGGGGAACTACTCTGACAAGTCATGCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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