Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6972.t1
Gene name
Locationscaffold_20:124038..124868
Strand+
Gene length (bp)830
Transcript length (bp)516
Coding sequence length (bp)516
Protein length (aa) 172

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11578 DUF3237 Protein of unknown function (DUF3237) 5.5E-30 8 164

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6972.t1
MSQTSGFPSLRPAYILKLQVGEGQPVGATSSGSTFVHYSTPGGSISTVEGFSPSIDAEVVFAGDWLYFDPDQQHS
RMNVKGVARTTEGEGINFAYSGVSGVSPDLGAIFQGQPKTIPFGLSTMNPTFEVGHPRLKDLENNTWVGNGRFSL
EGDKLYVEVRISQVVSSKDMD*
Coding >Pro_DTO377G3_2|g6972.t1
ATGTCTCAAACTTCCGGGTTTCCCAGTCTTCGCCCCGCCTATATTCTCAAGCTGCAAGTAGGAGAGGGCCAGCCT
GTTGGCGCAACATCTTCAGGGTCGACCTTTGTCCACTATAGCACCCCAGGCGGAAGCATCTCCACTGTAGAGGGA
TTTTCACCTAGCATCGATGCCGAGGTTGTATTTGCTGGCGACTGGTTGTATTTCGATCCCGATCAGCAACATAGT
CGGATGAATGTCAAGGGTGTTGCAAGAACCACTGAAGGCGAAGGCATCAACTTCGCCTATTCGGGCGTTTCCGGA
GTTTCGCCCGACTTGGGAGCCATTTTCCAAGGACAACCGAAGACTATTCCATTCGGATTATCTACCATGAATCCC
ACTTTTGAGGTTGGTCATCCCCGTCTCAAGGACCTCGAGAACAACACTTGGGTTGGCAATGGCCGATTTTCGTTG
GAGGGAGACAAGTTATACGTGGAGGTCCGCATCTCGCAGGTTGTTTCCAGCAAGGATATGGATTAG
Transcript >Pro_DTO377G3_2|g6972.t1
ATGTCTCAAACTTCCGGGTTTCCCAGTCTTCGCCCCGCCTATATTCTCAAGCTGCAAGTAGGAGAGGGCCAGCCT
GTTGGCGCAACATCTTCAGGGTCGACCTTTGTCCACTATAGCACCCCAGGCGGAAGCATCTCCACTGTAGAGGGA
TTTTCACCTAGCATCGATGCCGAGGTTGTATTTGCTGGCGACTGGTTGTATTTCGATCCCGATCAGCAACATAGT
CGGATGAATGTCAAGGGTGTTGCAAGAACCACTGAAGGCGAAGGCATCAACTTCGCCTATTCGGGCGTTTCCGGA
GTTTCGCCCGACTTGGGAGCCATTTTCCAAGGACAACCGAAGACTATTCCATTCGGATTATCTACCATGAATCCC
ACTTTTGAGGTTGGTCATCCCCGTCTCAAGGACCTCGAGAACAACACTTGGGTTGGCAATGGCCGATTTTCGTTG
GAGGGAGACAAGTTATACGTGGAGGTCCGCATCTCGCAGGTTGTTTCCAGCAAGGATATGGATTAG
Gene >Pro_DTO377G3_2|g6972.t1
ATGTCTCAAACTTCCGGGTTTCCCAGTCTTCGCCCCGCCTATATTCTCAAGGTGTGTTATCAAATGCAAAAGCAT
CTCACTTGACTAACAAAGACATAGCTGCAAGTAGGAGAGGGCCAGCCTGTTGGTATGAAGATACTATTGTGTACA
TTACATCGCCTCGGTCTAATCATTTTCTGTAGGCGCAACATCTTCAGGGTCGACCTTTGTCCACTATGTGAGTTT
CCAGTCTCAATCTACCAGATGAACTGATTCCTAACTTTTGTTCAGAGCACCCCAGGCGGAAGCATCTCCACTGTA
GAGGGATTTTCACCTAGCATCGATGCCGAGGTTGTATTTGCTGGCGACTGGTTGTATTTCGATCCCGATCAGCAA
CATAGTCGGATGAATGTCAAGGGTGTTGCAAGGTGGGTTTATATCTCACGTGCTTAATTATATGAATCCCACTGA
CAAATCAATCAGAACCACTGAAGGCGAAGTGAGTACCGTCAATATCAGCAAGAAAACATAGAACTAATGAAGTGG
CAGGGCATCAACTTCGCCTATTCGGGCGTTTCCGGAGTTTCGCCCGACTTGGGAGCCATTTTCCAAGGACAACCG
AAGACTATTCCATTCGGATTATCTAGTTAGTTCTTTGACATAAATCTGTATGATATAATACGCTAACACATTTTC
TAGCCATGAATCCCACTTTTGAGGTTGGTCATCCCCGTCTCAAGGACCTCGAGAACAACACTTGGGTTGGCAATG
GCCGATTTTCGTTGGAGGGAGACAAGTTATACGTGGAGGTCCGCATCTCGCAGGTTGTTTCCAGCAAGGATATGG
ATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail