Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6971.t1
Gene name
Locationscaffold_20:122159..123524
Strand+
Gene length (bp)1365
Transcript length (bp)843
Coding sequence length (bp)843
Protein length (aa) 281

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 4.0E-38 2 185
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 2.8E-30 12 184

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6971.t1
MKSVLITGCGKGGIGEALALQYRARGCTVLATVLPWESREHLSSVGIACFELDVTKDDSVRALRKAVEEKIGDRL
DILVNNAGICYTMTAIDTDVKQVQQMFDVNLFGPIRMVNIFHPLLILAKGCVVNIGSVGGVVPYMYGSSYNASKA
ALHHWGNTLRVEMSPLGVRVINIISGNIGTNILDRDSSRTLPPDSFYAPLQTEFQAHVQRVPDTTDRMVYAKSVV
QQSLRACPPAWHWVGNTSTLVWFMDIFAFRTIWDYVLWPVFSLGKLKRAMKSRSI*
Coding >Pro_DTO377G3_2|g6971.t1
ATGAAGTCCGTTTTAATTACAGGTTGTGGAAAGGGAGGCATCGGCGAGGCCTTGGCTCTTCAGTATCGCGCTCGA
GGTTGCACTGTTCTGGCCACTGTTCTGCCCTGGGAATCTAGAGAGCATCTTTCTTCCGTTGGCATCGCTTGTTTT
GAGTTAGATGTGACGAAAGATGACTCCGTCCGAGCCTTGCGCAAAGCAGTCGAGGAGAAGATTGGAGATCGACTC
GATATTCTAGTGAACAATGCTGGGATCTGCTATACAATGACCGCCATCGACACCGATGTTAAACAAGTGCAACAG
ATGTTTGACGTCAATCTCTTCGGACCAATTCGAATGGTAAATATCTTCCACCCCTTGCTAATTCTAGCCAAAGGG
TGTGTCGTCAATATTGGCTCTGTCGGAGGGGTTGTACCCTACATGTATGGCTCTTCATACAACGCTAGTAAAGCT
GCACTACATCACTGGGGAAATACACTCCGAGTGGAGATGAGCCCATTGGGCGTCCGAGTCATCAATATTATATCT
GGCAATATTGGCACCAATATCCTTGACCGTGATTCATCGCGTACTCTCCCTCCAGACTCATTCTACGCTCCTCTG
CAAACGGAGTTCCAAGCGCATGTCCAACGAGTACCCGATACAACCGATCGCATGGTGTATGCCAAATCGGTGGTG
CAGCAGTCACTAAGAGCATGTCCACCAGCCTGGCACTGGGTAGGCAATACCTCGACCCTTGTGTGGTTTATGGAT
ATCTTCGCGTTTCGCACTATCTGGGACTACGTGCTATGGCCTGTCTTTAGTCTGGGGAAATTAAAGCGCGCGATG
AAATCCAGGTCTATCTAG
Transcript >Pro_DTO377G3_2|g6971.t1
ATGAAGTCCGTTTTAATTACAGGTTGTGGAAAGGGAGGCATCGGCGAGGCCTTGGCTCTTCAGTATCGCGCTCGA
GGTTGCACTGTTCTGGCCACTGTTCTGCCCTGGGAATCTAGAGAGCATCTTTCTTCCGTTGGCATCGCTTGTTTT
GAGTTAGATGTGACGAAAGATGACTCCGTCCGAGCCTTGCGCAAAGCAGTCGAGGAGAAGATTGGAGATCGACTC
GATATTCTAGTGAACAATGCTGGGATCTGCTATACAATGACCGCCATCGACACCGATGTTAAACAAGTGCAACAG
ATGTTTGACGTCAATCTCTTCGGACCAATTCGAATGGTAAATATCTTCCACCCCTTGCTAATTCTAGCCAAAGGG
TGTGTCGTCAATATTGGCTCTGTCGGAGGGGTTGTACCCTACATGTATGGCTCTTCATACAACGCTAGTAAAGCT
GCACTACATCACTGGGGAAATACACTCCGAGTGGAGATGAGCCCATTGGGCGTCCGAGTCATCAATATTATATCT
GGCAATATTGGCACCAATATCCTTGACCGTGATTCATCGCGTACTCTCCCTCCAGACTCATTCTACGCTCCTCTG
CAAACGGAGTTCCAAGCGCATGTCCAACGAGTACCCGATACAACCGATCGCATGGTGTATGCCAAATCGGTGGTG
CAGCAGTCACTAAGAGCATGTCCACCAGCCTGGCACTGGGTAGGCAATACCTCGACCCTTGTGTGGTTTATGGAT
ATCTTCGCGTTTCGCACTATCTGGGACTACGTGCTATGGCCTGTCTTTAGTCTGGGGAAATTAAAGCGCGCGATG
AAATCCAGGTCTATCTAG
Gene >Pro_DTO377G3_2|g6971.t1
ATGAAGTCCGTTTTAATTACAGGGTCAGTTTTGTTTTGTTTGTTGGATCTCCCAATATTGACGAACGATTCAGTT
GTGGAAAGGGAGGCATCGGCGAGGCCTTGGCTCTTCAGTATCGCGCTCGAGGTACAACTCCCATTCATTATTCAT
GTGCAACTCATTAAACCAATCAGGTTGCACTGTTCTGGCCACTGTTCTGCCCTGGGAATCTAGAGAGCATCTTTC
TTCCGTTGGCATCGCTTGTTTTGAGTTAGATGTGACGAAAGATGACTCCGTCCGAGCCTTGCGCAAAGCAGTCGA
GGAGAAGATTGGAGATCGACTCGATATTCTAGTGAACAATGCGTAAGTCTTCGTGACAATCAATCTTCGATTTGG
TTTGTTTCAATTTAACAATATATAGTGGGATCTGTAAGCTTCTGTTGATGCAGTACAGGATGAAATAATACTAAG
AAGCAGGCTATACAATGACCGCCATCGACACCGATGTTAAACAAGTGCAACAGATGTTTGACGTCAATCTCTTCG
GACCAATTCGAATGGTAAATATCTTCCACCCCTTGCTAATTCTAGCCAAAGGGTGTGTCGTCAATATTGGCTCTG
TCGGAGGGGTTGTACCCTACATGTATGGCTGTATGTCTATCTGAAATATGGGTTCGGCTGAAATCCACAACTGAC
TGCAATGTAGCTTCATACAACGCTAGTAAAGCTGCACTACATCACTGGGGAAATACACTCCGAGTGGAGATGAGC
CCATTGGGGTCTGTCAATTATCCACCTCTCTACCTTTTCGCTCGCTAATCGTTCGAACAGCGTCCGAGTCATCAA
TGTAATATCTCAAGTCAGTATAATATATGAGTTTGGAGACTAACAACGCATCTAGATTATATCTGGCAATATTGG
CACCAATATCCTTGACCGTGATTCATCGCGTACTCTCCCTCCAGGTACGTCGGCAACCCCTGCAGTTTGGCTCCC
AAATTGTCAACTAATGAAATATGTAGACTCATTCTACGCTCCTCTGCAAACGGAGTTCCAAGCGCATGTCCAACG
AGTACCCGGTAAGCTGAAATATTGAATATTGTTCGTGCAAAGTAGGCTGATCAACAGATACAACCGATCGCATGG
TGTATGCCAAATCGGTGGTGCAGCAGTCACTAAGAGCATGTCCACCAGCCTGGCACTGGGTAGGCAATACCTCGA
CCCTTGTGTGGTTTATGGATATCTTCGCGTTTCGCACTATCTGGGTAGGTTTTTACTCTTCGATTTTGGACACAT
GGCATCCACTAATAATAACAGGACTACGTGCTATGGCCTGTCTTTAGTCTGGGGAAATTAAAGCGCGCGATGAAA
TCCAGGTCTATCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail