© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g6967.t1 |
| Gene name | |
| Location | scaffold_20:107157..108890 |
| Strand | + |
| Gene length (bp) | 1733 |
| Transcript length (bp) | 1671 |
| Coding sequence length (bp) | 1671 |
| Protein length (aa) | 557 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 5.6E-85 | 79 | 519 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.9E-27 | 81 | 444 |
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 1.2E-06 | 103 | 264 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 38 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 70 | 92 | 22 |
| 2 | 112 | 129 | 17 |
| 3 | 141 | 160 | 19 |
| 4 | 165 | 187 | 22 |
| 5 | 200 | 222 | 22 |
| 6 | 227 | 249 | 22 |
| 7 | 318 | 340 | 22 |
| 8 | 355 | 377 | 22 |
| 9 | 384 | 406 | 22 |
| 10 | 418 | 440 | 22 |
| 11 | 482 | 504 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| 3d_25C | Three days - 25 degrees Celsius | 0.53 | 0.00 | 1.09 |
| 5d_25C | Five days - 25 degrees Celsius | 0.52 | 0.00 | 1.08 |
| 7d_25C | Seven days - 25 degrees Celsius | 0.65 | 0.00 | 1.37 |
| 10d_25C | Ten days - 25 degrees Celsius | 0.75 | 0.00 | 1.54 |
| 7d_15C | Seven days - 15 degrees Celsius | 0.58 | 0.00 | 1.24 |
| 7d_30C | Seven days - 30 degrees Celsius | 3.26 | 0.75 | 5.76 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| 3d_25C | 5d_25C | 1.000000 | no |
| 3d_25C | 7d_25C | 1.000000 | no |
| 3d_25C | 7d_15C | 1.000000 | no |
| 3d_25C | 7d_30C | 0.001804 | yes |
| 3d_25C | 10d_25C | 0.642914 | no |
| 5d_25C | 7d_25C | 1.000000 | no |
| 5d_25C | 7d_15C | 1.000000 | no |
| 5d_25C | 7d_30C | 0.000700 | yes |
| 5d_25C | 10d_25C | 0.630390 | no |
| 7d_25C | 7d_15C | 1.000000 | no |
| 7d_25C | 7d_30C | 0.004045 | yes |
| 7d_25C | 10d_25C | 0.881839 | no |
| 7d_15C | 7d_30C | 0.005235 | yes |
| 7d_15C | 10d_25C | 0.775613 | no |
| 7d_30C | 10d_25C | 0.007091 | yes |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g6967.t1 MADLKDVEAPQNTHSEDKDAVAFEMDDVADQKLQNGLSEAAMDAELQQLEEQVHIIPKSRLDITMSNPAAFTYVL VAFASMGGMLSGLDQSLISGANLYLPVDLGLSAADNSLVNAGMPLGAVAGALLLSPANEYLGRRMAIIVSCILYT IGAALEAGAINFGMVFAGRFILGAGVGLEGGTVPVYVAECVPRRLRGNLVSLYQLNIALGEVLGYAVAAMFVSVE GNWRYILGSSLVFSTILFVGMLFLPESPRFLMHKGREVEAYAVWKKIRGFNDLEAKDEFLGMRQAVTAESEEQAQ SKNYPWMDFFTVPRARRAMVYANIMIFLGQFTGVNAVMYYMSTLMQAIGFGDKDAVFMSLVGGGALLIGTIPAVL YMERFGRRYWANVMLPGFFIGLLLVGVGYTIDADKYPAAAQGIYFTGIVLYMGFFGSYACLTWVVPSEVFPTYLR SYGMTTADANLFLCSFIVTYNFTRMMESMQRIGLTLGFYGGIAILGWAYQIIFMPETKNKTLEEIEEIFSLPTAV IVKRNLKQTAQVIRDLSRFRLKKVFSPEPYN* |
| Coding | >Pro_DTO377G3_2|g6967.t1 ATGGCCGACCTCAAAGATGTCGAGGCACCTCAGAACACGCACAGCGAAGACAAGGACGCCGTCGCCTTTGAGATG GACGATGTGGCGGACCAAAAGCTCCAAAACGGGCTGAGCGAAGCCGCCATGGATGCGGAACTGCAGCAGCTGGAA GAGCAGGTGCACATTATCCCCAAATCCCGCCTCGATATAACCATGTCCAATCCTGCTGCCTTTACCTACGTCCTC GTCGCCTTCGCGTCCATGGGAGGTATGCTGTCTGGTCTTGACCAGTCGCTTATCAGTGGCGCAAACCTCTACCTC CCCGTTGATCTAGGTCTGTCTGCAGCAGATAACAGTCTAGTCAACGCGGGCATGCCACTCGGAGCCGTTGCCGGT GCTCTTCTCCTTTCTCCAGCAAACGAGTACCTCGGTCGTCGTATGGCTATCATTGTCTCCTGTATTCTGTACACA ATCGGTGCCGCCCTGGAGGCTGGTGCTATAAACTTCGGAATGGTGTTCGCAGGCCGATTCATTCTTGGCGCTGGT GTCGGTTTGGAGGGTGGTACTGTCCCAGTCTATGTCGCAGAGTGTGTCCCCCGCAGACTCCGCGGTAACCTCGTA TCCTTGTACCAACTAAACATCGCCCTGGGTGAAGTCCTCGGCTACGCCGTCGCTGCAATGTTCGTTAGCGTCGAA GGAAACTGGCGTTACATCCTAGGCTCCTCGCTGGTCTTCTCAACAATCCTTTTCGTGGGTATGCTCTTCCTGCCA GAGAGTCCCCGATTCCTAATGCACAAGGGACGCGAGGTCGAAGCGTACGCAGTATGGAAGAAGATCCGTGGATTC AACGACCTCGAAGCCAAAGACGAGTTCCTCGGAATGCGACAAGCCGTCACAGCCGAAAGCGAGGAACAAGCCCAG TCGAAGAACTACCCCTGGATGGACTTCTTTACTGTACCTCGCGCACGCCGCGCCATGGTCTACGCCAATATCATG ATCTTCCTAGGACAGTTCACAGGCGTCAACGCAGTGATGTACTACATGTCGACGCTGATGCAGGCCATCGGCTTC GGCGACAAGGACGCTGTCTTCATGTCTCTTGTCGGCGGTGGGGCATTGCTGATCGGCACCATCCCGGCCGTGCTA TACATGGAGCGATTTGGTCGTCGGTACTGGGCGAATGTGATGCTGCCGGGTTTCTTCATTGGTCTTCTGCTCGTC GGTGTTGGCTACACTATCGATGCTGATAAGTACCCCGCCGCGGCACAGGGCATTTACTTCACAGGTATTGTGCTG TACATGGGTTTCTTCGGCTCGTACGCTTGTTTGACGTGGGTCGTGCCTTCCGAGGTCTTCCCTACATATCTGCGC TCGTATGGAATGACGACGGCCGACGCTAATTTGTTCCTGTGCTCGTTTATCGTTACGTACAACTTCACGCGCATG ATGGAGTCTATGCAGCGGATTGGTCTGACGCTTGGTTTCTACGGTGGTATTGCCATCCTCGGCTGGGCTTATCAG ATTATTTTCATGCCGGAGACTAAGAACAAAACCCTTGAGGAGATTGAGGAGATTTTCTCGCTCCCTACTGCTGTT ATTGTTAAGCGGAACTTGAAGCAGACGGCGCAGGTTATTCGGGACTTGTCGCGCTTCCGTCTTAAGAAAGTGTTT TCTCCTGAGCCGTACAACTAG |
| Transcript | >Pro_DTO377G3_2|g6967.t1 ATGGCCGACCTCAAAGATGTCGAGGCACCTCAGAACACGCACAGCGAAGACAAGGACGCCGTCGCCTTTGAGATG GACGATGTGGCGGACCAAAAGCTCCAAAACGGGCTGAGCGAAGCCGCCATGGATGCGGAACTGCAGCAGCTGGAA GAGCAGGTGCACATTATCCCCAAATCCCGCCTCGATATAACCATGTCCAATCCTGCTGCCTTTACCTACGTCCTC GTCGCCTTCGCGTCCATGGGAGGTATGCTGTCTGGTCTTGACCAGTCGCTTATCAGTGGCGCAAACCTCTACCTC CCCGTTGATCTAGGTCTGTCTGCAGCAGATAACAGTCTAGTCAACGCGGGCATGCCACTCGGAGCCGTTGCCGGT GCTCTTCTCCTTTCTCCAGCAAACGAGTACCTCGGTCGTCGTATGGCTATCATTGTCTCCTGTATTCTGTACACA ATCGGTGCCGCCCTGGAGGCTGGTGCTATAAACTTCGGAATGGTGTTCGCAGGCCGATTCATTCTTGGCGCTGGT GTCGGTTTGGAGGGTGGTACTGTCCCAGTCTATGTCGCAGAGTGTGTCCCCCGCAGACTCCGCGGTAACCTCGTA TCCTTGTACCAACTAAACATCGCCCTGGGTGAAGTCCTCGGCTACGCCGTCGCTGCAATGTTCGTTAGCGTCGAA GGAAACTGGCGTTACATCCTAGGCTCCTCGCTGGTCTTCTCAACAATCCTTTTCGTGGGTATGCTCTTCCTGCCA GAGAGTCCCCGATTCCTAATGCACAAGGGACGCGAGGTCGAAGCGTACGCAGTATGGAAGAAGATCCGTGGATTC AACGACCTCGAAGCCAAAGACGAGTTCCTCGGAATGCGACAAGCCGTCACAGCCGAAAGCGAGGAACAAGCCCAG TCGAAGAACTACCCCTGGATGGACTTCTTTACTGTACCTCGCGCACGCCGCGCCATGGTCTACGCCAATATCATG ATCTTCCTAGGACAGTTCACAGGCGTCAACGCAGTGATGTACTACATGTCGACGCTGATGCAGGCCATCGGCTTC GGCGACAAGGACGCTGTCTTCATGTCTCTTGTCGGCGGTGGGGCATTGCTGATCGGCACCATCCCGGCCGTGCTA TACATGGAGCGATTTGGTCGTCGGTACTGGGCGAATGTGATGCTGCCGGGTTTCTTCATTGGTCTTCTGCTCGTC GGTGTTGGCTACACTATCGATGCTGATAAGTACCCCGCCGCGGCACAGGGCATTTACTTCACAGGTATTGTGCTG TACATGGGTTTCTTCGGCTCGTACGCTTGTTTGACGTGGGTCGTGCCTTCCGAGGTCTTCCCTACATATCTGCGC TCGTATGGAATGACGACGGCCGACGCTAATTTGTTCCTGTGCTCGTTTATCGTTACGTACAACTTCACGCGCATG ATGGAGTCTATGCAGCGGATTGGTCTGACGCTTGGTTTCTACGGTGGTATTGCCATCCTCGGCTGGGCTTATCAG ATTATTTTCATGCCGGAGACTAAGAACAAAACCCTTGAGGAGATTGAGGAGATTTTCTCGCTCCCTACTGCTGTT ATTGTTAAGCGGAACTTGAAGCAGACGGCGCAGGTTATTCGGGACTTGTCGCGCTTCCGTCTTAAGAAAGTGTTT TCTCCTGAGCCGTACAACTAG |
| Gene | >Pro_DTO377G3_2|g6967.t1 ATGGCCGACCTCAAAGATGTCGAGGCACCTCAGAACACGCACAGCGAAGACAAGGACGCCGTCGCCTTTGAGATG GACGATGTGGCGGACCAAAAGCTCCAAAACGGGCTGAGCGAAGCCGCCATGGATGCGGAACTGCAGCAGCTGGAA GAGCAGGTGCACATTATCCCCAAATCCCGCCTCGATATAACCATGTCCAATCCTGCTGCCTTTACCTACGTCCTC GTCGCCTTCGCGTCCATGGGAGGTATGCTGTCTGGTCTTGACCAGTCGCTTATCAGTGGCGCAAACCTCTACCTC CCCGTTGATCTAGGTCTGTCTGCAGCAGATAACAGTCTAGTCAACGCGGGCATGCCACTCGGAGCCGTTGCCGGT GCTCTTCTCCTTTCTCCAGCAAACGAGTACCTCGGTCGTCGTATGGCTATCATTGTCTCCTGTATTCTGTACACA ATCGGTGCCGCCCTGGAGGCTGGTGCTATAAACTTCGGAATGGTGTTCGCAGGCCGATTCATTCTTGGCGCTGGT GTCGGTTTGGAGGGTGGTACTGTCCCAGTCTATGTCGCAGAGTGTGGTATGTTTTCCATCACTCCCCATCCTATC TGTATACCCAGTTCTAACCCCACTCTTTAATAGTCCCCCGCAGACTCCGCGGTAACCTCGTATCCTTGTACCAAC TAAACATCGCCCTGGGTGAAGTCCTCGGCTACGCCGTCGCTGCAATGTTCGTTAGCGTCGAAGGAAACTGGCGTT ACATCCTAGGCTCCTCGCTGGTCTTCTCAACAATCCTTTTCGTGGGTATGCTCTTCCTGCCAGAGAGTCCCCGAT TCCTAATGCACAAGGGACGCGAGGTCGAAGCGTACGCAGTATGGAAGAAGATCCGTGGATTCAACGACCTCGAAG CCAAAGACGAGTTCCTCGGAATGCGACAAGCCGTCACAGCCGAAAGCGAGGAACAAGCCCAGTCGAAGAACTACC CCTGGATGGACTTCTTTACTGTACCTCGCGCACGCCGCGCCATGGTCTACGCCAATATCATGATCTTCCTAGGAC AGTTCACAGGCGTCAACGCAGTGATGTACTACATGTCGACGCTGATGCAGGCCATCGGCTTCGGCGACAAGGACG CTGTCTTCATGTCTCTTGTCGGCGGTGGGGCATTGCTGATCGGCACCATCCCGGCCGTGCTATACATGGAGCGAT TTGGTCGTCGGTACTGGGCGAATGTGATGCTGCCGGGTTTCTTCATTGGTCTTCTGCTCGTCGGTGTTGGCTACA CTATCGATGCTGATAAGTACCCCGCCGCGGCACAGGGCATTTACTTCACAGGTATTGTGCTGTACATGGGTTTCT TCGGCTCGTACGCTTGTTTGACGTGGGTCGTGCCTTCCGAGGTCTTCCCTACATATCTGCGCTCGTATGGAATGA CGACGGCCGACGCTAATTTGTTCCTGTGCTCGTTTATCGTTACGTACAACTTCACGCGCATGATGGAGTCTATGC AGCGGATTGGTCTGACGCTTGGTTTCTACGGTGGTATTGCCATCCTCGGCTGGGCTTATCAGATTATTTTCATGC CGGAGACTAAGAACAAAACCCTTGAGGAGATTGAGGAGATTTTCTCGCTCCCTACTGCTGTTATTGTTAAGCGGA ACTTGAAGCAGACGGCGCAGGTTATTCGGGACTTGTCGCGCTTCCGTCTTAAGAAAGTGTTTTCTCCTGAGCCGT ACAACTAG |