Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6940.t1
Gene name
Locationscaffold_20:31298..33058
Strand-
Gene length (bp)1760
Transcript length (bp)1647
Coding sequence length (bp)1647
Protein length (aa) 549

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03972 MmgE_PrpD MmgE/PrpD family 5.3E-149 68 524

GO

GO Term Description Terminal node
GO:0016829 lyase activity Yes
GO:0003674 molecular_function No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6940.t1
MSLPAVRRLTHTSPRTLARISRFPTLTSSLSISPRISVPRTPRFSTMAARQSAAPAVHTDKSYDTEIQDMASYIH
DYKVDSDLAFDTARLVFLDTLGCGLEALKFKECTKLLGPVVEGTVVPNGTRVLGTPYQLDPVNGAFNIGAMIRWL
DYNDCWLAAEWGHPSDNLGGILAVADWISRTNRAGGNLGNGKILKIHDVLEAMIKAHEIQGVLALENSFNKVGLD
HVVLVKVATAAVVSKMLGLTEKQTADAITQAWVDGQSLRTYRHSPNTMSRKSWAAGDACQRAVNLVLKVQRGEGG
LRTVLTAPTWGFYDVLFKGKKFQFQRPYGSYVMENVLFKVSYPAEFHSQTAIEAAEKVNAKLASMGKSAKDIKEI
TNRTHEACIRIIDKQFKEMDNFADRDHCVQYMVATMLVFGRLTASDYADGSEAATSPLLESLRKKIRCVEDPKFT
TDYHDPTKRTIPNALTVTLNDGTVLEEVVVEAPLGHRLRREEAKPEILAKYKRHIEAHFDKARVDELLKLGWDRS
QLENYDVDQYVDLYVKDKMIASS*
Coding >Pro_DTO377G3_2|g6940.t1
ATGTCCTTGCCCGCAGTGAGACGCCTGACCCACACGTCTCCCCGCACTTTGGCCCGCATCTCCAGATTTCCCACT
TTGACTTCTTCCCTCTCCATCTCTCCACGTATCTCGGTGCCTCGCACTCCCCGTTTCTCTACAATGGCTGCTCGT
CAATCTGCCGCCCCGGCGGTGCACACCGACAAGTCCTATGACACTGAAATTCAGGACATGGCCAGTTACATCCAC
GACTATAAGGTGGATTCCGACTTGGCATTTGACACTGCTCGTCTGGTGTTCCTAGACACCCTTGGCTGTGGATTG
GAGGCTCTGAAGTTCAAGGAGTGCACAAAGCTCCTTGGCCCCGTTGTGGAGGGTACTGTTGTCCCCAATGGTACC
CGTGTGCTGGGCACTCCTTACCAGCTGGACCCCGTCAATGGCGCTTTCAACATCGGTGCTATGATCCGCTGGCTC
GACTACAATGACTGCTGGCTTGCTGCCGAGTGGGGTCACCCCTCAGACAACCTCGGTGGTATCTTGGCTGTGGCT
GACTGGATCTCCCGTACCAACCGCGCCGGCGGAAACCTCGGCAACGGCAAGATCCTGAAGATCCATGATGTTTTG
GAGGCCATGATCAAGGCCCACGAGATCCAGGGTGTCCTGGCTCTGGAGAACTCCTTCAACAAGGTCGGCCTCGAC
CACGTTGTCCTCGTCAAGGTTGCGACCGCCGCCGTCGTCTCCAAGATGTTGGGTCTTACCGAGAAGCAGACTGCC
GATGCTATTACCCAGGCTTGGGTTGACGGCCAGTCTCTCCGTACCTACCGTCACTCGCCCAACACCATGTCGCGT
AAGTCATGGGCTGCCGGTGACGCCTGCCAGCGCGCTGTCAACCTGGTTCTCAAGGTCCAGAGGGGTGAGGGTGGT
CTCCGCACCGTTCTCACTGCTCCTACCTGGGGCTTCTACGATGTCCTGTTCAAGGGCAAGAAGTTCCAGTTCCAG
CGCCCCTACGGCAGTTACGTCATGGAGAACGTTCTGTTCAAGGTTTCCTACCCTGCCGAGTTCCACTCTCAGACT
GCCATCGAGGCCGCTGAAAAGGTCAATGCCAAGCTTGCCTCCATGGGCAAGAGCGCCAAGGACATCAAGGAGATC
ACCAACCGCACACACGAGGCATGCATTCGCATCATTGACAAGCAGTTCAAGGAGATGGACAACTTCGCCGACCGC
GACCACTGTGTGCAGTACATGGTTGCCACCATGCTCGTCTTCGGCCGCCTGACCGCAAGCGACTACGCTGACGGC
TCCGAGGCCGCGACCTCCCCTCTGCTAGAGTCTCTCCGCAAGAAGATCCGCTGTGTGGAGGACCCCAAGTTCACC
ACCGACTACCACGACCCCACCAAGCGCACCATCCCCAACGCGCTGACCGTCACCTTGAACGACGGCACTGTCCTC
GAGGAGGTTGTTGTCGAGGCTCCTCTGGGCCACCGTCTCCGCCGCGAGGAGGCCAAGCCCGAGATTCTGGCCAAG
TACAAGCGTCACATCGAGGCGCACTTTGACAAGGCTCGTGTTGATGAGCTGCTGAAGCTGGGCTGGGACCGCTCC
CAGCTGGAGAACTACGACGTCGACCAGTATGTCGACCTTTACGTGAAGGACAAGATGATTGCATCCTCATAA
Transcript >Pro_DTO377G3_2|g6940.t1
ATGTCCTTGCCCGCAGTGAGACGCCTGACCCACACGTCTCCCCGCACTTTGGCCCGCATCTCCAGATTTCCCACT
TTGACTTCTTCCCTCTCCATCTCTCCACGTATCTCGGTGCCTCGCACTCCCCGTTTCTCTACAATGGCTGCTCGT
CAATCTGCCGCCCCGGCGGTGCACACCGACAAGTCCTATGACACTGAAATTCAGGACATGGCCAGTTACATCCAC
GACTATAAGGTGGATTCCGACTTGGCATTTGACACTGCTCGTCTGGTGTTCCTAGACACCCTTGGCTGTGGATTG
GAGGCTCTGAAGTTCAAGGAGTGCACAAAGCTCCTTGGCCCCGTTGTGGAGGGTACTGTTGTCCCCAATGGTACC
CGTGTGCTGGGCACTCCTTACCAGCTGGACCCCGTCAATGGCGCTTTCAACATCGGTGCTATGATCCGCTGGCTC
GACTACAATGACTGCTGGCTTGCTGCCGAGTGGGGTCACCCCTCAGACAACCTCGGTGGTATCTTGGCTGTGGCT
GACTGGATCTCCCGTACCAACCGCGCCGGCGGAAACCTCGGCAACGGCAAGATCCTGAAGATCCATGATGTTTTG
GAGGCCATGATCAAGGCCCACGAGATCCAGGGTGTCCTGGCTCTGGAGAACTCCTTCAACAAGGTCGGCCTCGAC
CACGTTGTCCTCGTCAAGGTTGCGACCGCCGCCGTCGTCTCCAAGATGTTGGGTCTTACCGAGAAGCAGACTGCC
GATGCTATTACCCAGGCTTGGGTTGACGGCCAGTCTCTCCGTACCTACCGTCACTCGCCCAACACCATGTCGCGT
AAGTCATGGGCTGCCGGTGACGCCTGCCAGCGCGCTGTCAACCTGGTTCTCAAGGTCCAGAGGGGTGAGGGTGGT
CTCCGCACCGTTCTCACTGCTCCTACCTGGGGCTTCTACGATGTCCTGTTCAAGGGCAAGAAGTTCCAGTTCCAG
CGCCCCTACGGCAGTTACGTCATGGAGAACGTTCTGTTCAAGGTTTCCTACCCTGCCGAGTTCCACTCTCAGACT
GCCATCGAGGCCGCTGAAAAGGTCAATGCCAAGCTTGCCTCCATGGGCAAGAGCGCCAAGGACATCAAGGAGATC
ACCAACCGCACACACGAGGCATGCATTCGCATCATTGACAAGCAGTTCAAGGAGATGGACAACTTCGCCGACCGC
GACCACTGTGTGCAGTACATGGTTGCCACCATGCTCGTCTTCGGCCGCCTGACCGCAAGCGACTACGCTGACGGC
TCCGAGGCCGCGACCTCCCCTCTGCTAGAGTCTCTCCGCAAGAAGATCCGCTGTGTGGAGGACCCCAAGTTCACC
ACCGACTACCACGACCCCACCAAGCGCACCATCCCCAACGCGCTGACCGTCACCTTGAACGACGGCACTGTCCTC
GAGGAGGTTGTTGTCGAGGCTCCTCTGGGCCACCGTCTCCGCCGCGAGGAGGCCAAGCCCGAGATTCTGGCCAAG
TACAAGCGTCACATCGAGGCGCACTTTGACAAGGCTCGTGTTGATGAGCTGCTGAAGCTGGGCTGGGACCGCTCC
CAGCTGGAGAACTACGACGTCGACCAGTATGTCGACCTTTACGTGAAGGACAAGATGATTGCATCCTCATAA
Gene >Pro_DTO377G3_2|g6940.t1
ATGTCCTTGCCCGCAGTGAGACGCCTGACCCACACGTCTCCCCGCACTTTGGCCCGCATCTCCAGATTTCCCACT
TTGACTTCTTCCCTCTCCATCTCTCCACGTATCTCGGTGCCTCGCACTCCCCGTTTCTCTACAATGGCTGCTCGT
CAATCTGCCGCCCCGGCGGTGCACACCGACAAGTCCTATGACACTGAAATTCAGGACATGGCCAGTTACATCCAC
GACTATAAGGTGGATTCCGACTTGGCAGTAAGTTTACCCGGCCCGGTTAGATTAAGCACCGACTAATTCTAAATT
TTTAGTTTGACACTGCTCGTCTGGTGTTCCTAGACACCCTTGGCTGTGGATTGGAGGCTCTGAAGTTCAAGGAGT
GCACAAAGCTCCTTGGCCCCGTTGTGGAGGGTACTGTTGTCCCCAATGGTACCCGTGTGCTGGGCACTCCTTACC
AGCTGGACCCCGTCAATGGCGCTTTCAACATCGGTGCTATGATCCGCTGGCTCGACTACAATGACTGCTGGCTTG
CTGCCGAGTGGGGTCACCCCTCAGACAACCTCGGTGGTATCTTGGCTGTGGCTGACTGGATCTCCCGTACCAACC
GCGCCGGCGGAAACCTCGGCAACGGCAAGATCCTGAAGATCCATGATGTTTTGGAGGCCATGATCAAGGCCCACG
AGATCCAGGGTGTCCTGGCTCTGGAGAACTCCTTCAACAAGGTCGGCCTCGACCACGTTGTCCTCGTCAAGGTTG
CGACCGCCGCCGTCGTCTCCAAGATGTTGGGTCTTACCGAGAAGCAGACTGCCGATGCTATTACCCAGGCTTGGG
TTGACGGCCAGTCTCTCCGTACCTACCGTCACTCGCCCAACACCATGTCGCGTAAGTCATGGGCTGCCGGTGACG
CCTGCCAGCGCGCTGTCAACCTGGTTCTCAAGGTCCAGAGGGGTGAGGGTGGTCTCCGCACCGTTCTCACTGCTC
CTACCTGGGGCTTCTACGATGTCCTGTTCAAGGGCAAGAAGTTCCAGTTCCAGCGCCCCTACGGCAGTTACGTCA
TGGAGAACGTTCTGTTCAAGGTTTCCTACCCTGGTAAGTTTAAATTTGCAGAAATGACACTATACAAAATTGACA
ACAACTAACTCCTTCAAGCCGAGTTCCACTCTCAGACTGCCATCGAGGCCGCTGAAAAGGTCAATGCCAAGCTTG
CCTCCATGGGCAAGAGCGCCAAGGACATCAAGGAGATCACCAACCGCACACACGAGGCATGCATTCGCATCATTG
ACAAGCAGTTCAAGGAGATGGACAACTTCGCCGACCGCGACCACTGTGTGCAGTACATGGTTGCCACCATGCTCG
TCTTCGGCCGCCTGACCGCAAGCGACTACGCTGACGGCTCCGAGGCCGCGACCTCCCCTCTGCTAGAGTCTCTCC
GCAAGAAGATCCGCTGTGTGGAGGACCCCAAGTTCACCACCGACTACCACGACCCCACCAAGCGCACCATCCCCA
ACGCGCTGACCGTCACCTTGAACGACGGCACTGTCCTCGAGGAGGTTGTTGTCGAGGCTCCTCTGGGCCACCGTC
TCCGCCGCGAGGAGGCCAAGCCCGAGATTCTGGCCAAGTACAAGCGTCACATCGAGGCGCACTTTGACAAGGCTC
GTGTTGATGAGCTGCTGAAGCTGGGCTGGGACCGCTCCCAGCTGGAGAACTACGACGTCGACCAGTATGTCGACC
TTTACGTGAAGGACAAGATGATTGCATCCTCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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