Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6938.t1
Gene name
Locationscaffold_20:28241..29320
Strand-
Gene length (bp)1079
Transcript length (bp)975
Coding sequence length (bp)975
Protein length (aa) 325

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01095 Pectinesterase Pectinesterase 4.8E-53 40 296

GO

GO Term Description Terminal node
GO:0042545 cell wall modification Yes
GO:0030599 pectinesterase activity Yes
GO:0071555 cell wall organization No
GO:0008150 biological_process No
GO:0071840 cellular component organization or biogenesis No
GO:0071554 cell wall organization or biogenesis No
GO:0009987 cellular process No
GO:0045229 external encapsulating structure organization No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0016043 cellular component organization No
GO:0052689 carboxylic ester hydrolase activity No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No
GO:0016787 hydrolase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6938.t1
MQLHAFLLAALSTAVLGAPAKLVTRTARTTAPAGCLTVGSSGKYSTIGAALTALGSSSAAACIYVASGTYEEQLT
INYAGALTLYGETTYEESYKENTVTITHTISSPEAGSLDASATVNVVADGFKMHNINVVNGFGKGAQAVALVANA
DKLGFYACQFSGYQDTLYAKSGTQYYANSRIEGAVDYIFGAASAWFNNCDIVSNGPGAITASSRQTTTDTTWYAL
DRCNIKAASSAVLDSTVYLGRPWRGLARVIYQNSNLGSIVNAKGWTTLAEGATPLYYEYNNSGAGSDTSAREYET
PISAAVTKDTVLGSDYADWIESGY*
Coding >Pro_DTO377G3_2|g6938.t1
ATGCAACTACACGCTTTCCTCCTCGCAGCCCTCAGCACGGCGGTCCTGGGCGCACCCGCCAAACTAGTCACCCGC
ACAGCTAGGACCACTGCCCCCGCAGGTTGCCTGACAGTCGGATCGAGTGGGAAATACTCGACTATCGGCGCTGCA
CTTACTGCTCTCGGCTCTTCCTCAGCAGCAGCTTGTATCTATGTCGCAAGCGGCACGTACGAGGAACAGCTTACT
ATTAACTATGCCGGTGCTCTGACTTTGTATGGCGAGACGACGTATGAGGAGTCATATAAGGAGAACACTGTTACC
ATTACGCATACGATATCTTCGCCCGAGGCTGGCTCACTGGATGCGAGCGCTACCGTGAACGTTGTCGCCGATGGG
TTCAAGATGCACAATATCAATGTGGTGAACGGGTTCGGGAAAGGCGCGCAGGCTGTTGCACTCGTCGCCAATGCC
GATAAACTCGGCTTCTATGCGTGTCAGTTCAGTGGATACCAGGATACTTTGTACGCCAAGTCGGGAACACAATAC
TACGCCAACAGCAGGATCGAGGGAGCCGTGGACTACATCTTCGGCGCCGCCTCCGCCTGGTTCAACAACTGCGAT
ATAGTCTCCAACGGCCCTGGGGCCATCACTGCCAGTTCGCGCCAGACAACTACCGACACCACCTGGTATGCACTC
GACCGCTGCAATATCAAGGCTGCGTCTAGTGCTGTCCTCGATAGCACTGTCTATCTTGGCCGTCCATGGCGAGGC
CTTGCTCGCGTCATCTACCAGAACTCCAACCTGGGTAGTATAGTCAATGCCAAGGGCTGGACGACATTAGCGGAA
GGCGCCACACCACTCTATTATGAGTACAACAATAGCGGGGCCGGGTCAGATACTTCTGCGCGCGAGTACGAGACT
CCTATATCGGCGGCAGTCACAAAGGACACGGTTCTAGGAAGCGACTATGCTGATTGGATTGAATCAGGCTATTAG
Transcript >Pro_DTO377G3_2|g6938.t1
ATGCAACTACACGCTTTCCTCCTCGCAGCCCTCAGCACGGCGGTCCTGGGCGCACCCGCCAAACTAGTCACCCGC
ACAGCTAGGACCACTGCCCCCGCAGGTTGCCTGACAGTCGGATCGAGTGGGAAATACTCGACTATCGGCGCTGCA
CTTACTGCTCTCGGCTCTTCCTCAGCAGCAGCTTGTATCTATGTCGCAAGCGGCACGTACGAGGAACAGCTTACT
ATTAACTATGCCGGTGCTCTGACTTTGTATGGCGAGACGACGTATGAGGAGTCATATAAGGAGAACACTGTTACC
ATTACGCATACGATATCTTCGCCCGAGGCTGGCTCACTGGATGCGAGCGCTACCGTGAACGTTGTCGCCGATGGG
TTCAAGATGCACAATATCAATGTGGTGAACGGGTTCGGGAAAGGCGCGCAGGCTGTTGCACTCGTCGCCAATGCC
GATAAACTCGGCTTCTATGCGTGTCAGTTCAGTGGATACCAGGATACTTTGTACGCCAAGTCGGGAACACAATAC
TACGCCAACAGCAGGATCGAGGGAGCCGTGGACTACATCTTCGGCGCCGCCTCCGCCTGGTTCAACAACTGCGAT
ATAGTCTCCAACGGCCCTGGGGCCATCACTGCCAGTTCGCGCCAGACAACTACCGACACCACCTGGTATGCACTC
GACCGCTGCAATATCAAGGCTGCGTCTAGTGCTGTCCTCGATAGCACTGTCTATCTTGGCCGTCCATGGCGAGGC
CTTGCTCGCGTCATCTACCAGAACTCCAACCTGGGTAGTATAGTCAATGCCAAGGGCTGGACGACATTAGCGGAA
GGCGCCACACCACTCTATTATGAGTACAACAATAGCGGGGCCGGGTCAGATACTTCTGCGCGCGAGTACGAGACT
CCTATATCGGCGGCAGTCACAAAGGACACGGTTCTAGGAAGCGACTATGCTGATTGGATTGAATCAGGCTATTAG
Gene >Pro_DTO377G3_2|g6938.t1
ATGCAACTACACGCTTTCCTCCTCGCAGCCCTCAGCACGGCGGTCCTGGGCGCACCCGCCAAACTAGTCACCCGC
ACAGCTAGGACCACTGCCCCCGCAGGTTGCCTGACAGTCGGATCGAGTGGGAAATACTCGACTATCGGCGCTGCA
CTTACTGCTCTCGGCTCTTCCTCAGCAGCAGCTTGTATCTATGTCGCAAGCGGCACGTACGAGGAACAGCTTACT
ATTAACTATGCCGGTGCTCTGACTTTGTATGGCGAGACGACGTATGAGGAGTCATATAAGGAGAACACTGTTACC
ATTACGCATACGATATCTTCGCCCGAGGCTGGCTCACTGGATGCGAGCGCTACCGTGAACGTTGTCGCCGATGGG
TTCAAGATGCACAATATCAATGTGGTGAACGGGTTCGGGAAAGGCGCGCAGGCTGTTGCGTGAGTATCTATTTCT
TTGCCTTGATATTGAATTATTGACTGATATACCAGACTCGTCGCCAATGCCGATAAACTCGGCTTCTATGCGTGT
CAGTTCAGTGGATACCAGGATACTTTGTACGCCAAGTCGGGAACACAATACTACGCCAACAGCAGGATCGAGGGT
AAGTCATTCTCTATCACATCCCTATTCACTATAAATACGAACGGTTTCTAGGAGCCGTGGACTACATCTTCGGCG
CCGCCTCCGCCTGGTTCAACAACTGCGATATAGTCTCCAACGGCCCTGGGGCCATCACTGCCAGTTCGCGCCAGA
CAACTACCGACACCACCTGGTATGCACTCGACCGCTGCAATATCAAGGCTGCGTCTAGTGCTGTCCTCGATAGCA
CTGTCTATCTTGGCCGTCCATGGCGAGGCCTTGCTCGCGTCATCTACCAGAACTCCAACCTGGGTAGTATAGTCA
ATGCCAAGGGCTGGACGACATTAGCGGAAGGCGCCACACCACTCTATTATGAGTACAACAATAGCGGGGCCGGGT
CAGATACTTCTGCGCGCGAGTACGAGACTCCTATATCGGCGGCAGTCACAAAGGACACGGTTCTAGGAAGCGACT
ATGCTGATTGGATTGAATCAGGCTATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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