Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g6936.t1
Gene name
Location	scaffold_20:26163..27125
Strand	+
Gene length (bp)	962
Transcript length (bp)	609
Coding sequence length (bp)	609
Protein length (aa)	203

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12678	zf-rbx1	RING-H2 zinc finger domain	3.4E-08	153	191
PF12861	zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	2.1E-06	152	194
PF00097	zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	7.3E-05	164	190

GO

GO Term	Description	Terminal node
GO:0008270	zinc ion binding	Yes
GO:0004842	ubiquitin-protein transferase activity	Yes
GO:0005680	anaphase-promoting complex	Yes
GO:0046872	metal ion binding	Yes
GO:0005488	binding	No
GO:1902494	catalytic complex	No
GO:0044464	cell part	No
GO:0031461	cullin-RING ubiquitin ligase complex	No
GO:0140096	catalytic activity, acting on a protein	No
GO:0043169	cation binding	No
GO:0019787	ubiquitin-like protein transferase activity	No
GO:0016740	transferase activity	No
GO:0044446	intracellular organelle part	No
GO:0003824	catalytic activity	No
GO:1990234	transferase complex	No
GO:0044424	intracellular part	No
GO:0000151	ubiquitin ligase complex	No
GO:0046914	transition metal ion binding	No
GO:0005575	cellular_component	No
GO:0032991	protein-containing complex	No
GO:0003674	molecular_function	No
GO:0043167	ion binding	No
GO:0044428	nuclear part	No
GO:0044422	organelle part	No
GO:0000152	nuclear ubiquitin ligase complex	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	10	32	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g6936.t1 MADDSMPREEILGVVIGAVALFSLISMIPVMIMRHHRRRAAIRAMAAARVLPPVYQVQLQNVLGQPVSVDRWLEE QNVPANAQQYGQDTWAGHSVPPPYRDPRVFVEADPCPICLSALSSSPYLACPDPAVLADDQHNPNPTTRPDPRCS CGAHSPPDSEVLVLNRCKHAFHLDCLKSWFEYRRYKCPICQASYSPEEEARG*
Coding	>Pro_DTO377G3_2\|g6936.t1 ATGGCGGACGATTCTATGCCGCGAGAGGAGATACTCGGGGTTGTGATTGGGGCAGTTGCGCTGTTTTCCCTGATC AGCATGATTCCGGTCATGATCATGAGACATCACCGACGACGCGCCGCCATACGGGCCATGGCCGCAGCCCGAGTT CTCCCACCGGTATATCAGGTACAGTTGCAGAATGTGTTGGGCCAACCTGTGTCCGTGGACCGATGGTTGGAAGAA CAGAACGTGCCTGCCAATGCGCAACAATATGGCCAAGATACTTGGGCTGGGCATTCGGTCCCTCCGCCCTATCGG GATCCGCGAGTTTTCGTGGAGGCGGATCCATGCCCCATCTGTCTGTCAGCACTATCGTCGTCCCCATACCTCGCC TGTCCCGATCCAGCCGTGCTGGCTGACGACCAGCATAATCCCAACCCGACTACACGACCAGACCCCCGCTGCAGC TGCGGGGCACATTCCCCGCCCGATAGCGAGGTCCTCGTACTCAATCGCTGCAAGCATGCCTTCCATCTAGACTGT CTGAAGTCCTGGTTTGAATACCGTCGGTATAAGTGTCCGATCTGCCAAGCTTCGTATTCGCCAGAGGAGGAGGCA CGAGGATGA
Transcript	>Pro_DTO377G3_2\|g6936.t1 ATGGCGGACGATTCTATGCCGCGAGAGGAGATACTCGGGGTTGTGATTGGGGCAGTTGCGCTGTTTTCCCTGATC AGCATGATTCCGGTCATGATCATGAGACATCACCGACGACGCGCCGCCATACGGGCCATGGCCGCAGCCCGAGTT CTCCCACCGGTATATCAGGTACAGTTGCAGAATGTGTTGGGCCAACCTGTGTCCGTGGACCGATGGTTGGAAGAA CAGAACGTGCCTGCCAATGCGCAACAATATGGCCAAGATACTTGGGCTGGGCATTCGGTCCCTCCGCCCTATCGG GATCCGCGAGTTTTCGTGGAGGCGGATCCATGCCCCATCTGTCTGTCAGCACTATCGTCGTCCCCATACCTCGCC TGTCCCGATCCAGCCGTGCTGGCTGACGACCAGCATAATCCCAACCCGACTACACGACCAGACCCCCGCTGCAGC TGCGGGGCACATTCCCCGCCCGATAGCGAGGTCCTCGTACTCAATCGCTGCAAGCATGCCTTCCATCTAGACTGT CTGAAGTCCTGGTTTGAATACCGTCGGTATAAGTGTCCGATCTGCCAAGCTTCGTATTCGCCAGAGGAGGAGGCA CGAGGATGA
Gene	>Pro_DTO377G3_2\|g6936.t1 ATGGCGGACGATTCTATGCCGCGAGAGGAGATACTCGGGGTTGTGATTGGGGCAGTTGCGCTGTTTTCCCTGATC AGCATGATTCCGGTGTAAGTACGGAGGCGCGAGAAGTCTTGGCAACCCCCGCGCTTCATGCATGCGAATTGTTCT CGAACTTCCGAAGTGCCGATCACTGATTTGTATGATTTTCCGTCTAGCATGATCATGAGACATCACCGACGACGC GCCGCCATACGGGCCATGGCCGCAGCCCGAGTTCTCCCACCGGTATATCAGGTACAGTTGCAGAATGTGTTGGGC CAACCTGTGTCCGTGGACCGATGGTTGGAAGAACAGAACGTGCCTGCCAATGCGCAACAATATGGCCAAGATACT TGGTAAGTGCGCTATTCCAGCATTCCACCGGTCTCCGATTCCGGCTGCCCCTCCTCGAGCCTTTTGGCCCCGCGG CTGGATGATGTCGTGTGGGGACACTAGGGCTGGGCATTCGGTCCCTCCGCCCTATCGGGATCCGCGAGTTTTCGT GGAGGCGGATCCATGGTTTCTGGGCAAGGCGTTATTGCGCCCAAGGCCAATTTCCGGTGTTCCTGGATAAACACG CGTGGTCTTGGCTAGAGATAGCAGACCGTGCAAGCGACTCTGGACACATCGACTGAATCTTCTAGAATCAAGCTA ACTCACCCAGCCCCATCTGTCTGTCAGCACTATCGTCGTCCCCATACCTCGCCTGTCCCGATCCAGCCGTGCTGG CTGACGACCAGCATAATCCCAACCCGACTACACGACCAGACCCCCGCTGCAGCTGCGGGGCACATTCCCCGCCCG ATAGCGAGGTCCTCGTACTCAATCGCTGCAAGCATGCCTTCCATCTAGACTGTCTGAAGTCCTGGTTTGAATACC GTCGGTATAAGTGTCCGATCTGCCAAGCTTCGTATTCGCCAGAGGAGGAGGCACGAGGATGA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences