Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6915.t1
Gene name
Locationscaffold_19:358103..359755
Strand+
Gene length (bp)1652
Transcript length (bp)1554
Coding sequence length (bp)1554
Protein length (aa) 518

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00270 DEAD DEAD/DEAH box helicase 1.5E-42 71 230
PF00271 Helicase_C Helicase conserved C-terminal domain 7.9E-27 272 378

GO

GO Term Description Terminal node
GO:0005524 ATP binding Yes
GO:0003676 nucleic acid binding Yes
GO:0000166 nucleotide binding No
GO:0008144 drug binding No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0032553 ribonucleotide binding No
GO:0017076 purine nucleotide binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0097367 carbohydrate derivative binding No
GO:0030554 adenyl nucleotide binding No
GO:1901265 nucleoside phosphate binding No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0032559 adenyl ribonucleotide binding No
GO:0043168 anion binding No
GO:0032555 purine ribonucleotide binding No
GO:0036094 small molecule binding No
GO:0097159 organic cyclic compound binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 44 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6915.t1
MADALAAQLSNTKLEATSEQKLQDTLNLPPKDTRPQTEDVTATKGLEFEDFYIKRELMMGIFEAGFEKPSPIQEE
TIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSQVCKTLGKHLGINVMVTTG
GTGLMDDIIRLNDPVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLLSPEFTPVIEQLMSFHPKDRQVMLF
SATFPLIVKSFKDKHMRNPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLA
KKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSG
RFGHLGLAINLINWEDRFNLYKIEQELGTEIQPIPQNIDKKLYVYDSPENIPRPISNPPPQTGAGSVNMNGDRQP
RRNNNNGQPQSQQQGQQHGQQHGQYYNNRGRGSYRGRGQGQRRGAQNDANRITFGQPNPGQPQAPLS*
Coding >Pro_DTO377G3_2|g6915.t1
ATGGCCGACGCGCTTGCTGCACAACTCAGCAATACTAAGCTGGAAGCAACTTCAGAGCAAAAACTGCAGGACACA
TTGAATCTCCCCCCCAAAGATACTCGCCCACAAACTGAGGATGTTACTGCCACTAAAGGCCTCGAATTCGAGGAC
TTCTACATCAAACGTGAACTCATGATGGGCATTTTTGAGGCTGGATTTGAAAAGCCCTCCCCTATCCAAGAAGAG
ACAATACCAGTTGCCCTCACAGGCAGAGATATCTTGGCCCGAGCTAAAAACGGCACTGGAAAGACTGCCGCCTTT
GTTATTCCAACTCTCGAGCGCATAAACCCCAAAAGTACAAAGACCCAGGCCTTGATTCTGGTTCCCACACGAGAG
CTCGCACTCCAGACATCACAGGTCTGCAAGACCCTAGGCAAACACCTTGGTATCAATGTTATGGTCACCACCGGT
GGAACTGGCTTGATGGACGACATTATCCGGTTGAATGACCCTGTTCACATTCTTGTGGGAACCCCCGGACGAGTA
TTGGATTTGGCTAGCAAAGGTGTCGCCGACTTGAGCGAATGCCCGACATTTGTGATGGATGAAGCAGACAAGTTG
CTGTCTCCTGAATTTACTCCTGTCATTGAGCAACTTATGTCCTTCCATCCCAAGGATCGCCAGGTCATGCTCTTC
AGTGCCACTTTCCCTTTGATTGTCAAGTCATTTAAGGACAAGCACATGCGTAACCCTTACGAGATCAACCTTATG
GACGAACTTACCCTGCGTGGTATCACCCAGTACTATGCTTTCGTTGAGGAGAAGCAAAAGGTTCATTGCTTAAAC
ACTCTTTTCTCCAAGCTTCAGATCAACCAGTCAATCATTTTCTGCAACTCAACCAACCGAGTTGAGCTTCTAGCC
AAAAAAATCACCGAACTCGGCTATTCGTGCTTTTACTCTCATGCTCGGATGCTTCAGCAGCACCGTAACCGAGTC
TTCCATGACTTCCGCAATGGCGTATGCCGCAACTTGGTTTGCTCTGACCTGTTGACTCGCGGTATCGATATTCAA
GCGGTCAATGTTGTGATCAACTTTGATTTCCCGAAGAACGCGGAGACTTATCTTCACCGTATCGGCCGTTCGGGC
CGTTTCGGACACTTGGGTCTCGCCATTAACCTCATCAACTGGGAGGATCGGTTCAATCTGTACAAGATTGAGCAA
GAACTAGGCACTGAAATCCAGCCCATCCCGCAGAATATTGACAAGAAGCTTTATGTCTATGATTCTCCTGAGAAC
ATCCCTCGACCCATCTCCAACCCTCCACCTCAAACTGGAGCTGGATCCGTGAACATGAACGGAGACCGTCAACCT
CGTCGGAACAACAACAATGGGCAACCACAGAGTCAACAACAGGGTCAACAGCATGGTCAACAGCATGGTCAATAC
TACAATAATCGAGGACGCGGTTCTTATCGTGGTCGTGGACAGGGCCAACGTCGTGGGGCACAAAATGACGCCAAC
CGGATTACCTTTGGTCAACCAAATCCGGGTCAACCCCAGGCGCCTCTTTCTTAG
Transcript >Pro_DTO377G3_2|g6915.t1
ATGGCCGACGCGCTTGCTGCACAACTCAGCAATACTAAGCTGGAAGCAACTTCAGAGCAAAAACTGCAGGACACA
TTGAATCTCCCCCCCAAAGATACTCGCCCACAAACTGAGGATGTTACTGCCACTAAAGGCCTCGAATTCGAGGAC
TTCTACATCAAACGTGAACTCATGATGGGCATTTTTGAGGCTGGATTTGAAAAGCCCTCCCCTATCCAAGAAGAG
ACAATACCAGTTGCCCTCACAGGCAGAGATATCTTGGCCCGAGCTAAAAACGGCACTGGAAAGACTGCCGCCTTT
GTTATTCCAACTCTCGAGCGCATAAACCCCAAAAGTACAAAGACCCAGGCCTTGATTCTGGTTCCCACACGAGAG
CTCGCACTCCAGACATCACAGGTCTGCAAGACCCTAGGCAAACACCTTGGTATCAATGTTATGGTCACCACCGGT
GGAACTGGCTTGATGGACGACATTATCCGGTTGAATGACCCTGTTCACATTCTTGTGGGAACCCCCGGACGAGTA
TTGGATTTGGCTAGCAAAGGTGTCGCCGACTTGAGCGAATGCCCGACATTTGTGATGGATGAAGCAGACAAGTTG
CTGTCTCCTGAATTTACTCCTGTCATTGAGCAACTTATGTCCTTCCATCCCAAGGATCGCCAGGTCATGCTCTTC
AGTGCCACTTTCCCTTTGATTGTCAAGTCATTTAAGGACAAGCACATGCGTAACCCTTACGAGATCAACCTTATG
GACGAACTTACCCTGCGTGGTATCACCCAGTACTATGCTTTCGTTGAGGAGAAGCAAAAGGTTCATTGCTTAAAC
ACTCTTTTCTCCAAGCTTCAGATCAACCAGTCAATCATTTTCTGCAACTCAACCAACCGAGTTGAGCTTCTAGCC
AAAAAAATCACCGAACTCGGCTATTCGTGCTTTTACTCTCATGCTCGGATGCTTCAGCAGCACCGTAACCGAGTC
TTCCATGACTTCCGCAATGGCGTATGCCGCAACTTGGTTTGCTCTGACCTGTTGACTCGCGGTATCGATATTCAA
GCGGTCAATGTTGTGATCAACTTTGATTTCCCGAAGAACGCGGAGACTTATCTTCACCGTATCGGCCGTTCGGGC
CGTTTCGGACACTTGGGTCTCGCCATTAACCTCATCAACTGGGAGGATCGGTTCAATCTGTACAAGATTGAGCAA
GAACTAGGCACTGAAATCCAGCCCATCCCGCAGAATATTGACAAGAAGCTTTATGTCTATGATTCTCCTGAGAAC
ATCCCTCGACCCATCTCCAACCCTCCACCTCAAACTGGAGCTGGATCCGTGAACATGAACGGAGACCGTCAACCT
CGTCGGAACAACAACAATGGGCAACCACAGAGTCAACAACAGGGTCAACAGCATGGTCAACAGCATGGTCAATAC
TACAATAATCGAGGACGCGGTTCTTATCGTGGTCGTGGACAGGGCCAACGTCGTGGGGCACAAAATGACGCCAAC
CGGATTACCTTTGGTCAACCAAATCCGGGTCAACCCCAGGCGCCTCTTTCTTAG
Gene >Pro_DTO377G3_2|g6915.t1
ATGGCCGACGCGCTTGCTGCACAACTCAGCAATACTAAGCTGTAGGTCGATCTGTTTCCTTAGTCCCTAAAACAA
ATCTGACTAGACCAGGGAAGCAACTTCAGAGCAAAAACTGCAGGACACATTGAATCTCCCCCCCAAAGATACTCG
CCCACAAACTGAGGTGAATATATTGTGACTGCCAGTCAATGCTAAATACTGACTTTGACTAGGATGTTACTGCCA
CTAAAGGCCTCGAATTCGAGGACTTCTACATCAAACGTGAACTCATGATGGGCATTTTTGAGGCTGGATTTGAAA
AGCCCTCCCCTATCCAAGAAGAGACAATACCAGTTGCCCTCACAGGCAGAGATATCTTGGCCCGAGCTAAAAACG
GCACTGGAAAGACTGCCGCCTTTGTTATTCCAACTCTCGAGCGCATAAACCCCAAAAGTACAAAGACCCAGGCCT
TGATTCTGGTTCCCACACGAGAGCTCGCACTCCAGACATCACAGGTCTGCAAGACCCTAGGCAAACACCTTGGTA
TCAATGTTATGGTCACCACCGGTGGAACTGGCTTGATGGACGACATTATCCGGTTGAATGACCCTGTTCACATTC
TTGTGGGAACCCCCGGACGAGTATTGGATTTGGCTAGCAAAGGTGTCGCCGACTTGAGCGAATGCCCGACATTTG
TGATGGATGAAGCAGACAAGTTGCTGTCTCCTGAATTTACTCCTGTCATTGAGCAACTTATGTCCTTCCATCCCA
AGGATCGCCAGGTCATGCTCTTCAGTGCCACTTTCCCTTTGATTGTCAAGTCATTTAAGGACAAGCACATGCGTA
ACCCTTACGAGATCAACCTTATGGACGAACTTACCCTGCGTGGTATCACCCAGTACTATGCTTTCGTTGAGGAGA
AGCAAAAGGTTCATTGCTTAAACACTCTTTTCTCCAAGCTTCAGATCAACCAGTCAATCATTTTCTGCAACTCAA
CCAACCGAGTTGAGCTTCTAGCCAAAAAAATCACCGAACTCGGCTATTCGTGCTTTTACTCTCATGCTCGGATGC
TTCAGCAGCACCGTAACCGAGTCTTCCATGACTTCCGCAATGGCGTATGCCGCAACTTGGTTTGCTCTGACCTGT
TGACTCGCGGTATCGATATTCAAGCGGTCAATGTTGTGATCAACTTTGATTTCCCGAAGAACGCGGAGACTTATC
TTCACCGTATCGGCCGTTCGGGCCGTTTCGGACACTTGGGTCTCGCCATTAACCTCATCAACTGGGAGGATCGGT
TCAATCTGTACAAGATTGAGCAAGAACTAGGCACTGAAATCCAGCCCATCCCGCAGAATATTGACAAGAAGCTTT
ATGTCTATGATTCTCCTGAGAACATCCCTCGACCCATCTCCAACCCTCCACCTCAAACTGGAGCTGGATCCGTGA
ACATGAACGGAGACCGTCAACCTCGTCGGAACAACAACAATGGGCAACCACAGAGTCAACAACAGGGTCAACAGC
ATGGTCAACAGCATGGTCAATACTACAATAATCGAGGACGCGGTTCTTATCGTGGTCGTGGACAGGGCCAACGTC
GTGGGGCACAAAATGACGCCAACCGGATTACCTTTGGTCAACCAAATCCGGGTCAACCCCAGGCGCCTCTTTCTT
AG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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