Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6873.t1
Gene name
Locationscaffold_19:248574..250155
Strand-
Gene length (bp)1581
Transcript length (bp)1440
Coding sequence length (bp)1440
Protein length (aa) 480

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05004 IFRD Interferon-related developmental regulator (IFRD) 3.3E-88 50 368

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 47 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6873.t1
MPDLRRQIFESGKTVSRKAASREASRTNSPASSKQTSRQGSRNASRAPSDEEDSGFLSDETSMSIGSLDDENPEQ
DNPDWEHELGERIQEILDRKRSSVQGREEALQVFCRLTKYHYTVEEIHGVVPELLAAFERSVRTEISVREATLGL
RAIELLVISAFDTTVYENTESLLTRTVRDSASPLVKAAAIHCLGACTIFGGAGEDGILEQMSFLLDIIASDGQSV
DATDDPTIVTAALQQWGFLATEVDDFEEESEEAVQIFMDQLDSSDSNVQIAAGENIALLYEKSYSPQEDDEDEES
ADSNDDSDEHEHDSTSGPKLVKRYNAYHNTPELESQLQNLATVHGKQISKRDKKSLHSNFASILTTVENPGRGPR
YNTAIDQNTNRHYGSTLTVKIGRHGVMTIDRWWKWVRLTALRRILQGGFSEHYFQGNRSVLNSLPVMMRMANQNY
GSVDRQSARKAAKMRNSRRWTAPQSDDDE*
Coding >Pro_DTO377G3_2|g6873.t1
ATGCCCGATCTACGTCGCCAGATCTTCGAGAGCGGCAAGACTGTCTCACGAAAGGCAGCATCCCGTGAAGCATCC
CGCACCAACTCCCCCGCCAGTTCAAAGCAGACCTCGCGCCAGGGCTCTCGTAATGCCAGCAGAGCTCCTTCAGAT
GAAGAAGACTCGGGATTCCTCTCTGACGAAACATCTATGAGCATCGGATCTCTCGACGATGAGAACCCCGAACAA
GATAATCCCGATTGGGAACACGAACTCGGCGAGCGTATTCAAGAAATCCTTGATCGCAAGCGCAGCAGTGTCCAA
GGCCGCGAGGAGGCCCTGCAAGTATTCTGCCGCCTGACCAAATACCACTACACAGTAGAAGAAATCCACGGCGTT
GTTCCAGAACTACTGGCCGCATTTGAGCGAAGCGTCCGCACCGAGATTAGTGTGCGCGAAGCAACCCTTGGCTTG
CGCGCTATCGAGTTGCTTGTCATCTCAGCTTTCGACACCACCGTTTACGAAAACACCGAGTCCTTGCTCACCCGT
ACCGTTCGTGACTCTGCTTCCCCTCTTGTCAAGGCAGCAGCTATTCACTGCCTTGGGGCGTGTACTATCTTCGGA
GGTGCCGGTGAAGATGGCATTCTTGAACAGATGAGTTTCCTCCTGGACATCATCGCCTCGGATGGCCAATCCGTC
GATGCCACAGACGACCCCACCATTGTTACTGCCGCGCTCCAGCAGTGGGGATTCCTCGCCACCGAAGTCGACGAT
TTTGAAGAAGAAAGCGAGGAAGCAGTCCAGATCTTCATGGATCAGCTCGACAGCTCCGATTCCAACGTGCAAATT
GCAGCAGGCGAAAACATTGCCCTACTCTATGAGAAGAGCTACAGTCCCCAAGAGGATGACGAAGACGAGGAGAGC
GCTGATTCAAACGATGACAGCGACGAGCATGAGCACGATTCCACATCCGGTCCCAAGCTCGTGAAAAGATACAAC
GCTTACCACAACACTCCCGAGCTGGAGAGCCAACTTCAGAACCTGGCCACCGTCCACGGCAAGCAGATAAGCAAG
CGCGACAAGAAGTCCCTCCACAGCAACTTCGCCTCGATCCTCACCACTGTCGAGAACCCAGGCCGCGGTCCTCGT
TACAACACCGCCATCGACCAGAACACCAACCGTCATTACGGCAGCACTCTCACTGTCAAGATCGGCCGCCATGGA
GTCATGACTATCGACCGCTGGTGGAAGTGGGTACGACTCACTGCTCTGCGCCGCATCCTGCAGGGCGGCTTTTCC
GAACACTATTTCCAGGGTAACCGTTCCGTTCTCAACAGCCTTCCCGTCATGATGCGCATGGCAAATCAGAATTAT
GGGTCGGTGGATCGCCAAAGTGCACGCAAGGCAGCCAAGATGCGCAACTCGCGTCGCTGGACTGCTCCCCAATCC
GATGACGACGAGTAA
Transcript >Pro_DTO377G3_2|g6873.t1
ATGCCCGATCTACGTCGCCAGATCTTCGAGAGCGGCAAGACTGTCTCACGAAAGGCAGCATCCCGTGAAGCATCC
CGCACCAACTCCCCCGCCAGTTCAAAGCAGACCTCGCGCCAGGGCTCTCGTAATGCCAGCAGAGCTCCTTCAGAT
GAAGAAGACTCGGGATTCCTCTCTGACGAAACATCTATGAGCATCGGATCTCTCGACGATGAGAACCCCGAACAA
GATAATCCCGATTGGGAACACGAACTCGGCGAGCGTATTCAAGAAATCCTTGATCGCAAGCGCAGCAGTGTCCAA
GGCCGCGAGGAGGCCCTGCAAGTATTCTGCCGCCTGACCAAATACCACTACACAGTAGAAGAAATCCACGGCGTT
GTTCCAGAACTACTGGCCGCATTTGAGCGAAGCGTCCGCACCGAGATTAGTGTGCGCGAAGCAACCCTTGGCTTG
CGCGCTATCGAGTTGCTTGTCATCTCAGCTTTCGACACCACCGTTTACGAAAACACCGAGTCCTTGCTCACCCGT
ACCGTTCGTGACTCTGCTTCCCCTCTTGTCAAGGCAGCAGCTATTCACTGCCTTGGGGCGTGTACTATCTTCGGA
GGTGCCGGTGAAGATGGCATTCTTGAACAGATGAGTTTCCTCCTGGACATCATCGCCTCGGATGGCCAATCCGTC
GATGCCACAGACGACCCCACCATTGTTACTGCCGCGCTCCAGCAGTGGGGATTCCTCGCCACCGAAGTCGACGAT
TTTGAAGAAGAAAGCGAGGAAGCAGTCCAGATCTTCATGGATCAGCTCGACAGCTCCGATTCCAACGTGCAAATT
GCAGCAGGCGAAAACATTGCCCTACTCTATGAGAAGAGCTACAGTCCCCAAGAGGATGACGAAGACGAGGAGAGC
GCTGATTCAAACGATGACAGCGACGAGCATGAGCACGATTCCACATCCGGTCCCAAGCTCGTGAAAAGATACAAC
GCTTACCACAACACTCCCGAGCTGGAGAGCCAACTTCAGAACCTGGCCACCGTCCACGGCAAGCAGATAAGCAAG
CGCGACAAGAAGTCCCTCCACAGCAACTTCGCCTCGATCCTCACCACTGTCGAGAACCCAGGCCGCGGTCCTCGT
TACAACACCGCCATCGACCAGAACACCAACCGTCATTACGGCAGCACTCTCACTGTCAAGATCGGCCGCCATGGA
GTCATGACTATCGACCGCTGGTGGAAGTGGGTACGACTCACTGCTCTGCGCCGCATCCTGCAGGGCGGCTTTTCC
GAACACTATTTCCAGGGTAACCGTTCCGTTCTCAACAGCCTTCCCGTCATGATGCGCATGGCAAATCAGAATTAT
GGGTCGGTGGATCGCCAAAGTGCACGCAAGGCAGCCAAGATGCGCAACTCGCGTCGCTGGACTGCTCCCCAATCC
GATGACGACGAGTAA
Gene >Pro_DTO377G3_2|g6873.t1
ATGCCCGATCTACGTCGCCAGATCTTCGAGAGCGGCAAGACTGTCTCACGAAAGGCAGCATCCCGTGAAGCATCC
CGCACCAACTCCCCCGCCAGTTCAAAGCAGACCTCGCGCCAGGGCTCTCGTAATGCCAGCAGAGCTCCTTCAGAT
GAAGAAGACTCGGGATTCCTCTCTGACGAAACATCTATGAGGTAAGCTGATAGTATTCCTCTTGCGCTTTTCGTC
TGTTTTTTTTTTTTTGTATCTTCATATGGTCCCACTCTCGTGGCGGGATGATGTCACCAATGATGTCGGCAAGTT
TTACAATCAAGGCACTAACCAATTCGGGATAGCATCGGATCTCTCGACGATGAGAACCCCGAACAAGATAATCCC
GATTGGGAACACGAACTCGGCGAGCGTATTCAAGAAATCCTTGATCGCAAGCGCAGCAGTGTCCAAGGCCGCGAG
GAGGCCCTGCAAGTATTCTGCCGCCTGACCAAATACCACTACACAGTAGAAGAAATCCACGGCGTTGTTCCAGAA
CTACTGGCCGCATTTGAGCGAAGCGTCCGCACCGAGATTAGTGTGCGCGAAGCAACCCTTGGCTTGCGCGCTATC
GAGTTGCTTGTCATCTCAGCTTTCGACACCACCGTTTACGAAAACACCGAGTCCTTGCTCACCCGTACCGTTCGT
GACTCTGCTTCCCCTCTTGTCAAGGCAGCAGCTATTCACTGCCTTGGGGCGTGTACTATCTTCGGAGGTGCCGGT
GAAGATGGCATTCTTGAACAGATGAGTTTCCTCCTGGACATCATCGCCTCGGATGGCCAATCCGTCGATGCCACA
GACGACCCCACCATTGTTACTGCCGCGCTCCAGCAGTGGGGATTCCTCGCCACCGAAGTCGACGATTTTGAAGAA
GAAAGCGAGGAAGCAGTCCAGATCTTCATGGATCAGCTCGACAGCTCCGATTCCAACGTGCAAATTGCAGCAGGC
GAAAACATTGCCCTACTCTATGAGAAGAGCTACAGTCCCCAAGAGGATGACGAAGACGAGGAGAGCGCTGATTCA
AACGATGACAGCGACGAGCATGAGCACGATTCCACATCCGGTCCCAAGCTCGTGAAAAGATACAACGCTTACCAC
AACACTCCCGAGCTGGAGAGCCAACTTCAGAACCTGGCCACCGTCCACGGCAAGCAGATAAGCAAGCGCGACAAG
AAGTCCCTCCACAGCAACTTCGCCTCGATCCTCACCACTGTCGAGAACCCAGGCCGCGGTCCTCGTTACAACACC
GCCATCGACCAGAACACCAACCGTCATTACGGCAGCACTCTCACTGTCAAGATCGGCCGCCATGGAGTCATGACT
ATCGACCGCTGGTGGAAGTGGGTACGACTCACTGCTCTGCGCCGCATCCTGCAGGGCGGCTTTTCCGAACACTAT
TTCCAGGGTAACCGTTCCGTTCTCAACAGCCTTCCCGTCATGATGCGCATGGCAAATCAGAATTATGGGTCGGTG
GATCGCCAAAGTGCACGCAAGGCAGCCAAGATGCGCAACTCGCGTCGCTGGACTGCTCCCCAATCCGATGACGAC
GAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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