Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6858.t1
Gene name
Locationscaffold_19:204626..206067
Strand+
Gene length (bp)1441
Transcript length (bp)1278
Coding sequence length (bp)1278
Protein length (aa) 426

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain 2.2E-28 45 155
PF00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain 6.5E-25 271 418
PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain 1.6E-16 160 258
PF08028 Acyl-CoA_dh_2 Acyl-CoA dehydrogenase, C-terminal domain 7.7E-08 284 405

GO

GO Term Description Terminal node
GO:0055114 oxidation-reduction process Yes
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0008152 metabolic process No
GO:0048037 cofactor binding No
GO:0050662 coenzyme binding No
GO:0003824 catalytic activity No
GO:0016491 oxidoreductase activity No
GO:1901265 nucleoside phosphate binding No
GO:1901363 heterocyclic compound binding No
GO:0000166 nucleotide binding No
GO:0043168 anion binding No
GO:0036094 small molecule binding No
GO:0097159 organic cyclic compound binding No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6858.t1
MMNRSLLRAAARSIQAGPTSVAGRRYASSAVFNWEDPLVAADLLTEEELAIQETARQYCQDKLAPRVLEAYRNEN
YDRRILEEMGDLGLLGASIEGYGCAGVSTVASGLITKEVERVDSGYRSGMSVQSSLAMTGIYEFGTEEQKQRFLP
SLAKGTIAGCFGLTEPNHGSDPGSMETVAREHPTQKGVYLLTGSKTWITNSPIADIALVWAKLESTGKIRGFIVE
RKRATPGSYETPAIKNKTALRASVTGMIHMDNCPVPAENMLPDVEGLKGPFTCLNSARLGIAFGAMGALEDCLAR
AREYSLERKQFKGNPLAKYQLIQMKLANAATDAAYGTLAAIQVARLKDAGKATPEMISMIKRQNCDRALANSRTL
QEIFGGNAASDEYHIGRHVANLFVVQTYEGQSDIHALILGRAITGKQAFV*
Coding >Pro_DTO377G3_2|g6858.t1
ATGATGAACCGATCTCTTCTTCGCGCAGCTGCGCGCTCAATCCAGGCTGGTCCTACCTCCGTGGCAGGCCGCCGG
TACGCCTCCTCGGCCGTCTTCAATTGGGAGGATCCCCTCGTCGCAGCGGACCTGCTCACAGAGGAGGAATTGGCA
ATTCAGGAGACAGCACGCCAATACTGCCAGGATAAGCTTGCACCCCGCGTTTTGGAGGCCTACCGCAACGAGAAC
TACGACCGCCGAATCCTAGAAGAGATGGGCGACCTCGGCCTCCTCGGAGCTTCAATTGAAGGATATGGATGCGCG
GGTGTCAGCACCGTGGCATCGGGCCTCATCACCAAGGAAGTTGAGCGCGTGGACTCTGGATACCGATCAGGCATG
TCAGTTCAGAGCTCGCTAGCCATGACCGGTATCTACGAGTTCGGCACAGAAGAGCAAAAGCAGCGCTTCCTGCCT
AGCCTCGCTAAGGGCACAATCGCCGGCTGCTTCGGTCTGACAGAGCCCAACCACGGCTCCGACCCTGGGTCCATG
GAAACCGTGGCGCGGGAGCACCCCACGCAGAAGGGCGTGTACCTGCTCACCGGCAGCAAGACATGGATCACGAAC
TCGCCCATCGCTGACATCGCGCTCGTATGGGCTAAGCTTGAGTCTACTGGGAAGATCCGTGGATTTATCGTGGAG
CGTAAGCGTGCGACGCCCGGGTCGTACGAGACCCCCGCTATCAAGAATAAGACTGCCCTGCGTGCTTCCGTCACT
GGTATGATCCATATGGATAACTGCCCCGTACCGGCGGAGAATATGCTGCCCGATGTCGAAGGTCTCAAGGGTCCC
TTTACATGCTTGAACAGTGCCCGTTTGGGAATTGCCTTTGGTGCCATGGGTGCCCTGGAGGATTGTCTTGCCCGT
GCGCGCGAGTACAGTCTGGAGCGCAAGCAGTTCAAGGGCAACCCGCTTGCCAAGTACCAGCTTATTCAGATGAAG
TTGGCTAACGCTGCTACGGATGCTGCTTACGGAACCCTGGCGGCGATCCAGGTGGCTCGTCTTAAGGATGCTGGC
AAGGCTACGCCTGAGATGATCTCGATGATCAAGCGTCAGAACTGTGACCGTGCTCTGGCTAATTCCAGAACTCTG
CAGGAAATCTTCGGTGGCAACGCTGCCAGCGACGAGTATCATATCGGCCGCCATGTGGCCAACCTGTTTGTGGTG
CAGACCTACGAAGGTCAGAGCGATATCCATGCTTTGATCCTGGGCCGTGCCATTACAGGCAAGCAGGCCTTTGTC
TGA
Transcript >Pro_DTO377G3_2|g6858.t1
ATGATGAACCGATCTCTTCTTCGCGCAGCTGCGCGCTCAATCCAGGCTGGTCCTACCTCCGTGGCAGGCCGCCGG
TACGCCTCCTCGGCCGTCTTCAATTGGGAGGATCCCCTCGTCGCAGCGGACCTGCTCACAGAGGAGGAATTGGCA
ATTCAGGAGACAGCACGCCAATACTGCCAGGATAAGCTTGCACCCCGCGTTTTGGAGGCCTACCGCAACGAGAAC
TACGACCGCCGAATCCTAGAAGAGATGGGCGACCTCGGCCTCCTCGGAGCTTCAATTGAAGGATATGGATGCGCG
GGTGTCAGCACCGTGGCATCGGGCCTCATCACCAAGGAAGTTGAGCGCGTGGACTCTGGATACCGATCAGGCATG
TCAGTTCAGAGCTCGCTAGCCATGACCGGTATCTACGAGTTCGGCACAGAAGAGCAAAAGCAGCGCTTCCTGCCT
AGCCTCGCTAAGGGCACAATCGCCGGCTGCTTCGGTCTGACAGAGCCCAACCACGGCTCCGACCCTGGGTCCATG
GAAACCGTGGCGCGGGAGCACCCCACGCAGAAGGGCGTGTACCTGCTCACCGGCAGCAAGACATGGATCACGAAC
TCGCCCATCGCTGACATCGCGCTCGTATGGGCTAAGCTTGAGTCTACTGGGAAGATCCGTGGATTTATCGTGGAG
CGTAAGCGTGCGACGCCCGGGTCGTACGAGACCCCCGCTATCAAGAATAAGACTGCCCTGCGTGCTTCCGTCACT
GGTATGATCCATATGGATAACTGCCCCGTACCGGCGGAGAATATGCTGCCCGATGTCGAAGGTCTCAAGGGTCCC
TTTACATGCTTGAACAGTGCCCGTTTGGGAATTGCCTTTGGTGCCATGGGTGCCCTGGAGGATTGTCTTGCCCGT
GCGCGCGAGTACAGTCTGGAGCGCAAGCAGTTCAAGGGCAACCCGCTTGCCAAGTACCAGCTTATTCAGATGAAG
TTGGCTAACGCTGCTACGGATGCTGCTTACGGAACCCTGGCGGCGATCCAGGTGGCTCGTCTTAAGGATGCTGGC
AAGGCTACGCCTGAGATGATCTCGATGATCAAGCGTCAGAACTGTGACCGTGCTCTGGCTAATTCCAGAACTCTG
CAGGAAATCTTCGGTGGCAACGCTGCCAGCGACGAGTATCATATCGGCCGCCATGTGGCCAACCTGTTTGTGGTG
CAGACCTACGAAGGTCAGAGCGATATCCATGCTTTGATCCTGGGCCGTGCCATTACAGGCAAGCAGGCCTTTGTC
TGA
Gene >Pro_DTO377G3_2|g6858.t1
ATGATGAACCGATCTCTTCTTCGCGCAGCTGCGCGCTCAATCCAGGCTGGTCCTACCTCCGTGGCAGGCCGCCGG
TACGCCTCCTCGGCCGTCTTCAATTGGGAGGATCCCCTCGTCGCAGCGGACCTGCTCACAGAGGAGGAATTGGCA
ATTCAGGAGACAGCACGCCAATACTGCCAGGATAAGCTTGCACCCCGCGTTTTGGGTATGTTTAATTCGCTTGCT
TCTGTGAAATGATGGACTGACGTCAGTGACCTCCTTGCAGAGGCCTACCGCAACGAGAACTACGACCGCCGAATC
CTAGAAGAGATGGGCGACCTCGGCCTCCTCGGAGCTTCAATTGAAGGATATGGATGCGCGGGTGTCAGCACCGTG
GCATCGGGCCTCATCACCAAGGAAGTTGAGCGCGTGGACTCTGGATACCGATCAGGCATGTCAGTTCAGAGCTCG
CTAGCCATGACCGGTATCTACGAGTTCGGCACAGAAGAGCAAAAGCAGCGCTTCCTGCCTAGCCTCGCTAAGGGC
ACAATCGCCGGCTGCTTCGGTCTGACAGAGCCCAACCACGGCTCCGACCCTGGGTCCATGGAAACCGTGGCGCGG
GAGCACCCCACGCAGAAGGGCGTGTACCTGCTCACCGGCAGCAAGACATGGATCACGAACTCGCCCATCGCTGAC
ATCGCGCTCGTATGGGCTAAGCTTGAGTCTACTGGGAAGATCCGTGGATTTATCGTGGAGCGTAAGCGTGCGACG
CCCGGGTCGTACGAGACCCCCGCTATCAAGAATAAGACTGCCCTGCGTGCTTCCGTCACTGGTATGATCCATATG
GATAACTGCCCCGTACCGGCGGAGAATATGCTGCCCGATGTCGAAGGTCTCAAGGGTCCCTTTACATGCTTGAAC
AGTGCCCGTTTGGGAATTGCCTTTGGTGCCATGGGTGCCCTGGAGGATTGTCTTGCCCGTGCGCGCGAGTACAGT
CTGGAGCGCAAGCAGTTCAAGGGCAACCCGCTTGCCAAGTACCAGCTTATTCAGATGAAGTTGGCTAACGCTGCT
ACGGATGCTGCTTACGGAACCCTGGCGGCGATCCAGGTGGCTCGTCTTAAGGATGCTGGCAAGGCTACGCCTGAG
ATGATCTCGATGATCAAGCGTCAGAACTGTGACCGTGCTCTGGCTAATTCCAGAACGTAGGTTTCTCTGTCTTTT
ATTTTTGGGTTGCTTTACTGACATAGTATTAGTCTGCAGGAAATCTTCGGTGGCAACGCTGCCAGCGACGAGTAT
CATATCGGCCGCCATGTGGCCAACCTGTTTGTGGTGCAGACCTACGAAGGTCAGAGCGATATCCATGGTAAGTCA
ACCCTGCCTGATTGTGTTGGGCTGAGGCTAATGCATGTTTCAAGCTTTGATCCTGGGCCGTGCCATTACAGGCAA
GCAGGCCTTTGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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