© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g6833.t1 |
| Gene name | |
| Location | scaffold_19:131019..134054 |
| Strand | + |
| Gene length (bp) | 3035 |
| Transcript length (bp) | 2814 |
| Coding sequence length (bp) | 2814 |
| Protein length (aa) | 938 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02366 | PMT | Dolichyl-phosphate-mannose-protein mannosyltransferase | 3.0E-82 | 62 | 311 |
| PF16192 | PMT_4TMC | C-terminal four TMM region of protein-O-mannosyltransferase | 7.4E-68 | 558 | 756 |
| PF02815 | MIR | MIR domain | 8.4E-45 | 358 | 534 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0000030 | mannosyltransferase activity | Yes |
| GO:0006493 | protein O-linked glycosylation | Yes |
| GO:0008152 | metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0070085 | glycosylation | No |
| GO:0016758 | hexosyltransferase activity | No |
| GO:0019538 | protein metabolic process | No |
| GO:0016757 | glycosyltransferase activity | No |
| GO:0008150 | biological_process | No |
| GO:0036211 | protein modification process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0005575 | cellular_component | No |
| GO:0016740 | transferase activity | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0043413 | macromolecule glycosylation | No |
| GO:0043412 | macromolecule modification | No |
| GO:0003674 | molecular_function | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0006486 | protein glycosylation | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 29 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 100 | 122 | 22 |
| 2 | 142 | 164 | 22 |
| 3 | 193 | 215 | 22 |
| 4 | 230 | 252 | 22 |
| 5 | 289 | 311 | 22 |
| 6 | 612 | 634 | 22 |
| 7 | 655 | 677 | 22 |
| 8 | 717 | 739 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g6833.t1 MGQKAQDTLAVRPQSRGRRSPSRSPKPKNRKPLAVPQTYASEGVKNNDIFKLPGSDYRLIVLVTLIAAAVRLFRI YQPTSVVFDEVHFGGFASKYIKGKFFMDVHPPLAKLLLTLAGWLAGFDGNFDFKDIGKDYLEPGVPYVAMRMLPA ILGVLTVPLMFLTLKVTGCRTSTSVLGAGLVIFDNALVTQSRLILLDSPLIFFTALTALAFSCFTNQQELGPAYA FRGPWWFWLVCTGLSLGATLSVKWVGLFTMAWVGSLTALQLWVLLGDSKNVTPRLWFKHFFSRVFCLIVIPLGFY MAMFAIHFTCLVNPGEGDGFMSSEFQATLNSKSMQDVPADVSFGSRVSLRHLNTQGGYLHSHPHMYPTGSKQQQI TLYPHKDENNEFLLENSTQPLGPYGEVEGPFAWDNLTAPGFIEDGSIIRLYHVITHRRIHSHDERPPVTEADWQY EVSAYGYEGFPGDANDLWRVEIVKSMSETPESKKRLRTIQSKFKLVHVMTGCVLFSHKVKLPDWGYEQQEVTCAK GGTLPNSIWYIESNQHPAMAPDAERVNYRNPGFLGKFWELQKVMWTTNAGLVESHAWDSRPPSWPTLLRGINFWG KDNRQIYLLGNPLIWWSTTLAIGIYFVFKALSIVRWQRSCDDYKHTSFKRFDYEVGTSVLGWFFHYFPFYLMARQ LFLHHYLPALYFAIMVFCQEFDFLTNRIKSLGLASKPLIGKALMAVFLGLSVVVFTLYAPLVYGNPWTRDACNQV KLLGSWDFDCNTFHTDLSQYITQYVPSLSPVAASTTAAQAPPPPPPVQAQEPAPAPAGEAVQESDPAAVTAPKLK GSVARVEYRDQNGKVLDENLVASLRAEGKVKFETRYEAGHPLENAHEVPIVDGQLAPPHPDVQGQNPETASAPED IVPPESPASVADGNERSVEQPSSMEAKPASEGNDATS* |
| Coding | >Pro_DTO377G3_2|g6833.t1 ATGGGCCAGAAAGCGCAAGACACGCTGGCCGTGCGGCCACAGAGCCGTGGTAGGCGCTCGCCCAGTCGGTCGCCT AAGCCCAAGAACCGCAAGCCTTTGGCGGTGCCTCAGACGTATGCCTCGGAAGGAGTGAAGAACAATGACATCTTC AAACTCCCCGGCTCGGACTATAGACTTATTGTACTGGTAACTCTGATCGCCGCAGCTGTTCGCCTATTCAGAATC TATCAGCCCACCAGCGTGGTCTTCGATGAAGTCCACTTCGGTGGATTTGCTTCCAAATATATCAAGGGAAAATTC TTCATGGACGTGCACCCCCCGCTAGCTAAACTGCTGCTTACGCTGGCTGGTTGGTTGGCTGGGTTCGACGGAAAC TTCGACTTCAAGGATATTGGCAAGGATTATTTGGAGCCCGGTGTTCCTTATGTGGCCATGCGCATGCTTCCAGCT ATTCTGGGTGTCCTGACTGTCCCATTGATGTTCCTCACCCTCAAAGTTACCGGGTGCCGAACTTCAACTTCAGTC CTAGGTGCTGGTCTTGTTATCTTTGACAACGCTTTGGTCACTCAGTCCCGTCTGATTCTGCTCGACTCCCCACTG ATTTTCTTTACCGCTCTGACAGCTTTGGCCTTCAGCTGCTTCACCAACCAACAAGAGCTTGGACCGGCCTATGCC TTCCGTGGCCCGTGGTGGTTCTGGCTCGTGTGTACCGGTCTTTCTCTTGGCGCAACCCTGAGCGTGAAGTGGGTT GGCCTCTTCACTATGGCTTGGGTTGGATCTCTCACGGCTCTCCAGTTGTGGGTACTGTTGGGCGATTCTAAAAAT GTCACACCGCGTCTGTGGTTCAAGCATTTCTTCTCTCGGGTATTCTGTCTCATTGTCATTCCTCTCGGTTTCTAC ATGGCCATGTTTGCCATCCACTTTACATGCTTGGTTAACCCCGGAGAAGGTGACGGCTTCATGTCATCGGAATTC CAGGCAACTTTGAACTCAAAGTCTATGCAAGATGTTCCCGCAGATGTCTCATTTGGATCCCGGGTCAGCCTCCGC CACCTGAACACACAGGGCGGCTACCTGCACTCCCACCCTCATATGTACCCAACAGGTAGCAAGCAGCAGCAGATC ACGCTCTACCCCCACAAGGATGAGAACAACGAGTTCCTCCTGGAGAACTCGACTCAGCCTCTAGGACCCTATGGA GAGGTCGAGGGCCCATTCGCCTGGGATAACCTGACTGCTCCTGGTTTCATTGAGGATGGTTCGATTATCAGACTT TACCATGTGATCACTCACCGAAGAATTCACTCGCATGACGAGCGCCCTCCGGTGACCGAGGCCGACTGGCAGTAT GAGGTCTCTGCCTATGGATACGAAGGCTTCCCTGGTGATGCCAACGACTTATGGAGGGTTGAGATTGTGAAGTCC ATGTCCGAGACCCCCGAGTCTAAGAAGCGCTTGCGGACTATTCAGTCCAAGTTCAAGTTGGTGCACGTCATGACT GGTTGTGTCCTGTTCTCCCACAAGGTCAAGCTTCCGGACTGGGGATACGAGCAGCAGGAAGTGACTTGCGCCAAG GGTGGTACTCTTCCCAATAGCATTTGGTATATTGAGTCCAACCAGCATCCCGCTATGGCCCCGGACGCCGAGCGA GTGAACTACCGGAATCCCGGATTCTTGGGCAAGTTCTGGGAATTGCAGAAGGTCATGTGGACCACGAACGCAGGC TTAGTTGAGTCCCATGCCTGGGATTCTCGTCCGCCCTCCTGGCCTACCCTCCTTCGTGGCATCAACTTCTGGGGC AAAGACAACCGCCAAATTTACCTCCTCGGAAACCCTCTTATCTGGTGGTCGACCACTCTGGCTATCGGAATCTAT TTCGTCTTCAAGGCTCTCTCCATTGTTCGGTGGCAACGAAGTTGTGATGACTACAAGCACACTTCGTTCAAGCGC TTTGACTACGAGGTTGGCACCAGCGTTTTGGGTTGGTTCTTCCACTATTTCCCATTCTACCTCATGGCCCGCCAG CTCTTCTTGCATCACTACCTCCCTGCCCTTTACTTCGCCATTATGGTCTTTTGCCAAGAATTTGACTTCCTTACA AACCGCATTAAGAGCCTGGGGCTTGCGTCGAAGCCCTTGATCGGAAAGGCTCTGATGGCAGTCTTCCTGGGACTT AGCGTTGTTGTATTCACGCTCTACGCCCCACTCGTGTATGGTAACCCCTGGACTAGGGATGCCTGCAATCAGGTG AAGCTGCTTGGATCCTGGGATTTCGACTGTAACACATTCCACACCGACTTGAGCCAGTACATCACTCAGTACGTG CCGAGCCTATCCCCCGTGGCTGCCTCTACAACCGCAGCTCAAGCACCACCCCCACCGCCACCAGTCCAGGCTCAA GAGCCTGCGCCTGCGCCTGCAGGTGAGGCTGTTCAAGAATCAGACCCAGCGGCCGTCACCGCGCCCAAGCTTAAG GGCTCTGTGGCGCGCGTTGAGTACCGCGACCAAAACGGCAAAGTTCTTGACGAGAACCTTGTAGCCTCGCTCCGA GCAGAAGGTAAAGTCAAGTTCGAGACTCGCTATGAGGCTGGTCATCCTCTGGAGAATGCCCATGAGGTTCCTATC GTCGATGGCCAGCTCGCTCCCCCGCACCCGGATGTGCAGGGCCAGAATCCCGAGACTGCCAGCGCGCCCGAAGAC ATCGTGCCCCCTGAGAGCCCCGCATCTGTGGCCGATGGTAACGAGCGCTCCGTCGAGCAGCCAAGCTCCATGGAA GCCAAACCTGCCAGCGAGGGCAATGATGCGACTAGCTAG |
| Transcript | >Pro_DTO377G3_2|g6833.t1 ATGGGCCAGAAAGCGCAAGACACGCTGGCCGTGCGGCCACAGAGCCGTGGTAGGCGCTCGCCCAGTCGGTCGCCT AAGCCCAAGAACCGCAAGCCTTTGGCGGTGCCTCAGACGTATGCCTCGGAAGGAGTGAAGAACAATGACATCTTC AAACTCCCCGGCTCGGACTATAGACTTATTGTACTGGTAACTCTGATCGCCGCAGCTGTTCGCCTATTCAGAATC TATCAGCCCACCAGCGTGGTCTTCGATGAAGTCCACTTCGGTGGATTTGCTTCCAAATATATCAAGGGAAAATTC TTCATGGACGTGCACCCCCCGCTAGCTAAACTGCTGCTTACGCTGGCTGGTTGGTTGGCTGGGTTCGACGGAAAC TTCGACTTCAAGGATATTGGCAAGGATTATTTGGAGCCCGGTGTTCCTTATGTGGCCATGCGCATGCTTCCAGCT ATTCTGGGTGTCCTGACTGTCCCATTGATGTTCCTCACCCTCAAAGTTACCGGGTGCCGAACTTCAACTTCAGTC CTAGGTGCTGGTCTTGTTATCTTTGACAACGCTTTGGTCACTCAGTCCCGTCTGATTCTGCTCGACTCCCCACTG ATTTTCTTTACCGCTCTGACAGCTTTGGCCTTCAGCTGCTTCACCAACCAACAAGAGCTTGGACCGGCCTATGCC TTCCGTGGCCCGTGGTGGTTCTGGCTCGTGTGTACCGGTCTTTCTCTTGGCGCAACCCTGAGCGTGAAGTGGGTT GGCCTCTTCACTATGGCTTGGGTTGGATCTCTCACGGCTCTCCAGTTGTGGGTACTGTTGGGCGATTCTAAAAAT GTCACACCGCGTCTGTGGTTCAAGCATTTCTTCTCTCGGGTATTCTGTCTCATTGTCATTCCTCTCGGTTTCTAC ATGGCCATGTTTGCCATCCACTTTACATGCTTGGTTAACCCCGGAGAAGGTGACGGCTTCATGTCATCGGAATTC CAGGCAACTTTGAACTCAAAGTCTATGCAAGATGTTCCCGCAGATGTCTCATTTGGATCCCGGGTCAGCCTCCGC CACCTGAACACACAGGGCGGCTACCTGCACTCCCACCCTCATATGTACCCAACAGGTAGCAAGCAGCAGCAGATC ACGCTCTACCCCCACAAGGATGAGAACAACGAGTTCCTCCTGGAGAACTCGACTCAGCCTCTAGGACCCTATGGA GAGGTCGAGGGCCCATTCGCCTGGGATAACCTGACTGCTCCTGGTTTCATTGAGGATGGTTCGATTATCAGACTT TACCATGTGATCACTCACCGAAGAATTCACTCGCATGACGAGCGCCCTCCGGTGACCGAGGCCGACTGGCAGTAT GAGGTCTCTGCCTATGGATACGAAGGCTTCCCTGGTGATGCCAACGACTTATGGAGGGTTGAGATTGTGAAGTCC ATGTCCGAGACCCCCGAGTCTAAGAAGCGCTTGCGGACTATTCAGTCCAAGTTCAAGTTGGTGCACGTCATGACT GGTTGTGTCCTGTTCTCCCACAAGGTCAAGCTTCCGGACTGGGGATACGAGCAGCAGGAAGTGACTTGCGCCAAG GGTGGTACTCTTCCCAATAGCATTTGGTATATTGAGTCCAACCAGCATCCCGCTATGGCCCCGGACGCCGAGCGA GTGAACTACCGGAATCCCGGATTCTTGGGCAAGTTCTGGGAATTGCAGAAGGTCATGTGGACCACGAACGCAGGC TTAGTTGAGTCCCATGCCTGGGATTCTCGTCCGCCCTCCTGGCCTACCCTCCTTCGTGGCATCAACTTCTGGGGC AAAGACAACCGCCAAATTTACCTCCTCGGAAACCCTCTTATCTGGTGGTCGACCACTCTGGCTATCGGAATCTAT TTCGTCTTCAAGGCTCTCTCCATTGTTCGGTGGCAACGAAGTTGTGATGACTACAAGCACACTTCGTTCAAGCGC TTTGACTACGAGGTTGGCACCAGCGTTTTGGGTTGGTTCTTCCACTATTTCCCATTCTACCTCATGGCCCGCCAG CTCTTCTTGCATCACTACCTCCCTGCCCTTTACTTCGCCATTATGGTCTTTTGCCAAGAATTTGACTTCCTTACA AACCGCATTAAGAGCCTGGGGCTTGCGTCGAAGCCCTTGATCGGAAAGGCTCTGATGGCAGTCTTCCTGGGACTT AGCGTTGTTGTATTCACGCTCTACGCCCCACTCGTGTATGGTAACCCCTGGACTAGGGATGCCTGCAATCAGGTG AAGCTGCTTGGATCCTGGGATTTCGACTGTAACACATTCCACACCGACTTGAGCCAGTACATCACTCAGTACGTG CCGAGCCTATCCCCCGTGGCTGCCTCTACAACCGCAGCTCAAGCACCACCCCCACCGCCACCAGTCCAGGCTCAA GAGCCTGCGCCTGCGCCTGCAGGTGAGGCTGTTCAAGAATCAGACCCAGCGGCCGTCACCGCGCCCAAGCTTAAG GGCTCTGTGGCGCGCGTTGAGTACCGCGACCAAAACGGCAAAGTTCTTGACGAGAACCTTGTAGCCTCGCTCCGA GCAGAAGGTAAAGTCAAGTTCGAGACTCGCTATGAGGCTGGTCATCCTCTGGAGAATGCCCATGAGGTTCCTATC GTCGATGGCCAGCTCGCTCCCCCGCACCCGGATGTGCAGGGCCAGAATCCCGAGACTGCCAGCGCGCCCGAAGAC ATCGTGCCCCCTGAGAGCCCCGCATCTGTGGCCGATGGTAACGAGCGCTCCGTCGAGCAGCCAAGCTCCATGGAA GCCAAACCTGCCAGCGAGGGCAATGATGCGACTAGCTAG |
| Gene | >Pro_DTO377G3_2|g6833.t1 ATGGGCCAGAAAGCGCAAGACACGCTGGCCGTGCGGCCACAGAGCCGTGGTAGGCGCTCGCCCAGTCGGTCGCCT AAGCCCAAGAACCGCAAGCCTTTGGCGGTGCCTCAGACGTATGCCTCGGAAGGAGTGAAGAACAATGACATCTTC AAACTCCCCGGCTCGGACTATAGACTTATTGTACTGGTAACTCTGATCGCCGCAGCTGTTCGCCTATTCAGAATC TATCAGCCCACCAGCGTGGTCTTCGATGAAGTCCAGTACGTTCCGCCCAAGCTTGTGTTTTCAATCGGAATAAAA ACAAACAGAGACTAATGATTACGCGTGAACAGCTTCGGTGGATTTGCTTCCAAATATATCAAGGGAAAATTCTTC ATGGACGTGCACCCCCCGCTAGCTAAACTGCTGCTTACGCTGGCTGGTTGGTTGGCTGGGTTCGACGGAAACTTC GACTTCAAGGATATTGGCAAGGATTATTTGGAGCCCGGTGTTCCTTATGTGGCCATGCGCATGCTTCCAGCTATT CTGGGTGTCCTGACTGTCCCATTGATGTTCCTCACCCTCAAAGTTACCGGGTGCCGAACTTCAACTTCAGTCCTA GGTGCTGGTCTTGTTATCTTTGACAACGCTTTGGTCACTCAGTCCCGTCTGATTCTGCTCGACTCCCCACTGATT TTCTTTACCGCTCTGACAGCTTTGGCCTTCAGCTGCTTCACCAACCAACAAGAGCTTGGACCGGCCTATGCCTTC CGTGGCCCGTGGTGGTTCTGGCTCGTGTGTACCGGTCTTTCTCTTGGCGCAACCCTGAGCGTGAAGTGGGTTGGC CTCTTCACTATGGCTTGGGTTGGATCTCTCACGGCTCTCCAGTTGTGGGTACTGTTGGGCGATTCTAAAAATGTC ACACCGGTATGGGTTTCCAAATTCAGATCAAGCCGTGTTCTATGCTAACAGTAGGATTCTTACAGCGTCTGTGGT TCAAGCATTTCTTCTCTCGGGTATTCTGTCTCATTGTCATTCCTCTCGGTTTCTACATGGCCATGTTTGCCATCC ACTTTACATGCTTGGTTAACCCCGGAGAAGGTGACGGCTTCATGTCATCGGAATTCCAGGCAACTTTGAACTCAA AGTCTATGCAAGATGTTCCCGCAGATGTCTCATTTGGATCCCGGGTCAGCCTCCGCCACCTGAACACACAGGGCG GCTACCTGCACTCCCACCCTCATATGTACCCAACAGGTAGCAAGCAGCAGCAGATCACGCTCTACCCCCACAAGG ATGAGAACAACGAGTTCCTCCTGGAGAACTCGACTCAGCCTCTAGGACCCTATGGAGAGGTCGAGGGCCCATTCG CCTGGGATAACCTGACTGCTCCTGGTTTCATTGAGGATGGTTCGATTATCAGACTTTACCATGTGATCACTCACC GAAGAATTCACTCGCATGACGAGCGCCCTCCGGTGACCGAGGCCGACTGGCAGTATGAGGTCTCTGCCTATGGAT ACGAAGGCTTCCCTGGTGATGCCAACGACTTATGGAGGGTTGAGATTGTGAAGTCCATGTCCGAGACCCCCGAGT CTAAGAAGCGCTTGCGGACTATTCAGTCCAAGTTCAAGTTGGTGCACGTCATGACTGGTTGTGTCCTGTTCTCCC ACAAGGTCAAGCTTCCGGACTGGGGATACGAGCAGCAGGAAGTGACTTGCGCCAAGGGTGGTACTCTTCCCAATA GCATTTGGTATATTGAGTCCAACCAGCATCCCGCTATGGCCCCGGACGCCGAGCGAGTGAACTACCGGAATCCCG GATTCTTGGGCAAGTTCTGGGAATTGCAGAAGGTCATGTGGACCACGAACGCAGGCTTAGTTGAGTCCCATGCCT GGGATTCTCGTCCGCCCTCCTGGCCTACCCTCCTTCGTGGCATCAACTTCTGGGGCAAAGACAACCGCCAAATTT ACCTCCTCGGAAACCCTCTTATCTGGTGGTCGACCACTCTGGCTATCGGAATCTATTTCGTCTTCAAGGCTCTCT CCATTGTTCGGTGGCAACGAAGTTGTGATGACTACAAGCACACTTCGTTCAAGCGCTTTGACTACGAGGTTGGCA CCAGCGTTTTGGGTTGGTTCTTCCACTATTTCCCATTCTACCTCATGGCCCGCCAGCTCTTCTTGCATCACTACC TCCCTGCCCTTTACTTCGCCATTATGGTCTTTTGCCAAGAATTTGACTTCCTTACAAACCGCATTAAGAGCCTGG GGCTTGCGTCGAAGCCCTTGATCGGAAAGGCTCTGATGGCAGTCTTCCTGGGACTTAGCGTTGTTGTATTCACGC TCTACGCCCCACTCGTGTATGGTAACCCCTGGACTAGGGATGCCTGCAATCAGGTGAAGCTGCTTGGATCCTGGG ATTTCGACTGTAACACATTCCACACCGACGTAAGTGTTCCGGAATGGAAACCTCCTCGACGAGGTTATTGAACGA ATCGACGAGATCACGACTGACATAGGCCTTTCGAACTCCACTAGTTGAGCCAGTACATCACTCAGTACGTGCCGA GCCTATCCCCCGTGGCTGCCTCTACAACCGCAGCTCAAGCACCACCCCCACCGCCACCAGTCCAGGCTCAAGAGC CTGCGCCTGCGCCTGCAGGTGAGGCTGTTCAAGAATCAGACCCAGCGGCCGTCACCGCGCCCAAGCTTAAGGGCT CTGTGGCGCGCGTTGAGTACCGCGACCAAAACGGCAAAGTTCTTGACGAGAACCTTGTAGCCTCGCTCCGAGCAG AAGGTAAAGTCAAGTTCGAGACTCGCTATGAGGCTGGTCATCCTCTGGAGAATGCCCATGAGGTTCCTATCGTCG ATGGCCAGCTCGCTCCCCCGCACCCGGATGTGCAGGGCCAGAATCCCGAGACTGCCAGCGCGCCCGAAGACATCG TGCCCCCTGAGAGCCCCGCATCTGTGGCCGATGGTAACGAGCGCTCCGTCGAGCAGCCAAGCTCCATGGAAGCCA AACCTGCCAGCGAGGGCAATGATGCGACTAGCTAG |