Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6832.t1
Gene name
Locationscaffold_19:128677..130225
Strand-
Gene length (bp)1548
Transcript length (bp)1548
Coding sequence length (bp)1548
Protein length (aa) 516

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12230 PRP21_like_P Pre-mRNA splicing factor PRP21 like protein 2.7E-55 205 457
PF01805 Surp Surp module 2.8E-16 32 83
PF01805 Surp Surp module 9.1E-18 128 179

GO

GO Term Description Terminal node
GO:0006396 RNA processing Yes
GO:0003723 RNA binding Yes
GO:0008152 metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0016070 RNA metabolic process No
GO:0008150 biological_process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0071704 organic substance metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0003676 nucleic acid binding No
GO:0044238 primary metabolic process No
GO:0005488 binding No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0003674 molecular_function No
GO:0006807 nitrogen compound metabolic process No
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0090304 nucleic acid metabolic process No
GO:0044237 cellular metabolic process No
GO:0009987 cellular process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 67 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6832.t1
MEPSNGTTPRPEGSEGVIKPPEGMVLPPKDIRKAIETTASYVVRHKGVFEDRIRERERNNYKFSFLNAGDAYEPY
YQWYIAEYRAGRVGPARAGEAVAAAEPEKPKGPPEPSPFHFSARMPIINAQDLEVVKLTAMFVAKRGKSFMTALA
QREARNSQFDFLRPQHSLYQFFTRLVDQYTILLRDEGIDDVTSATKRIEELQQSAKNKFHVMERAKQRAEWVKYQ
RQQKQEKEQQSEQERIEYAQIDWHDFVVVETIEFTEHDNHADLPPPTSANDLQSASLEQRASFSLNALRIDEAMP
NGLDEPVYYNAYPVRPAPMPVPQPAPQPAVAPYPAGPYPAAGQFTNPAEDQRIRERTQARDQAAAAQAAAQAPAG
QQPMRIRSDYVPRAQARRQQAQMGICPYCNQKVPSNELDEHIRIELLDPRWKEQRAKAEARSATTNLSTVDVVNN
LKRLASQRSDVFDPAPLDPEEEARRKRLSTGLDASAGPQNPNATPNPQSMNIEDQIRHIHQLAKK*
Coding >Pro_DTO377G3_2|g6832.t1
ATGGAGCCATCCAATGGAACTACACCTCGCCCTGAGGGGTCTGAGGGGGTTATCAAGCCTCCAGAGGGTATGGTT
CTTCCTCCCAAGGATATTCGCAAAGCCATCGAGACCACAGCAAGCTATGTCGTTCGCCATAAAGGTGTCTTCGAA
GACCGTATCCGCGAGAGGGAAAGGAACAACTACAAATTCTCTTTCCTGAATGCTGGAGATGCCTACGAGCCATAC
TATCAATGGTATATCGCCGAGTACAGAGCAGGTCGAGTCGGACCAGCACGAGCTGGCGAGGCTGTCGCCGCTGCG
GAACCCGAAAAGCCCAAAGGACCACCTGAACCATCCCCGTTCCACTTCTCTGCGCGCATGCCTATTATCAATGCG
CAGGATTTGGAGGTGGTGAAGCTCACAGCGATGTTTGTCGCGAAGCGGGGGAAGTCATTCATGACCGCGCTGGCG
CAGCGCGAGGCCAGAAATTCCCAGTTCGACTTCTTGCGCCCACAGCATAGTCTCTACCAATTCTTCACGCGTTTG
GTCGACCAATACACTATCTTGCTTCGCGACGAGGGTATCGACGACGTGACTTCAGCCACGAAGAGAATCGAAGAG
CTGCAACAAAGTGCAAAGAACAAATTCCACGTCATGGAGCGCGCTAAGCAGCGCGCAGAATGGGTGAAATACCAA
CGTCAACAGAAGCAAGAGAAGGAACAGCAAAGTGAACAGGAACGCATTGAGTACGCCCAGATCGACTGGCATGAC
TTCGTCGTGGTCGAGACTATTGAATTCACCGAGCACGACAACCACGCAGACTTGCCACCGCCGACCTCCGCCAAT
GACCTGCAGTCCGCCTCCCTCGAGCAGAGAGCGTCCTTTTCCCTCAACGCACTCCGTATCGATGAAGCGATGCCC
AATGGCCTTGACGAACCCGTCTACTACAACGCCTACCCAGTTCGACCAGCACCAATGCCCGTCCCTCAGCCCGCC
CCCCAGCCCGCAGTCGCGCCCTACCCTGCAGGCCCCTACCCCGCAGCCGGTCAGTTCACCAACCCTGCCGAAGAC
CAGCGCATCCGCGAGCGGACTCAGGCGCGCGACCAAGCCGCCGCCGCCCAGGCAGCAGCCCAAGCCCCCGCAGGC
CAACAGCCAATGCGCATCCGCTCAGACTACGTGCCCCGCGCTCAGGCCCGCCGTCAACAAGCCCAGATGGGGATC
TGCCCTTACTGCAACCAAAAAGTGCCCTCCAACGAGCTGGACGAGCACATCCGTATCGAGCTGCTCGACCCGCGC
TGGAAAGAACAGCGTGCCAAGGCCGAAGCCCGCAGTGCCACCACCAATCTGTCCACCGTCGACGTGGTCAACAAC
CTCAAGCGTCTTGCCAGCCAGCGCAGCGACGTCTTCGACCCTGCTCCCCTCGACCCCGAGGAGGAAGCTCGCCGC
AAGCGTCTGTCTACGGGTCTCGATGCCTCGGCTGGCCCACAGAACCCGAACGCCACTCCCAACCCCCAGAGCATG
AATATCGAAGACCAGATCAGACACATTCACCAGCTTGCCAAGAAATGA
Transcript >Pro_DTO377G3_2|g6832.t1
ATGGAGCCATCCAATGGAACTACACCTCGCCCTGAGGGGTCTGAGGGGGTTATCAAGCCTCCAGAGGGTATGGTT
CTTCCTCCCAAGGATATTCGCAAAGCCATCGAGACCACAGCAAGCTATGTCGTTCGCCATAAAGGTGTCTTCGAA
GACCGTATCCGCGAGAGGGAAAGGAACAACTACAAATTCTCTTTCCTGAATGCTGGAGATGCCTACGAGCCATAC
TATCAATGGTATATCGCCGAGTACAGAGCAGGTCGAGTCGGACCAGCACGAGCTGGCGAGGCTGTCGCCGCTGCG
GAACCCGAAAAGCCCAAAGGACCACCTGAACCATCCCCGTTCCACTTCTCTGCGCGCATGCCTATTATCAATGCG
CAGGATTTGGAGGTGGTGAAGCTCACAGCGATGTTTGTCGCGAAGCGGGGGAAGTCATTCATGACCGCGCTGGCG
CAGCGCGAGGCCAGAAATTCCCAGTTCGACTTCTTGCGCCCACAGCATAGTCTCTACCAATTCTTCACGCGTTTG
GTCGACCAATACACTATCTTGCTTCGCGACGAGGGTATCGACGACGTGACTTCAGCCACGAAGAGAATCGAAGAG
CTGCAACAAAGTGCAAAGAACAAATTCCACGTCATGGAGCGCGCTAAGCAGCGCGCAGAATGGGTGAAATACCAA
CGTCAACAGAAGCAAGAGAAGGAACAGCAAAGTGAACAGGAACGCATTGAGTACGCCCAGATCGACTGGCATGAC
TTCGTCGTGGTCGAGACTATTGAATTCACCGAGCACGACAACCACGCAGACTTGCCACCGCCGACCTCCGCCAAT
GACCTGCAGTCCGCCTCCCTCGAGCAGAGAGCGTCCTTTTCCCTCAACGCACTCCGTATCGATGAAGCGATGCCC
AATGGCCTTGACGAACCCGTCTACTACAACGCCTACCCAGTTCGACCAGCACCAATGCCCGTCCCTCAGCCCGCC
CCCCAGCCCGCAGTCGCGCCCTACCCTGCAGGCCCCTACCCCGCAGCCGGTCAGTTCACCAACCCTGCCGAAGAC
CAGCGCATCCGCGAGCGGACTCAGGCGCGCGACCAAGCCGCCGCCGCCCAGGCAGCAGCCCAAGCCCCCGCAGGC
CAACAGCCAATGCGCATCCGCTCAGACTACGTGCCCCGCGCTCAGGCCCGCCGTCAACAAGCCCAGATGGGGATC
TGCCCTTACTGCAACCAAAAAGTGCCCTCCAACGAGCTGGACGAGCACATCCGTATCGAGCTGCTCGACCCGCGC
TGGAAAGAACAGCGTGCCAAGGCCGAAGCCCGCAGTGCCACCACCAATCTGTCCACCGTCGACGTGGTCAACAAC
CTCAAGCGTCTTGCCAGCCAGCGCAGCGACGTCTTCGACCCTGCTCCCCTCGACCCCGAGGAGGAAGCTCGCCGC
AAGCGTCTGTCTACGGGTCTCGATGCCTCGGCTGGCCCACAGAACCCGAACGCCACTCCCAACCCCCAGAGCATG
AATATCGAAGACCAGATCAGACACATTCACCAGCTTGCCAAGAAATGA
Gene >Pro_DTO377G3_2|g6832.t1
ATGGAGCCATCCAATGGAACTACACCTCGCCCTGAGGGGTCTGAGGGGGTTATCAAGCCTCCAGAGGGTATGGTT
CTTCCTCCCAAGGATATTCGCAAAGCCATCGAGACCACAGCAAGCTATGTCGTTCGCCATAAAGGTGTCTTCGAA
GACCGTATCCGCGAGAGGGAAAGGAACAACTACAAATTCTCTTTCCTGAATGCTGGAGATGCCTACGAGCCATAC
TATCAATGGTATATCGCCGAGTACAGAGCAGGTCGAGTCGGACCAGCACGAGCTGGCGAGGCTGTCGCCGCTGCG
GAACCCGAAAAGCCCAAAGGACCACCTGAACCATCCCCGTTCCACTTCTCTGCGCGCATGCCTATTATCAATGCG
CAGGATTTGGAGGTGGTGAAGCTCACAGCGATGTTTGTCGCGAAGCGGGGGAAGTCATTCATGACCGCGCTGGCG
CAGCGCGAGGCCAGAAATTCCCAGTTCGACTTCTTGCGCCCACAGCATAGTCTCTACCAATTCTTCACGCGTTTG
GTCGACCAATACACTATCTTGCTTCGCGACGAGGGTATCGACGACGTGACTTCAGCCACGAAGAGAATCGAAGAG
CTGCAACAAAGTGCAAAGAACAAATTCCACGTCATGGAGCGCGCTAAGCAGCGCGCAGAATGGGTGAAATACCAA
CGTCAACAGAAGCAAGAGAAGGAACAGCAAAGTGAACAGGAACGCATTGAGTACGCCCAGATCGACTGGCATGAC
TTCGTCGTGGTCGAGACTATTGAATTCACCGAGCACGACAACCACGCAGACTTGCCACCGCCGACCTCCGCCAAT
GACCTGCAGTCCGCCTCCCTCGAGCAGAGAGCGTCCTTTTCCCTCAACGCACTCCGTATCGATGAAGCGATGCCC
AATGGCCTTGACGAACCCGTCTACTACAACGCCTACCCAGTTCGACCAGCACCAATGCCCGTCCCTCAGCCCGCC
CCCCAGCCCGCAGTCGCGCCCTACCCTGCAGGCCCCTACCCCGCAGCCGGTCAGTTCACCAACCCTGCCGAAGAC
CAGCGCATCCGCGAGCGGACTCAGGCGCGCGACCAAGCCGCCGCCGCCCAGGCAGCAGCCCAAGCCCCCGCAGGC
CAACAGCCAATGCGCATCCGCTCAGACTACGTGCCCCGCGCTCAGGCCCGCCGTCAACAAGCCCAGATGGGGATC
TGCCCTTACTGCAACCAAAAAGTGCCCTCCAACGAGCTGGACGAGCACATCCGTATCGAGCTGCTCGACCCGCGC
TGGAAAGAACAGCGTGCCAAGGCCGAAGCCCGCAGTGCCACCACCAATCTGTCCACCGTCGACGTGGTCAACAAC
CTCAAGCGTCTTGCCAGCCAGCGCAGCGACGTCTTCGACCCTGCTCCCCTCGACCCCGAGGAGGAAGCTCGCCGC
AAGCGTCTGTCTACGGGTCTCGATGCCTCGGCTGGCCCACAGAACCCGAACGCCACTCCCAACCCCCAGAGCATG
AATATCGAAGACCAGATCAGACACATTCACCAGCTTGCCAAGAAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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