Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6814.t1
Gene name
Locationscaffold_19:94699..95493
Strand+
Gene length (bp)794
Transcript length (bp)342
Coding sequence length (bp)342
Protein length (aa) 114

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01253 SUI1 Translation initiation factor SUI1 3.6E-29 26 101

GO

GO Term Description Terminal node
GO:0006413 translational initiation Yes
GO:0003743 translation initiation factor activity Yes
GO:0008150 biological_process No
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:0090079 translation regulator activity, nucleic acid binding No
GO:0008135 translation factor activity, RNA binding No
GO:0045182 translation regulator activity No
GO:0009987 cellular process No
GO:0044237 cellular metabolic process No
GO:0008152 metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0003676 nucleic acid binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6814.t1
MSIENLKTFDPFAEADEDTGETKQSQNYIHIRIQQRNGRKTLTTVQGLPKKFDQKKILKVIKKKFACNGTIVSDT
EMGEVIQLQGDQRKDVQEFLTDKEGLELDAKTIKVHGF*
Coding >Pro_DTO377G3_2|g6814.t1
ATGTCCATCGAAAACCTCAAGACCTTCGACCCCTTCGCCGAAGCCGACGAAGATACCGGCGAGACTAAGCAGTCT
CAGAACTATATTCACATACGGATTCAGCAACGCAATGGTCGCAAGACTCTGACCACTGTTCAGGGTCTTCCCAAG
AAGTTCGACCAGAAGAAAATTCTCAAGGTCATCAAGAAGAAGTTCGCTTGCAATGGCACCATCGTCTCTGACACC
GAGATGGGCGAGGTGATTCAGCTGCAAGGAGATCAGAGAAAGGATGTCCAGGAGTTCTTGACTGACAAGGAGGGG
CTCGAGCTTGATGCCAAGACCATCAAGGTCCACGGGTTCTAA
Transcript >Pro_DTO377G3_2|g6814.t1
ATGTCCATCGAAAACCTCAAGACCTTCGACCCCTTCGCCGAAGCCGACGAAGATACCGGCGAGACTAAGCAGTCT
CAGAACTATATTCACATACGGATTCAGCAACGCAATGGTCGCAAGACTCTGACCACTGTTCAGGGTCTTCCCAAG
AAGTTCGACCAGAAGAAAATTCTCAAGGTCATCAAGAAGAAGTTCGCTTGCAATGGCACCATCGTCTCTGACACC
GAGATGGGCGAGGTGATTCAGCTGCAAGGAGATCAGAGAAAGGATGTCCAGGAGTTCTTGACTGACAAGGAGGGG
CTCGAGCTTGATGCCAAGACCATCAAGGTCCACGGGTTCTAA
Gene >Pro_DTO377G3_2|g6814.t1
ATGTCCATCGAAAACCTCAAGACCTTCGGTAAGTTCGCCACCATTCCCCTCCTGAGCGCGTATCGGGCTTCAACC
CCCACCCGCACGCATATCCACAGCTGTGATGACTATGTATGCGGATGGCGACATATGCCTTTCGTCATGTGTAGT
GCGCGCTGTATATTTCAGCTCTCCCCGCCTGTGTTGCACCGAGTCTCACGACGGCGGGGTAGAGATTTGATACTG
GGCTGAGACTGACATGTGCATATTACAGACCCCTTCGCCGAAGCCGACGAAGATACCGGCGAGACTAAGCAGTCT
CAGAACTATATTCACATACGGATTCAGCGTACGTTCACTCTCCTCTCCTCACCTCCTGTCCTCACCGCCCATGGC
TGCTCTTGCGATTGCCGGCGCTTAAAGGGGGGGCACATGCTAACTCCTTATTCCACAACAGAACGCAATGGTCGC
AAGACTCTGACCACTGTTCAGGGTCTTCCCAAGAAGTTCGACCAGAAGAAAATTCTCAAGGTCATCAAGAAGAAG
TTCGGTATGTCTCGTGACCTATGCATACGTATGTCCGGGTCAAATGCTAACTATATCCTAGCTTGCAATGGCACC
ATCGTCTCTGACACCGAGATGGGCGAGGTGATTCAGCTGCAAGGAGATCAGAGAAAGGATGTCCAGGAGTTCTTG
ACTGACAAGGAGGGGCTCGAGCTTGATGCCAAGACCATCAAGGTATGTCGCTGCCCCAATACGTCCTCCGTCACC
ATTACCAGTTCTAATCTGTCATATTTTAGGTCCACGGGTTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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