Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6810.t1
Gene name
Locationscaffold_19:81180..82371
Strand-
Gene length (bp)1191
Transcript length (bp)1047
Coding sequence length (bp)1047
Protein length (aa) 349

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08547 CIA30 Complex I intermediate-associated protein 30 (CIA30) 4.3E-25 44 166
PF08547 CIA30 Complex I intermediate-associated protein 30 (CIA30) 2.7E-12 218 274

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6810.t1
MFPTRRLAQAGFFRRSADEFGRLSKIAWNTEALHTPTKPYVLLDFENEGTVTGCKTMADRAVGGFSTASLDYEPA
EPSTNTPAHARFHGSISTKLPDNWRVERTGYAAFRNQDRGFWLFGRLYWDVDPYAYLALRIKSDGRRYTVNVQTD
AVVETDIHQHRLYTRHHLLRDTPKSEEDYDFQADSPDDVEELYPSGLPAALSDVPPESTIISTSTSTTTSGSNGW
ETVLLPFNSFVRTNHGFVIEPQTSLTRQRVKSIGIGLTDRVEGPFDLRIHKIWATNGISEAEIEEERRICGDYAL
PLDEGVSSGWTNQPEAKSKVKSIKEEIKKQDGDSNKKGLKGLKSEWEE*
Coding >Pro_DTO377G3_2|g6810.t1
ATGTTTCCAACTCGACGTTTAGCCCAAGCCGGATTCTTCAGGCGCAGCGCCGATGAATTCGGCCGTCTGTCAAAG
ATCGCTTGGAACACAGAAGCCCTCCACACCCCGACTAAACCTTATGTCCTCCTGGATTTCGAAAACGAGGGCACT
GTTACAGGATGCAAGACCATGGCCGACCGCGCAGTAGGAGGCTTTAGCACAGCCAGTCTAGATTACGAACCCGCT
GAACCTTCTACAAATACTCCCGCGCATGCCCGCTTCCACGGTAGCATCTCAACCAAGCTTCCTGACAACTGGCGC
GTCGAAAGAACCGGCTATGCCGCGTTCCGCAACCAAGATCGAGGCTTCTGGCTCTTCGGCCGACTTTACTGGGAC
GTTGATCCCTATGCATACCTTGCTCTGCGCATCAAGTCCGACGGCCGCCGATACACCGTCAACGTGCAGACAGAC
GCGGTCGTCGAGACGGATATTCACCAGCACAGACTATACACGCGACACCACCTCCTACGCGACACACCAAAATCG
GAGGAGGACTATGACTTCCAAGCAGACTCACCCGATGATGTCGAGGAGCTATACCCTAGCGGCTTGCCCGCTGCG
CTTTCAGACGTCCCACCTGAATCGACGATCATTTCTACCTCTACCAGTACAACGACCTCTGGCTCAAATGGATGG
GAAACCGTTCTCTTGCCTTTCAACTCGTTTGTGCGTACGAATCACGGCTTTGTCATTGAGCCCCAGACTTCTTTG
ACTCGGCAGCGTGTTAAGAGTATTGGTATTGGTCTTACGGACCGTGTTGAGGGTCCCTTTGATCTACGCATTCAT
AAGATTTGGGCCACGAATGGCATCAGTGAGGCGGAGATTGAAGAGGAGCGACGTATTTGTGGTGATTATGCGCTG
CCTCTTGATGAGGGTGTTAGCTCTGGTTGGACTAATCAACCCGAGGCGAAGTCCAAGGTGAAGTCCATCAAGGAA
GAGATCAAAAAGCAGGATGGGGATTCGAATAAGAAGGGTCTCAAGGGGTTGAAGTCTGAATGGGAGGAGTAA
Transcript >Pro_DTO377G3_2|g6810.t1
ATGTTTCCAACTCGACGTTTAGCCCAAGCCGGATTCTTCAGGCGCAGCGCCGATGAATTCGGCCGTCTGTCAAAG
ATCGCTTGGAACACAGAAGCCCTCCACACCCCGACTAAACCTTATGTCCTCCTGGATTTCGAAAACGAGGGCACT
GTTACAGGATGCAAGACCATGGCCGACCGCGCAGTAGGAGGCTTTAGCACAGCCAGTCTAGATTACGAACCCGCT
GAACCTTCTACAAATACTCCCGCGCATGCCCGCTTCCACGGTAGCATCTCAACCAAGCTTCCTGACAACTGGCGC
GTCGAAAGAACCGGCTATGCCGCGTTCCGCAACCAAGATCGAGGCTTCTGGCTCTTCGGCCGACTTTACTGGGAC
GTTGATCCCTATGCATACCTTGCTCTGCGCATCAAGTCCGACGGCCGCCGATACACCGTCAACGTGCAGACAGAC
GCGGTCGTCGAGACGGATATTCACCAGCACAGACTATACACGCGACACCACCTCCTACGCGACACACCAAAATCG
GAGGAGGACTATGACTTCCAAGCAGACTCACCCGATGATGTCGAGGAGCTATACCCTAGCGGCTTGCCCGCTGCG
CTTTCAGACGTCCCACCTGAATCGACGATCATTTCTACCTCTACCAGTACAACGACCTCTGGCTCAAATGGATGG
GAAACCGTTCTCTTGCCTTTCAACTCGTTTGTGCGTACGAATCACGGCTTTGTCATTGAGCCCCAGACTTCTTTG
ACTCGGCAGCGTGTTAAGAGTATTGGTATTGGTCTTACGGACCGTGTTGAGGGTCCCTTTGATCTACGCATTCAT
AAGATTTGGGCCACGAATGGCATCAGTGAGGCGGAGATTGAAGAGGAGCGACGTATTTGTGGTGATTATGCGCTG
CCTCTTGATGAGGGTGTTAGCTCTGGTTGGACTAATCAACCCGAGGCGAAGTCCAAGGTGAAGTCCATCAAGGAA
GAGATCAAAAAGCAGGATGGGGATTCGAATAAGAAGGGTCTCAAGGGGTTGAAGTCTGAATGGGAGGAGTAA
Gene >Pro_DTO377G3_2|g6810.t1
ATGTTTCCAACTCGACGTTTAGCCCAAGCCGGATTCTTCAGGCGCAGCGCCGATGAATTCGGCCGTCTGTCAAAG
ATCGGTAAGTTGTATGTCGTCATTCTTGCAGCTCAACTAATCTGTCGCAGCTTGGAACACAGAAGCCCTCCACAC
CCCGACTAAACCTTATGTCCTCCTGGATTTCGAAAACGAGGGCACTGTTACAGGATGCAAGACCATGGCCGACCG
CGCAGTAGGAGGCTTTAGCACAGCCAGTCTAGATTACGAACCCGCTGAACCTTCTACAAATACTCCCGCGCATGC
CCGCTTCCACGGTAGCATCTCAACCAAGCTTCCTGACAACTGGCGCGTCGAAAGAACCGGTATGTTATCTACCAG
CTGCCTAATTAGCGACACAGACAAGGATCTAGAGCACGAAAATGAAGATTAAAGATTAAAATTAACTAATACCCG
CAACCAGGCTATGCCGCGTTCCGCAACCAAGATCGAGGCTTCTGGCTCTTCGGCCGACTTTACTGGGACGTTGAT
CCCTATGCATACCTTGCTCTGCGCATCAAGTCCGACGGCCGCCGATACACCGTCAACGTGCAGACAGACGCGGTC
GTCGAGACGGATATTCACCAGCACAGACTATACACGCGACACCACCTCCTACGCGACACACCAAAATCGGAGGAG
GACTATGACTTCCAAGCAGACTCACCCGATGATGTCGAGGAGCTATACCCTAGCGGCTTGCCCGCTGCGCTTTCA
GACGTCCCACCTGAATCGACGATCATTTCTACCTCTACCAGTACAACGACCTCTGGCTCAAATGGATGGGAAACC
GTTCTCTTGCCTTTCAACTCGTTTGTGCGTACGAATCACGGCTTTGTCATTGAGCCCCAGACTTCTTTGACTCGG
CAGCGTGTTAAGAGTATTGGTATTGGTCTTACGGACCGTGTTGAGGGTCCCTTTGATCTACGCATTCATAAGATT
TGGGCCACGAATGGCATCAGTGAGGCGGAGATTGAAGAGGAGCGACGTATTTGTGGTGATTATGCGCTGCCTCTT
GATGAGGGTGTTAGCTCTGGTTGGACTAATCAACCCGAGGCGAAGTCCAAGGTGAAGTCCATCAAGGAAGAGATC
AAAAAGCAGGATGGGGATTCGAATAAGAAGGGTCTCAAGGGGTTGAAGTCTGAATGGGAGGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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