© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO377G3_2|g6801.t1 |
| Gene name | |
| Location | scaffold_19:62174..63575 |
| Strand | - |
| Gene length (bp) | 1401 |
| Transcript length (bp) | 1401 |
| Coding sequence length (bp) | 1401 |
| Protein length (aa) | 467 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.5E-18 | 40 | 374 |
| PF05978 | UNC-93 | Ion channel regulatory protein UNC-93 | 7.2E-13 | 68 | 280 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 57 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 28 | 50 | 22 |
| 2 | 65 | 87 | 22 |
| 3 | 92 | 114 | 22 |
| 4 | 124 | 146 | 22 |
| 5 | 158 | 180 | 22 |
| 6 | 190 | 212 | 22 |
| 7 | 249 | 271 | 22 |
| 8 | 281 | 302 | 21 |
| 9 | 315 | 334 | 19 |
| 10 | 357 | 379 | 22 |
| 11 | 419 | 441 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g6801.t1 MAPPVASEVVSEQVQDDSQTITRSRTSWYRSIPFQIAVASGVSFTAPGMWDALNNLGAGGAAEPYAVSAANALVY GLFAVVCIAAGAINNRIGLRYGLVLGAIGYPIYGAGLYTNTYHTTTWFMLFGSALCGISAGFFWAAEAAIIIGYP SPKERAFYIAVWQTAKSSGPIVGGAISLGLNAQTAGKGTISASTYIVFIVIMCLGLPISLLLSPAEKVQRKDHSL VVVNMKESWAKEFKAAFSLIFTRRVLLLLPAFFISYFYNGFQSTWLTTYFTVRSRAFSSFLTNFAGIASSFIMAL LLDRQTIFIKTRARIAFCSVVALIIGTWIWATILQKQFYDLPESPVFDWFTPGFNKAYALIFFWTFSGQAFQQFL YWLVGQYSTDISSLSYHCGILRGFEALGQTVAWAMQTEGGANHFVSIGLNFGITVIAFVPTWIVLSELEHSHEVQ VTVEDVPSKIADEATA* |
| Coding | >Pro_DTO377G3_2|g6801.t1 ATGGCCCCTCCTGTCGCGTCAGAAGTCGTTTCTGAGCAAGTCCAAGATGACTCTCAAACTATCACCAGGTCTCGG ACTTCATGGTACCGCTCTATCCCCTTCCAGATCGCCGTGGCTAGTGGTGTCTCATTCACTGCCCCTGGAATGTGG GATGCACTGAACAACCTCGGAGCAGGTGGTGCAGCCGAGCCCTACGCTGTTTCCGCGGCGAACGCTTTGGTCTAC GGATTATTTGCCGTTGTTTGTATCGCCGCTGGTGCAATCAACAACCGTATTGGTCTACGCTACGGTCTAGTTCTC GGTGCGATCGGTTACCCGATCTATGGTGCCGGTCTGTACACCAACACATACCACACCACGACATGGTTCATGCTC TTCGGCTCCGCCCTGTGCGGTATCTCAGCGGGATTTTTCTGGGCTGCCGAGGCCGCTATTATCATTGGTTATCCC AGTCCCAAGGAGCGCGCTTTCTACATCGCTGTCTGGCAGACCGCGAAATCTTCTGGTCCGATCGTCGGTGGTGCA ATCAGTCTGGGACTGAACGCACAGACGGCCGGAAAGGGAACGATCAGCGCTTCGACTTATATCGTCTTCATTGTC ATTATGTGCCTCGGTCTGCCCATTTCGCTCCTACTCAGTCCTGCCGAGAAGGTGCAGCGCAAGGACCACTCTCTT GTGGTTGTGAACATGAAAGAGAGTTGGGCCAAGGAATTCAAGGCTGCCTTTTCTCTGATCTTCACTCGCCGTGTG CTCCTCCTCCTGCCAGCCTTCTTCATCAGTTACTTCTACAACGGCTTCCAGAGCACCTGGCTGACCACCTACTTC ACCGTGCGATCTCGCGCATTCTCATCTTTCCTCACCAACTTCGCCGGAATCGCGTCTTCGTTCATCATGGCGCTG CTGCTTGATCGCCAGACCATCTTCATCAAGACCCGCGCCAGAATTGCATTCTGCTCCGTCGTTGCCCTGATCATC GGCACCTGGATCTGGGCTACTATCCTACAGAAGCAGTTCTACGACCTACCCGAGTCCCCGGTGTTCGACTGGTTC ACACCGGGCTTCAACAAAGCGTACGCGCTGATCTTCTTCTGGACCTTCAGCGGCCAAGCCTTCCAGCAATTCCTC TACTGGCTGGTCGGCCAGTACAGCACCGACATCTCATCGTTATCCTACCACTGCGGTATCCTGCGTGGATTCGAG GCTCTGGGACAGACCGTCGCATGGGCCATGCAGACCGAAGGCGGCGCCAACCACTTCGTCAGCATCGGTCTCAAC TTTGGAATCACGGTTATCGCGTTCGTTCCCACGTGGATTGTCCTGTCGGAATTGGAACACAGCCACGAGGTGCAG GTCACCGTGGAGGACGTCCCGTCCAAAATAGCCGACGAGGCAACTGCTTAA |
| Transcript | >Pro_DTO377G3_2|g6801.t1 ATGGCCCCTCCTGTCGCGTCAGAAGTCGTTTCTGAGCAAGTCCAAGATGACTCTCAAACTATCACCAGGTCTCGG ACTTCATGGTACCGCTCTATCCCCTTCCAGATCGCCGTGGCTAGTGGTGTCTCATTCACTGCCCCTGGAATGTGG GATGCACTGAACAACCTCGGAGCAGGTGGTGCAGCCGAGCCCTACGCTGTTTCCGCGGCGAACGCTTTGGTCTAC GGATTATTTGCCGTTGTTTGTATCGCCGCTGGTGCAATCAACAACCGTATTGGTCTACGCTACGGTCTAGTTCTC GGTGCGATCGGTTACCCGATCTATGGTGCCGGTCTGTACACCAACACATACCACACCACGACATGGTTCATGCTC TTCGGCTCCGCCCTGTGCGGTATCTCAGCGGGATTTTTCTGGGCTGCCGAGGCCGCTATTATCATTGGTTATCCC AGTCCCAAGGAGCGCGCTTTCTACATCGCTGTCTGGCAGACCGCGAAATCTTCTGGTCCGATCGTCGGTGGTGCA ATCAGTCTGGGACTGAACGCACAGACGGCCGGAAAGGGAACGATCAGCGCTTCGACTTATATCGTCTTCATTGTC ATTATGTGCCTCGGTCTGCCCATTTCGCTCCTACTCAGTCCTGCCGAGAAGGTGCAGCGCAAGGACCACTCTCTT GTGGTTGTGAACATGAAAGAGAGTTGGGCCAAGGAATTCAAGGCTGCCTTTTCTCTGATCTTCACTCGCCGTGTG CTCCTCCTCCTGCCAGCCTTCTTCATCAGTTACTTCTACAACGGCTTCCAGAGCACCTGGCTGACCACCTACTTC ACCGTGCGATCTCGCGCATTCTCATCTTTCCTCACCAACTTCGCCGGAATCGCGTCTTCGTTCATCATGGCGCTG CTGCTTGATCGCCAGACCATCTTCATCAAGACCCGCGCCAGAATTGCATTCTGCTCCGTCGTTGCCCTGATCATC GGCACCTGGATCTGGGCTACTATCCTACAGAAGCAGTTCTACGACCTACCCGAGTCCCCGGTGTTCGACTGGTTC ACACCGGGCTTCAACAAAGCGTACGCGCTGATCTTCTTCTGGACCTTCAGCGGCCAAGCCTTCCAGCAATTCCTC TACTGGCTGGTCGGCCAGTACAGCACCGACATCTCATCGTTATCCTACCACTGCGGTATCCTGCGTGGATTCGAG GCTCTGGGACAGACCGTCGCATGGGCCATGCAGACCGAAGGCGGCGCCAACCACTTCGTCAGCATCGGTCTCAAC TTTGGAATCACGGTTATCGCGTTCGTTCCCACGTGGATTGTCCTGTCGGAATTGGAACACAGCCACGAGGTGCAG GTCACCGTGGAGGACGTCCCGTCCAAAATAGCCGACGAGGCAACTGCTTAA |
| Gene | >Pro_DTO377G3_2|g6801.t1 ATGGCCCCTCCTGTCGCGTCAGAAGTCGTTTCTGAGCAAGTCCAAGATGACTCTCAAACTATCACCAGGTCTCGG ACTTCATGGTACCGCTCTATCCCCTTCCAGATCGCCGTGGCTAGTGGTGTCTCATTCACTGCCCCTGGAATGTGG GATGCACTGAACAACCTCGGAGCAGGTGGTGCAGCCGAGCCCTACGCTGTTTCCGCGGCGAACGCTTTGGTCTAC GGATTATTTGCCGTTGTTTGTATCGCCGCTGGTGCAATCAACAACCGTATTGGTCTACGCTACGGTCTAGTTCTC GGTGCGATCGGTTACCCGATCTATGGTGCCGGTCTGTACACCAACACATACCACACCACGACATGGTTCATGCTC TTCGGCTCCGCCCTGTGCGGTATCTCAGCGGGATTTTTCTGGGCTGCCGAGGCCGCTATTATCATTGGTTATCCC AGTCCCAAGGAGCGCGCTTTCTACATCGCTGTCTGGCAGACCGCGAAATCTTCTGGTCCGATCGTCGGTGGTGCA ATCAGTCTGGGACTGAACGCACAGACGGCCGGAAAGGGAACGATCAGCGCTTCGACTTATATCGTCTTCATTGTC ATTATGTGCCTCGGTCTGCCCATTTCGCTCCTACTCAGTCCTGCCGAGAAGGTGCAGCGCAAGGACCACTCTCTT GTGGTTGTGAACATGAAAGAGAGTTGGGCCAAGGAATTCAAGGCTGCCTTTTCTCTGATCTTCACTCGCCGTGTG CTCCTCCTCCTGCCAGCCTTCTTCATCAGTTACTTCTACAACGGCTTCCAGAGCACCTGGCTGACCACCTACTTC ACCGTGCGATCTCGCGCATTCTCATCTTTCCTCACCAACTTCGCCGGAATCGCGTCTTCGTTCATCATGGCGCTG CTGCTTGATCGCCAGACCATCTTCATCAAGACCCGCGCCAGAATTGCATTCTGCTCCGTCGTTGCCCTGATCATC GGCACCTGGATCTGGGCTACTATCCTACAGAAGCAGTTCTACGACCTACCCGAGTCCCCGGTGTTCGACTGGTTC ACACCGGGCTTCAACAAAGCGTACGCGCTGATCTTCTTCTGGACCTTCAGCGGCCAAGCCTTCCAGCAATTCCTC TACTGGCTGGTCGGCCAGTACAGCACCGACATCTCATCGTTATCCTACCACTGCGGTATCCTGCGTGGATTCGAG GCTCTGGGACAGACCGTCGCATGGGCCATGCAGACCGAAGGCGGCGCCAACCACTTCGTCAGCATCGGTCTCAAC TTTGGAATCACGGTTATCGCGTTCGTTCCCACGTGGATTGTCCTGTCGGAATTGGAACACAGCCACGAGGTGCAG GTCACCGTGGAGGACGTCCCGTCCAAAATAGCCGACGAGGCAACTGCTTAA |