Protein ID | Pro_DTO377G3_2|g680.t1 |
Gene name | |
Location | scaffold_01:1753637..1756482 |
Strand | + |
Gene length (bp) | 2845 |
Transcript length (bp) | 2787 |
Coding sequence length (bp) | 2787 |
Protein length (aa) | 929 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10395 | Utp8 | Utp8 family | 5.5E-10 | 3 | 505 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 19 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
3d_25C | Three days - 25 degrees Celsius | 16.17 | 9.11 | 23.23 |
5d_25C | Five days - 25 degrees Celsius | 12.06 | 6.37 | 17.76 |
7d_25C | Seven days - 25 degrees Celsius | 12.78 | 6.84 | 18.72 |
10d_25C | Ten days - 25 degrees Celsius | 7.43 | 3.44 | 11.41 |
7d_15C | Seven days - 15 degrees Celsius | 11.86 | 6.26 | 17.47 |
7d_30C | Seven days - 30 degrees Celsius | 11.91 | 6.28 | 17.54 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
3d_25C | 5d_25C | 0.286764 | no |
3d_25C | 7d_25C | 0.407234 | no |
3d_25C | 7d_15C | 0.249833 | no |
3d_25C | 7d_30C | 0.257627 | no |
3d_25C | 10d_25C | 0.004840 | yes |
5d_25C | 7d_25C | 0.880133 | no |
5d_25C | 7d_15C | 0.968190 | no |
5d_25C | 7d_30C | 0.974969 | no |
5d_25C | 10d_25C | 0.093559 | no |
7d_25C | 7d_15C | 0.841228 | no |
7d_25C | 7d_30C | 0.851513 | no |
7d_25C | 10d_25C | 0.051278 | no |
7d_15C | 7d_30C | 0.992880 | no |
7d_15C | 10d_25C | 0.102428 | no |
7d_30C | 10d_25C | 0.099888 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g680.t1 MDLQSPSVLAQLPRPLHASTGKTRVGDVFSLADAKKRKRYEVAVAVDGEAVNIYNVQTPKLVTSYAVPPQSTFSC RPCSVRRKLSKKSTVRRQTYTAVTKPEHQIKCFVEEIGSSGSSAPVISSSTTTVTDSTSPTTFVGIVPSSTDAEG ETDPFDILAVHEDGRVRRLSSDLKTQRWSIQHSEIAKVCSTHNVQSSFLVEFDDAKKALFKRRQDLALLALGDLT TSGTNEPSILLLVSQPKNTDRVSLKDIIVQMFSVPAHAKSESGLDESQRLRHLQTFHIPDVSGLEATNGNAMQWS FHSGSAGLSLSFEKGFINVDLSQYSPCVTSQFVLEDEEFSSVMRISPQSVIGAQKSLVAVYDTQYHSVQRSIPAG DLLSSTGSTPEAPTNFISYFAKLGIAIATKGNTLIAFDLSSLPSAPSSSLKRTRDSLLIDAIGRGIGSSGAQWDI SSKKHRSDNMASLRLTSPEQVEKWTQLTKTVEKATKTKNIDLFDNAVLTYFSTSDASTTLPVRGQYVNPEATLFL LSKIFAVEESATDDTMSASPSSQLRVAMWPPTTCDWLIRLGHLSLDNVEIALRRACKPRILQPFPTGSFIQALLD SDPSLKQVNQVLEGPTLISSDELAYALKAFLNQARSHSGTLEETARAITNGDLATPTQELSRQLGAETATLKDIF AGLNTSLQKIHSQPVSVVVHSLRSNLSRTELISMVHHLRLSLATGGYTSRFTENPPTPITLDQITPTLSLDVIID LITASVDAVGPSGWISAVPAAGDFEDSVAAAASREMELIADMKSEVSAALAGVEEATYLKGVLCEYLRFADQVDT PATTSEDALAKMDSEAGPSHLVRYEKLNGADLLVFTRPGEGEDGYDGDAGGKMLPLSLKAASNDVSRTKIKKSTG EVKHRSSREIGYLRRKAVGKYSFERLII* |
Coding | >Pro_DTO377G3_2|g680.t1 ATGGATTTGCAGTCCCCATCTGTCCTGGCGCAATTGCCTCGGCCCCTTCACGCTTCTACTGGCAAAACCCGCGTC GGGGATGTCTTCAGTCTCGCCGATGCGAAAAAACGCAAACGCTATGAAGTCGCAGTTGCCGTAGATGGCGAGGCT GTGAACATTTACAACGTTCAAACACCTAAGCTCGTGACTTCCTACGCCGTCCCACCGCAATCTACTTTCTCTTGC CGCCCATGTTCAGTTCGCAGGAAGCTGTCAAAAAAATCAACAGTCCGAAGACAGACTTATACTGCTGTCACGAAA CCCGAACATCAGATCAAGTGCTTTGTGGAGGAGATCGGCAGCAGCGGCTCAAGTGCTCCGGTCATTTCTTCTTCG ACTACCACCGTGACCGACTCGACCAGCCCCACTACTTTTGTGGGAATTGTGCCCTCTAGTACCGATGCCGAAGGA GAGACGGATCCATTTGATATATTGGCTGTCCACGAGGATGGTCGTGTGCGTAGACTGTCGTCGGATTTAAAAACC CAACGATGGAGTATTCAGCACAGTGAGATTGCAAAGGTTTGCTCTACTCACAATGTTCAATCCAGCTTCTTGGTT GAATTTGATGATGCAAAGAAGGCTTTGTTCAAAAGACGACAGGATTTGGCATTGCTGGCGCTGGGCGATCTGACA ACCTCAGGAACCAACGAGCCGTCTATCTTGCTTCTGGTATCCCAACCGAAGAATACCGATCGAGTCTCCCTCAAA GACATCATTGTGCAGATGTTCTCAGTCCCCGCGCATGCGAAGTCAGAGTCAGGGTTGGACGAAAGTCAGCGCCTA CGCCATCTACAAACTTTCCACATCCCGGATGTGAGTGGCCTAGAAGCCACCAATGGCAATGCTATGCAATGGAGC TTCCATTCTGGCTCAGCAGGATTGAGCCTTTCTTTCGAAAAGGGTTTCATCAACGTTGACCTCTCCCAGTACTCT CCCTGTGTCACATCGCAATTCGTCCTTGAAGATGAGGAATTCTCCTCGGTCATGCGCATTTCTCCCCAATCTGTG ATTGGAGCCCAAAAATCTCTTGTGGCGGTATATGATACTCAGTACCATTCTGTGCAGCGCAGCATTCCAGCCGGT GATCTTTTGTCAAGCACTGGGTCGACCCCAGAGGCTCCCACAAACTTCATCAGCTACTTCGCCAAACTTGGGATT GCTATCGCAACCAAGGGCAATACCCTTATTGCTTTTGACTTGAGCTCTCTCCCTAGTGCGCCCAGCTCTTCGCTG AAGCGGACCAGAGATAGCCTGCTCATCGATGCTATCGGGAGAGGTATTGGTTCTTCTGGTGCACAGTGGGATATC TCATCAAAGAAGCACCGATCTGACAACATGGCCTCTCTTCGGCTTACATCACCGGAGCAAGTTGAGAAATGGACA CAGCTCACAAAAACGGTGGAGAAGGCGACCAAGACGAAGAACATTGACTTGTTTGATAATGCGGTCCTGACCTAC TTCAGCACATCGGATGCCTCAACGACGCTCCCAGTGCGCGGGCAGTATGTTAACCCCGAAGCAACTCTTTTCTTG CTGTCCAAAATATTCGCTGTGGAGGAGTCTGCCACAGATGATACAATGTCGGCCTCCCCTTCATCTCAACTCCGT GTTGCCATGTGGCCCCCGACTACTTGTGACTGGCTTATTCGCTTGGGACATCTGTCACTCGACAATGTTGAGATT GCGCTCCGTCGTGCATGCAAGCCACGCATTTTGCAGCCATTCCCCACCGGCTCGTTCATCCAGGCTCTCCTCGAT TCAGATCCCTCCTTGAAGCAGGTCAACCAAGTGCTTGAGGGACCAACTCTGATTTCCTCCGATGAGTTGGCCTAC GCGCTCAAAGCCTTCTTGAACCAGGCACGCTCGCACTCTGGAACTCTCGAGGAAACAGCTCGTGCGATCACAAAC GGTGATCTTGCCACTCCCACCCAGGAACTTTCTAGACAGCTAGGGGCCGAAACGGCAACCCTAAAGGATATATTC GCTGGCCTGAATACCTCCCTTCAAAAGATTCACTCGCAGCCCGTGTCGGTTGTCGTTCATTCCCTCCGCTCCAAT CTCTCGCGGACAGAACTTATTTCTATGGTTCACCATCTCCGTCTTTCCCTCGCTACTGGAGGCTACACTTCTCGG TTCACTGAAAACCCCCCAACACCTATTACTCTCGACCAAATTACTCCCACTCTTTCTCTCGATGTCATCATTGAT CTCATCACTGCCTCTGTGGATGCCGTGGGTCCATCCGGTTGGATCTCGGCCGTCCCCGCAGCGGGTGACTTTGAG GACTCAGTCGCTGCCGCTGCTAGCCGTGAAATGGAATTGATTGCGGACATGAAGTCTGAAGTCTCCGCCGCGCTT GCAGGAGTGGAAGAGGCAACCTATCTCAAGGGTGTCTTGTGCGAGTACCTCCGCTTCGCGGATCAAGTTGACACC CCCGCTACTACCTCCGAGGATGCCCTGGCCAAGATGGATTCCGAGGCCGGTCCATCGCACCTGGTCCGCTACGAG AAACTCAATGGCGCCGACTTGCTTGTCTTCACCCGTCCCGGCGAGGGAGAGGACGGCTACGATGGCGATGCTGGT GGCAAAATGCTACCGCTGTCACTCAAAGCTGCTTCCAATGACGTGTCCCGCACTAAGATTAAAAAATCCACGGGC GAGGTGAAGCATCGCAGCAGTCGTGAGATTGGTTACTTGCGCCGCAAGGCGGTTGGCAAGTACTCATTCGAGAGA CTGATTATTTAA |
Transcript | >Pro_DTO377G3_2|g680.t1 ATGGATTTGCAGTCCCCATCTGTCCTGGCGCAATTGCCTCGGCCCCTTCACGCTTCTACTGGCAAAACCCGCGTC GGGGATGTCTTCAGTCTCGCCGATGCGAAAAAACGCAAACGCTATGAAGTCGCAGTTGCCGTAGATGGCGAGGCT GTGAACATTTACAACGTTCAAACACCTAAGCTCGTGACTTCCTACGCCGTCCCACCGCAATCTACTTTCTCTTGC CGCCCATGTTCAGTTCGCAGGAAGCTGTCAAAAAAATCAACAGTCCGAAGACAGACTTATACTGCTGTCACGAAA CCCGAACATCAGATCAAGTGCTTTGTGGAGGAGATCGGCAGCAGCGGCTCAAGTGCTCCGGTCATTTCTTCTTCG ACTACCACCGTGACCGACTCGACCAGCCCCACTACTTTTGTGGGAATTGTGCCCTCTAGTACCGATGCCGAAGGA GAGACGGATCCATTTGATATATTGGCTGTCCACGAGGATGGTCGTGTGCGTAGACTGTCGTCGGATTTAAAAACC CAACGATGGAGTATTCAGCACAGTGAGATTGCAAAGGTTTGCTCTACTCACAATGTTCAATCCAGCTTCTTGGTT GAATTTGATGATGCAAAGAAGGCTTTGTTCAAAAGACGACAGGATTTGGCATTGCTGGCGCTGGGCGATCTGACA ACCTCAGGAACCAACGAGCCGTCTATCTTGCTTCTGGTATCCCAACCGAAGAATACCGATCGAGTCTCCCTCAAA GACATCATTGTGCAGATGTTCTCAGTCCCCGCGCATGCGAAGTCAGAGTCAGGGTTGGACGAAAGTCAGCGCCTA CGCCATCTACAAACTTTCCACATCCCGGATGTGAGTGGCCTAGAAGCCACCAATGGCAATGCTATGCAATGGAGC TTCCATTCTGGCTCAGCAGGATTGAGCCTTTCTTTCGAAAAGGGTTTCATCAACGTTGACCTCTCCCAGTACTCT CCCTGTGTCACATCGCAATTCGTCCTTGAAGATGAGGAATTCTCCTCGGTCATGCGCATTTCTCCCCAATCTGTG ATTGGAGCCCAAAAATCTCTTGTGGCGGTATATGATACTCAGTACCATTCTGTGCAGCGCAGCATTCCAGCCGGT GATCTTTTGTCAAGCACTGGGTCGACCCCAGAGGCTCCCACAAACTTCATCAGCTACTTCGCCAAACTTGGGATT GCTATCGCAACCAAGGGCAATACCCTTATTGCTTTTGACTTGAGCTCTCTCCCTAGTGCGCCCAGCTCTTCGCTG AAGCGGACCAGAGATAGCCTGCTCATCGATGCTATCGGGAGAGGTATTGGTTCTTCTGGTGCACAGTGGGATATC TCATCAAAGAAGCACCGATCTGACAACATGGCCTCTCTTCGGCTTACATCACCGGAGCAAGTTGAGAAATGGACA CAGCTCACAAAAACGGTGGAGAAGGCGACCAAGACGAAGAACATTGACTTGTTTGATAATGCGGTCCTGACCTAC TTCAGCACATCGGATGCCTCAACGACGCTCCCAGTGCGCGGGCAGTATGTTAACCCCGAAGCAACTCTTTTCTTG CTGTCCAAAATATTCGCTGTGGAGGAGTCTGCCACAGATGATACAATGTCGGCCTCCCCTTCATCTCAACTCCGT GTTGCCATGTGGCCCCCGACTACTTGTGACTGGCTTATTCGCTTGGGACATCTGTCACTCGACAATGTTGAGATT GCGCTCCGTCGTGCATGCAAGCCACGCATTTTGCAGCCATTCCCCACCGGCTCGTTCATCCAGGCTCTCCTCGAT TCAGATCCCTCCTTGAAGCAGGTCAACCAAGTGCTTGAGGGACCAACTCTGATTTCCTCCGATGAGTTGGCCTAC GCGCTCAAAGCCTTCTTGAACCAGGCACGCTCGCACTCTGGAACTCTCGAGGAAACAGCTCGTGCGATCACAAAC GGTGATCTTGCCACTCCCACCCAGGAACTTTCTAGACAGCTAGGGGCCGAAACGGCAACCCTAAAGGATATATTC GCTGGCCTGAATACCTCCCTTCAAAAGATTCACTCGCAGCCCGTGTCGGTTGTCGTTCATTCCCTCCGCTCCAAT CTCTCGCGGACAGAACTTATTTCTATGGTTCACCATCTCCGTCTTTCCCTCGCTACTGGAGGCTACACTTCTCGG TTCACTGAAAACCCCCCAACACCTATTACTCTCGACCAAATTACTCCCACTCTTTCTCTCGATGTCATCATTGAT CTCATCACTGCCTCTGTGGATGCCGTGGGTCCATCCGGTTGGATCTCGGCCGTCCCCGCAGCGGGTGACTTTGAG GACTCAGTCGCTGCCGCTGCTAGCCGTGAAATGGAATTGATTGCGGACATGAAGTCTGAAGTCTCCGCCGCGCTT GCAGGAGTGGAAGAGGCAACCTATCTCAAGGGTGTCTTGTGCGAGTACCTCCGCTTCGCGGATCAAGTTGACACC CCCGCTACTACCTCCGAGGATGCCCTGGCCAAGATGGATTCCGAGGCCGGTCCATCGCACCTGGTCCGCTACGAG AAACTCAATGGCGCCGACTTGCTTGTCTTCACCCGTCCCGGCGAGGGAGAGGACGGCTACGATGGCGATGCTGGT GGCAAAATGCTACCGCTGTCACTCAAAGCTGCTTCCAATGACGTGTCCCGCACTAAGATTAAAAAATCCACGGGC GAGGTGAAGCATCGCAGCAGTCGTGAGATTGGTTACTTGCGCCGCAAGGCGGTTGGCAAGTACTCATTCGAGAGA CTGATTATTTAA |
Gene | >Pro_DTO377G3_2|g680.t1 ATGGATTTGCAGTCCCCATCTGTCCTGGCGCAATTGCCTCGGCCCCTTCACGCTTCTACTGGCAAAACCCGCGTC GGGGATGTCTTCAGTCTCGCCGATGCGAAAAAACGCAAACGCTATGAAGTCGCAGTTGCCGTAGATGGCGAGGCT GTGAACATTTACAACGTATGCTTGCTCATTATCCAATGCTCCCTCAGTTGCATCTGACACTAATCTTTATCAGGT TCAAACACCTAAGCTCGTGACTTCCTACGCCGTCCCACCGCAATCTACTTTCTCTTGCCGCCCATGTTCAGTTCG CAGGAAGCTGTCAAAAAAATCAACAGTCCGAAGACAGACTTATACTGCTGTCACGAAACCCGAACATCAGATCAA GTGCTTTGTGGAGGAGATCGGCAGCAGCGGCTCAAGTGCTCCGGTCATTTCTTCTTCGACTACCACCGTGACCGA CTCGACCAGCCCCACTACTTTTGTGGGAATTGTGCCCTCTAGTACCGATGCCGAAGGAGAGACGGATCCATTTGA TATATTGGCTGTCCACGAGGATGGTCGTGTGCGTAGACTGTCGTCGGATTTAAAAACCCAACGATGGAGTATTCA GCACAGTGAGATTGCAAAGGTTTGCTCTACTCACAATGTTCAATCCAGCTTCTTGGTTGAATTTGATGATGCAAA GAAGGCTTTGTTCAAAAGACGACAGGATTTGGCATTGCTGGCGCTGGGCGATCTGACAACCTCAGGAACCAACGA GCCGTCTATCTTGCTTCTGGTATCCCAACCGAAGAATACCGATCGAGTCTCCCTCAAAGACATCATTGTGCAGAT GTTCTCAGTCCCCGCGCATGCGAAGTCAGAGTCAGGGTTGGACGAAAGTCAGCGCCTACGCCATCTACAAACTTT CCACATCCCGGATGTGAGTGGCCTAGAAGCCACCAATGGCAATGCTATGCAATGGAGCTTCCATTCTGGCTCAGC AGGATTGAGCCTTTCTTTCGAAAAGGGTTTCATCAACGTTGACCTCTCCCAGTACTCTCCCTGTGTCACATCGCA ATTCGTCCTTGAAGATGAGGAATTCTCCTCGGTCATGCGCATTTCTCCCCAATCTGTGATTGGAGCCCAAAAATC TCTTGTGGCGGTATATGATACTCAGTACCATTCTGTGCAGCGCAGCATTCCAGCCGGTGATCTTTTGTCAAGCAC TGGGTCGACCCCAGAGGCTCCCACAAACTTCATCAGCTACTTCGCCAAACTTGGGATTGCTATCGCAACCAAGGG CAATACCCTTATTGCTTTTGACTTGAGCTCTCTCCCTAGTGCGCCCAGCTCTTCGCTGAAGCGGACCAGAGATAG CCTGCTCATCGATGCTATCGGGAGAGGTATTGGTTCTTCTGGTGCACAGTGGGATATCTCATCAAAGAAGCACCG ATCTGACAACATGGCCTCTCTTCGGCTTACATCACCGGAGCAAGTTGAGAAATGGACACAGCTCACAAAAACGGT GGAGAAGGCGACCAAGACGAAGAACATTGACTTGTTTGATAATGCGGTCCTGACCTACTTCAGCACATCGGATGC CTCAACGACGCTCCCAGTGCGCGGGCAGTATGTTAACCCCGAAGCAACTCTTTTCTTGCTGTCCAAAATATTCGC TGTGGAGGAGTCTGCCACAGATGATACAATGTCGGCCTCCCCTTCATCTCAACTCCGTGTTGCCATGTGGCCCCC GACTACTTGTGACTGGCTTATTCGCTTGGGACATCTGTCACTCGACAATGTTGAGATTGCGCTCCGTCGTGCATG CAAGCCACGCATTTTGCAGCCATTCCCCACCGGCTCGTTCATCCAGGCTCTCCTCGATTCAGATCCCTCCTTGAA GCAGGTCAACCAAGTGCTTGAGGGACCAACTCTGATTTCCTCCGATGAGTTGGCCTACGCGCTCAAAGCCTTCTT GAACCAGGCACGCTCGCACTCTGGAACTCTCGAGGAAACAGCTCGTGCGATCACAAACGGTGATCTTGCCACTCC CACCCAGGAACTTTCTAGACAGCTAGGGGCCGAAACGGCAACCCTAAAGGATATATTCGCTGGCCTGAATACCTC CCTTCAAAAGATTCACTCGCAGCCCGTGTCGGTTGTCGTTCATTCCCTCCGCTCCAATCTCTCGCGGACAGAACT TATTTCTATGGTTCACCATCTCCGTCTTTCCCTCGCTACTGGAGGCTACACTTCTCGGTTCACTGAAAACCCCCC AACACCTATTACTCTCGACCAAATTACTCCCACTCTTTCTCTCGATGTCATCATTGATCTCATCACTGCCTCTGT GGATGCCGTGGGTCCATCCGGTTGGATCTCGGCCGTCCCCGCAGCGGGTGACTTTGAGGACTCAGTCGCTGCCGC TGCTAGCCGTGAAATGGAATTGATTGCGGACATGAAGTCTGAAGTCTCCGCCGCGCTTGCAGGAGTGGAAGAGGC AACCTATCTCAAGGGTGTCTTGTGCGAGTACCTCCGCTTCGCGGATCAAGTTGACACCCCCGCTACTACCTCCGA GGATGCCCTGGCCAAGATGGATTCCGAGGCCGGTCCATCGCACCTGGTCCGCTACGAGAAACTCAATGGCGCCGA CTTGCTTGTCTTCACCCGTCCCGGCGAGGGAGAGGACGGCTACGATGGCGATGCTGGTGGCAAAATGCTACCGCT GTCACTCAAAGCTGCTTCCAATGACGTGTCCCGCACTAAGATTAAAAAATCCACGGGCGAGGTGAAGCATCGCAG CAGTCGTGAGATTGGTTACTTGCGCCGCAAGGCGGTTGGCAAGTACTCATTCGAGAGACTGATTATTTAA |