Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g6789.t1
Gene name
Location	scaffold_19:39359..40688
Strand	-
Gene length (bp)	1329
Transcript length (bp)	1182
Coding sequence length (bp)	1182
Protein length (aa)	394

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08542	Rep_fac_C	Replication factor C C-terminal domain	3.8E-20	296	384
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	1.8E-14	72	201
PF13177	DNA_pol3_delta2	DNA polymerase III, delta subunit	1.3E-08	53	206
PF03215	Rad17	Rad17 P-loop domain	1.5E-08	34	93

GO

GO Term	Description	Terminal node
GO:0016887	ATP hydrolysis activity	Yes
GO:0005524	ATP binding	Yes
GO:0005488	binding	No
GO:0032553	ribonucleotide binding	No
GO:0035639	purine ribonucleoside triphosphate binding	No
GO:0032559	adenyl ribonucleotide binding	No
GO:0043167	ion binding	No
GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	No
GO:0017076	purine nucleotide binding	No
GO:0097367	carbohydrate derivative binding	No
GO:0016462	pyrophosphatase activity	No
GO:0030554	adenyl nucleotide binding	No
GO:0000166	nucleotide binding	No
GO:0003824	catalytic activity	No
GO:0036094	small molecule binding	No
GO:0003674	molecular_function	No
GO:0097159	organic cyclic compound binding	No
GO:0032555	purine ribonucleotide binding	No
GO:0016787	hydrolase activity	No
GO:1901363	heterocyclic compound binding	No
GO:0043168	anion binding	No
GO:0016817	hydrolase activity, acting on acid anhydrides	No
GO:1901265	nucleoside phosphate binding	No
GO:0017111	nucleoside-triphosphatase activity	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 26	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g6789.t1 MAASFFNNKARAAAAAASSSSKLKAGDNKEDSTKLQPWVEKYRPKTLDDVAAQDHTTKVLRRTLQASNLPHMLFY GPPGTGKTSTILALAKSLFGPALYRSRILELNASDERGIGIVRDKVKNFARAQLSQPTGLDAAYRAQYPCPPFKI IILDEADSMTQDAQSALRRTMETYSRITRFCLVCNYVTRIIEPLASRCSKFRFKMLDNSAAGERISNIAEQEGLQ LEDGVVDTLIRCGEGDLRRAITYLQSAARLVGPTKPPAVKDADDDAEMTDVGSNSSVITVNSIEEIAGVLPDDVL DSLVEAMQPTSGASAYEAVSGVITDIVADGWSATQLVGQLYRRVVFNEAIPDIQKNKIVMLFSEVDKRLVDGSDE HLSMLDLALRIAGVLRGN*
Coding	>Pro_DTO377G3_2\|g6789.t1 ATGGCTGCCTCTTTTTTCAATAATAAGGCTCGTGCCGCTGCCGCCGCAGCATCCAGCAGCTCTAAGCTCAAGGCT GGCGACAACAAGGAAGACTCAACTAAACTCCAGCCGTGGGTTGAGAAATATCGCCCCAAGACCCTGGATGATGTT GCTGCGCAAGACCACACGACCAAAGTCTTGCGGCGCACTCTGCAAGCTTCAAACCTCCCCCATATGCTCTTCTAC GGACCCCCCGGCACAGGAAAAACATCCACAATCCTCGCCCTCGCCAAATCCCTCTTCGGGCCCGCCCTTTACCGC TCCCGAATCCTCGAACTCAACGCCTCCGACGAGCGCGGTATCGGCATCGTCCGCGACAAAGTGAAGAATTTCGCG CGAGCCCAGCTCTCCCAACCAACAGGCCTGGACGCCGCCTACCGCGCACAGTACCCATGTCCACCATTCAAGATC ATCATCCTCGACGAGGCAGACAGCATGACGCAAGACGCACAGTCCGCTTTGCGCCGCACGATGGAGACATACAGT CGGATCACACGTTTCTGTCTTGTCTGCAACTACGTCACGCGCATCATCGAGCCGCTCGCCAGTCGTTGCAGCAAG TTCCGGTTCAAGATGCTGGATAATAGCGCTGCTGGTGAGCGGATCTCGAATATCGCAGAGCAGGAGGGCTTGCAG CTTGAGGATGGAGTTGTTGATACGCTTATCCGGTGTGGCGAGGGTGATTTGCGTCGTGCCATCACGTATCTGCAG AGCGCGGCGCGCTTGGTCGGTCCTACGAAGCCGCCTGCTGTGAAGGATGCCGATGATGATGCGGAGATGACGGAT GTGGGTAGTAATTCTAGTGTTATTACGGTTAACAGCATTGAGGAAATCGCCGGGGTGCTGCCGGATGATGTTTTG GATTCTCTTGTCGAGGCTATGCAGCCTACGAGTGGTGCGTCGGCCTACGAGGCTGTCTCGGGGGTGATTACGGAT ATTGTGGCTGATGGCTGGAGTGCTACGCAGCTGGTTGGACAGTTATACCGCCGTGTAGTGTTCAACGAGGCAATT CCCGATATTCAGAAAAACAAGATTGTCATGCTCTTCTCAGAGGTCGACAAGCGACTGGTTGATGGATCCGACGAG CATCTCTCCATGTTGGACCTAGCATTACGCATCGCTGGAGTTCTGCGTGGAAACTAG
Transcript	>Pro_DTO377G3_2\|g6789.t1 ATGGCTGCCTCTTTTTTCAATAATAAGGCTCGTGCCGCTGCCGCCGCAGCATCCAGCAGCTCTAAGCTCAAGGCT GGCGACAACAAGGAAGACTCAACTAAACTCCAGCCGTGGGTTGAGAAATATCGCCCCAAGACCCTGGATGATGTT GCTGCGCAAGACCACACGACCAAAGTCTTGCGGCGCACTCTGCAAGCTTCAAACCTCCCCCATATGCTCTTCTAC GGACCCCCCGGCACAGGAAAAACATCCACAATCCTCGCCCTCGCCAAATCCCTCTTCGGGCCCGCCCTTTACCGC TCCCGAATCCTCGAACTCAACGCCTCCGACGAGCGCGGTATCGGCATCGTCCGCGACAAAGTGAAGAATTTCGCG CGAGCCCAGCTCTCCCAACCAACAGGCCTGGACGCCGCCTACCGCGCACAGTACCCATGTCCACCATTCAAGATC ATCATCCTCGACGAGGCAGACAGCATGACGCAAGACGCACAGTCCGCTTTGCGCCGCACGATGGAGACATACAGT CGGATCACACGTTTCTGTCTTGTCTGCAACTACGTCACGCGCATCATCGAGCCGCTCGCCAGTCGTTGCAGCAAG TTCCGGTTCAAGATGCTGGATAATAGCGCTGCTGGTGAGCGGATCTCGAATATCGCAGAGCAGGAGGGCTTGCAG CTTGAGGATGGAGTTGTTGATACGCTTATCCGGTGTGGCGAGGGTGATTTGCGTCGTGCCATCACGTATCTGCAG AGCGCGGCGCGCTTGGTCGGTCCTACGAAGCCGCCTGCTGTGAAGGATGCCGATGATGATGCGGAGATGACGGAT GTGGGTAGTAATTCTAGTGTTATTACGGTTAACAGCATTGAGGAAATCGCCGGGGTGCTGCCGGATGATGTTTTG GATTCTCTTGTCGAGGCTATGCAGCCTACGAGTGGTGCGTCGGCCTACGAGGCTGTCTCGGGGGTGATTACGGAT ATTGTGGCTGATGGCTGGAGTGCTACGCAGCTGGTTGGACAGTTATACCGCCGTGTAGTGTTCAACGAGGCAATT CCCGATATTCAGAAAAACAAGATTGTCATGCTCTTCTCAGAGGTCGACAAGCGACTGGTTGATGGATCCGACGAG CATCTCTCCATGTTGGACCTAGCATTACGCATCGCTGGAGTTCTGCGTGGAAACTAG
Gene	>Pro_DTO377G3_2\|g6789.t1 ATGGCTGCCTCTTTTTTCAATAATAAGGCTCGTGCCGCTGCCGCCGCAGCATCCAGCAGCTCTAAGCTCAAGGCT GGCGACAACAAGGAAGACTCAACTAAACTCCAGCCGTGGGTTGAGAAATAGTAAGTCAATGCTCTATTCCAGCTT ACCCAGCATTGGCTAATATCAATTAGTCGCCCCAAGACCCTGGATGATGTTGCTGCGCAAGACCACACGACCAAA GTCTTGCGGCGCACTCTGCAAGCTTCAAACGTAAACCACCCGCCCCGAACAATTGAAGCAATAAAATAACACTCG CAGCTCCCCCATATGCTCTTCTACGGACCCCCCGGCACAGGAAAAACATCCACAATCCTCGCCCTCGCCAAATCC CTCTTCGGGCCCGCCCTTTACCGCTCCCGAATCCTCGAACTCAACGCCTCCGACGAGCGCGGTATCGGCATCGTC CGCGACAAAGTGAAGAATTTCGCGCGAGCCCAGCTCTCCCAACCAACAGGCCTGGACGCCGCCTACCGCGCACAG TACCCATGTCCACCATTCAAGATCATCATCCTCGACGAGGCAGACAGCATGACGCAAGACGCACAGTCCGCTTTG CGCCGCACGATGGAGACATACAGTCGGATCACACGTTTCTGTCTTGTCTGCAACTACGTCACGCGCATCATCGAG CCGCTCGCCAGTCGTTGCAGCAAGTTCCGGTTCAAGATGCTGGATAATAGCGCTGCTGGTGAGCGGATCTCGAAT ATCGCAGAGCAGGAGGGCTTGCAGCTTGAGGATGGAGTTGTTGATACGCTTATCCGGTGTGGCGAGGGTGATTTG CGTCGTGCCATCACGTATCTGCAGAGCGCGGCGCGCTTGGTCGGTCCTACGAAGCCGCCTGCTGTGAAGGATGCC GATGATGATGCGGAGATGACGGATGTGGGTAGTAATTCTAGTGTTATTACGGTTAACAGCATTGAGGAAATCGCC GGGGTGCTGCCGGATGATGTTTTGGATTCTCTTGTCGAGGCTATGCAGCCTACGAGTGGTGCGTCGGCCTACGAG GCTGTCTCGGGGGTGATTACGGATATTGTGGCTGATGGCTGGAGTGCTACGCAGCTGGTTGGACAGGTTTGTCTT CTTCCTGGGTGTTCCCCATACCTTTGCTGACCTTTCTAGTTATACCGCCGTGTAGTGTTCAACGAGGCAATTCCC GATATTCAGAAAAACAAGATTGTCATGCTCTTCTCAGAGGTCGACAAGCGACTGGTTGATGGATCCGACGAGCAT CTCTCCATGTTGGACCTAGCATTACGCATCGCTGGAGTTCTGCGTGGAAACTAG

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences