Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g6787.t1
Gene name
Location	scaffold_19:36402..37592
Strand	+
Gene length (bp)	1190
Transcript length (bp)	942
Coding sequence length (bp)	942
Protein length (aa)	314

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13344	Hydrolase_6	Haloacid dehalogenase-like hydrolase	4.9E-30	30	132
PF13242	Hydrolase_like	HAD-hyrolase-like	5.4E-13	233	306
PF00702	Hydrolase	haloacid dehalogenase-like hydrolase	1.5E-10	28	269

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 52	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g6787.t1 MAQESSQVAPRYLTGDKAGLQEFLARFDVFLFDCDGVLWSGDHLFPGTVETLELLRKNGKQIVFVTNNSTKSRAD YRKKLEGLGIPSTVEEIFSSSYSASIYISRILQLPENKRKVYVIGETGIEQELRSENVPFIGGTDPAYRRDVTSE DYNKIAAGDESVLDPEVGVVLVGLDFHVNYLKIALAYHYIKRGAIFLATNVDSTLPHSGSFFPGAGSMSAPLIMM LNQEPVALGKPSQAMMDSIEGKFKFDRSRTCMVGDRVNTDIRFGLEGKLGGTLGVLTGVSSEEEFVSGDVRPHAY LDALSDLLASEGA*
Coding	>Pro_DTO377G3_2\|g6787.t1 ATGGCGCAAGAATCCTCGCAAGTCGCGCCCCGCTACCTGACCGGCGATAAGGCCGGCCTCCAGGAATTCCTAGCC AGATTCGATGTATTCCTCTTCGACTGTGATGGCGTCTTATGGTCCGGCGACCACCTCTTCCCCGGAACAGTAGAG ACACTGGAGCTTCTCCGAAAGAATGGGAAGCAAATCGTTTTCGTGACGAATAACAGCACCAAGTCGCGCGCAGAC TACCGCAAGAAACTCGAAGGCTTAGGGATCCCTAGTACAGTGGAAGAGATCTTCTCCTCCTCATACAGCGCCTCT ATATACATTTCGCGCATCCTCCAACTCCCCGAAAACAAGCGCAAAGTCTACGTGATCGGCGAGACAGGCATCGAG CAAGAGCTCCGCTCCGAGAATGTCCCTTTCATCGGCGGCACAGACCCTGCCTACCGCCGCGACGTCACGTCAGAG GACTACAACAAGATCGCGGCGGGCGATGAGTCCGTCCTAGACCCGGAGGTTGGTGTCGTGCTTGTCGGTCTCGAC TTCCACGTGAATTACCTCAAGATCGCGCTGGCATACCACTACATCAAGCGCGGAGCGATCTTCCTCGCCACGAAC GTCGACTCCACCCTTCCGCACTCGGGGTCTTTTTTCCCTGGCGCTGGCTCCATGAGCGCGCCGCTGATAATGATG CTGAATCAGGAACCGGTCGCTCTCGGAAAACCCAGTCAGGCTATGATGGATTCCATCGAGGGTAAGTTCAAGTTT GATCGTAGCCGGACTTGCATGGTTGGTGACCGTGTGAATACCGATATTCGCTTTGGACTTGAGGGTAAACTTGGC GGTACGCTGGGTGTCTTGACTGGTGTCTCTTCTGAGGAGGAGTTCGTGTCTGGGGATGTCAGGCCTCATGCTTAC TTGGATGCGCTTTCTGATCTACTAGCCTCGGAGGGGGCCTGA
Transcript	>Pro_DTO377G3_2\|g6787.t1 ATGGCGCAAGAATCCTCGCAAGTCGCGCCCCGCTACCTGACCGGCGATAAGGCCGGCCTCCAGGAATTCCTAGCC AGATTCGATGTATTCCTCTTCGACTGTGATGGCGTCTTATGGTCCGGCGACCACCTCTTCCCCGGAACAGTAGAG ACACTGGAGCTTCTCCGAAAGAATGGGAAGCAAATCGTTTTCGTGACGAATAACAGCACCAAGTCGCGCGCAGAC TACCGCAAGAAACTCGAAGGCTTAGGGATCCCTAGTACAGTGGAAGAGATCTTCTCCTCCTCATACAGCGCCTCT ATATACATTTCGCGCATCCTCCAACTCCCCGAAAACAAGCGCAAAGTCTACGTGATCGGCGAGACAGGCATCGAG CAAGAGCTCCGCTCCGAGAATGTCCCTTTCATCGGCGGCACAGACCCTGCCTACCGCCGCGACGTCACGTCAGAG GACTACAACAAGATCGCGGCGGGCGATGAGTCCGTCCTAGACCCGGAGGTTGGTGTCGTGCTTGTCGGTCTCGAC TTCCACGTGAATTACCTCAAGATCGCGCTGGCATACCACTACATCAAGCGCGGAGCGATCTTCCTCGCCACGAAC GTCGACTCCACCCTTCCGCACTCGGGGTCTTTTTTCCCTGGCGCTGGCTCCATGAGCGCGCCGCTGATAATGATG CTGAATCAGGAACCGGTCGCTCTCGGAAAACCCAGTCAGGCTATGATGGATTCCATCGAGGGTAAGTTCAAGTTT GATCGTAGCCGGACTTGCATGGTTGGTGACCGTGTGAATACCGATATTCGCTTTGGACTTGAGGGTAAACTTGGC GGTACGCTGGGTGTCTTGACTGGTGTCTCTTCTGAGGAGGAGTTCGTGTCTGGGGATGTCAGGCCTCATGCTTAC TTGGATGCGCTTTCTGATCTACTAGCCTCGGAGGGGGCCTGA
Gene	>Pro_DTO377G3_2\|g6787.t1 ATGGCGCAAGAATCCTCGCAAGTCGCGCCCCGCTACCTGACCGGCGATAAGGCCGGCCTCCAGGAATTCCTAGCC AGATTCGATGTGAGCACACGTTTTGGATCTACCGATGTACTAGAGAGTCCTGTTACTAACCAGATTCTGTACAGG TATTCCTCTTCGACTGTGATGGTCTGTCCCCTCTGTATCGGCCGAAGCTCCCCGCAGCGCTGAACGCGTCGCAAC AACCGCTGAGACAATAATATTTAGGCGTCTTATGGTCCGGCGACCACCTCTTCCCCGGAACAGTAGAGACACTGG AGCTTCTCCGAAAGAATGGTGCGCATTAAATACCAAGTGCGCAAACAGAGGTTAATAATCCCCAGGGAAGCAAAT CGTTTTCGTGACGAATAACAGCACCAAGTCGCGCGCAGACTACCGCAAGAAACTCGAAGGCTTAGGGATCCCTAG TACAGTGGTCAGTGATACCACCGATTAATCACCTCACCCAGTGGCAGCGACTCACAACCAAACAGGAAGAGATCT TCTCCTCCTCATACAGCGCCTCTATATACATTTCGCGCATCCTCCAACTCCCCGAAAACAAGCGCAAAGTCTACG TGATCGGCGAGACAGGCATCGAGCAAGAGCTCCGCTCCGAGAATGTCCCTTTCATCGGCGGCACAGACCCTGCCT ACCGCCGCGACGTCACGTCAGAGGACTACAACAAGATCGCGGCGGGCGATGAGTCCGTCCTAGACCCGGAGGTTG GTGTCGTGCTTGTCGGTCTCGACTTCCACGTGAATTACCTCAAGATCGCGCTGGCATACCACTACATCAAGCGCG GAGCGATCTTCCTCGCCACGAACGTCGACTCCACCCTTCCGCACTCGGGGTCTTTTTTCCCTGGCGCTGGCTCCA TGAGCGCGCCGCTGATAATGATGCTGAATCAGGAACCGGTCGCTCTCGGAAAACCCAGTCAGGCTATGATGGATT CCATCGAGGGTAAGTTCAAGTTTGATCGTAGCCGGACTTGCATGGTTGGTGACCGTGTGAATACCGATATTCGCT TTGGACTTGAGGGTAAACTTGGCGGTACGCTGGGTGTCTTGACTGGTGTCTCTTCTGAGGAGGAGTTCGTGTCTG GGGATGTCAGGCCTCATGCTTACTTGGATGCGCTTTCTGATCTACTAGCCTCGGAGGGGGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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