Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6785.t1
Gene name
Locationscaffold_19:29819..30908
Strand+
Gene length (bp)1089
Transcript length (bp)759
Coding sequence length (bp)759
Protein length (aa) 253

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00293 NUDIX NUDIX domain 1.4E-08 26 93

GO

GO Term Description Terminal node
GO:0016787 hydrolase activity Yes
GO:0003674 molecular_function No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 41 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6785.t1
MYQEAIARLRNYIPPPTTYYSVPVSRRAAVLLLLFADAKGDLRVVVTIRAKTLSSYAGDAALPGGRAENTESAFQ
TARREACEEIGLPDIQEREKLPPPFSVEHLCEFPANLARTEVVVRPCVALLHSYDAGLGLNSNPEVSLIPILDTR
EVEVVFTAPFQDFLRGHGENGEDWYRGSWGMWHNSQWRMHQFFVPRADQVYRIFGMTARIIVDAARVAYAQEPEF
EHNSHFGDEAMIADLRQLGRLGEKAKV*
Coding >Pro_DTO377G3_2|g6785.t1
ATGTATCAGGAGGCAATCGCCAGACTTCGAAATTACATCCCTCCGCCAACAACGTACTACTCGGTCCCGGTAAGC
AGACGGGCGGCAGTGCTGCTACTGCTCTTCGCCGACGCCAAGGGCGATCTTAGGGTGGTGGTTACGATCCGGGCT
AAGACACTAAGTTCGTACGCGGGAGATGCTGCATTGCCAGGTGGCCGAGCAGAAAATACAGAATCCGCCTTCCAA
ACGGCGCGGCGCGAGGCATGTGAGGAGATCGGCCTCCCCGACATTCAGGAAAGGGAAAAGCTTCCACCCCCGTTC
AGCGTGGAGCATCTCTGCGAGTTCCCGGCAAATCTTGCCCGAACGGAGGTGGTGGTTCGTCCCTGCGTTGCGCTC
CTCCACAGTTATGATGCGGGCTTGGGGCTGAATTCTAATCCTGAGGTGTCACTTATTCCTATTCTGGACACGAGA
GAGGTTGAGGTTGTTTTTACGGCGCCGTTCCAGGACTTTCTGCGCGGACATGGAGAGAATGGGGAGGACTGGTAT
CGTGGGTCTTGGGGGATGTGGCATAATTCGCAATGGAGAATGCATCAGTTCTTTGTTCCCAGAGCAGACCAAGTC
TACCGTATCTTTGGCATGACTGCACGCATTATCGTCGACGCAGCCCGGGTCGCATACGCGCAGGAACCGGAATTC
GAACATAACAGTCATTTTGGCGACGAGGCCATGATCGCCGACCTGCGCCAGTTGGGCCGGTTAGGTGAAAAGGCC
AAAGTTTAG
Transcript >Pro_DTO377G3_2|g6785.t1
ATGTATCAGGAGGCAATCGCCAGACTTCGAAATTACATCCCTCCGCCAACAACGTACTACTCGGTCCCGGTAAGC
AGACGGGCGGCAGTGCTGCTACTGCTCTTCGCCGACGCCAAGGGCGATCTTAGGGTGGTGGTTACGATCCGGGCT
AAGACACTAAGTTCGTACGCGGGAGATGCTGCATTGCCAGGTGGCCGAGCAGAAAATACAGAATCCGCCTTCCAA
ACGGCGCGGCGCGAGGCATGTGAGGAGATCGGCCTCCCCGACATTCAGGAAAGGGAAAAGCTTCCACCCCCGTTC
AGCGTGGAGCATCTCTGCGAGTTCCCGGCAAATCTTGCCCGAACGGAGGTGGTGGTTCGTCCCTGCGTTGCGCTC
CTCCACAGTTATGATGCGGGCTTGGGGCTGAATTCTAATCCTGAGGTGTCACTTATTCCTATTCTGGACACGAGA
GAGGTTGAGGTTGTTTTTACGGCGCCGTTCCAGGACTTTCTGCGCGGACATGGAGAGAATGGGGAGGACTGGTAT
CGTGGGTCTTGGGGGATGTGGCATAATTCGCAATGGAGAATGCATCAGTTCTTTGTTCCCAGAGCAGACCAAGTC
TACCGTATCTTTGGCATGACTGCACGCATTATCGTCGACGCAGCCCGGGTCGCATACGCGCAGGAACCGGAATTC
GAACATAACAGTCATTTTGGCGACGAGGCCATGATCGCCGACCTGCGCCAGTTGGGCCGGTTAGGTGAAAAGGCC
AAAGTTTAG
Gene >Pro_DTO377G3_2|g6785.t1
ATGTATCAGGAGGCAATCGCCAGACTTCGAAATTACATCCCTCCGCCAACAACGTACTACTCGGTCCCGGTAAGC
AGACGGGCGGCAGTGCTGCTACTGCTCTTCGCCGACGCCAAGGGCGATCTTAGGGTGGTGGTTACGATCCGGGCT
AAGACACTAAGTTCGTGTGAGTGACCAGAACTTAGAAAATACGTGGATCAGCCCTGTTCCCAGGCTGCATGACAT
GGGTTGGTTGTTCGGGACTAGGCTAATGATATTCGGGTCTACGGAGTAGACGCGGGAGATGCTGCATTGCCAGGT
GGTAAGTTTGACAGCTCCAGACTCTGCAAGGCAAAGGCAAAAGAGAAAGGAATAAAAAAAAGAATAAATTCCTCG
CTTAAAATAAACTAACCCCTTCTTCACCGGAGTAGGCCGAGCAGAAAATACAGAATCCGCCTTCCAAACGGCGCG
GCGCGAGGCATGTGAGGAGATCGGCCTCCCCGACATTCAGGAAAGGGAAAAGCTTCCACCCCCGTTCAGCGTGGA
GCATCTCTGCGAGTTCCCGGCAAATCTTGCCCGAACGGAGGTGGTGGTTCGTCCCTGCGTTGCGCTCCTCCACAG
TTATGATGCGGGCTTGGGGCTGAATTCTAATCCTGAGGTGTCACTTATTCCTATTCTGGACACGAGAGAGGTTGA
GGTTGTTTTTACGGCGCCGTTCCAGGACTTTCTGCGCGGACATGGAGAGAATGGGGAGGACTGGTATCGTGGGTC
TTGGGGGATGTGGCATAATTCGCAATGGAGAAGTAAGTGGCCTCCCCCTATGTTGATGTATGTGTTGTGTCTGTG
TTGTGTGTGGGATTGCCAAGTGGAGGACGTCCCAAATAGGAAATAGCCTGGAGACTAACTACGCCACTAGTGCAT
CAGTTCTTTGTTCCCAGAGCAGACCAAGTCTACCGTATCTTTGGCATGACTGCACGCATTATCGTCGACGCAGCC
CGGGTCGCATACGCGCAGGAACCGGAATTCGAACATAACAGTCATTTTGGCGACGAGGCCATGATCGCCGACCTG
CGCCAGTTGGGCCGGTTAGGTGAAAAGGCCAAAGTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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