Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6746.t1
Gene name
Locationscaffold_18:394990..396172
Strand-
Gene length (bp)1182
Transcript length (bp)945
Coding sequence length (bp)945
Protein length (aa) 315

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 1.7E-24 20 169
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 5.5E-13 28 165
PF01370 Epimerase NAD dependent epimerase/dehydratase family 9.5E-07 21 217
PF08659 KR KR domain 5.2E-06 21 111

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6746.t1
MHSRDAKFSEKDIPDLSGYVVIVTGGNSGIGYETAQQLAIKNARVYIAGRSQERVQEAIRQMSQSNVTKQLDLRF
LQLDLQDLKSVRAAALRFMTEESRLDILINNAGVMTVPYKLTVDGFETQWQVNYLAPHVLTSTLMPLLLKTASSS
GSSDRVRVVNVSSDAAFFGPKTLLLDDVNMTETKGVMELWQRYGHSKQASIRDAKELNDRYGSQGVTAYSLHPGI
VRSNLQRHDPTVIGSVVRTLMKFAAGSTPLEGALNSLFCATSPKAPIMGQGQYFVPVGKLDSRAANWINDSKTNK
KLWQQSEDLIKRLV*
Coding >Pro_DTO377G3_2|g6746.t1
ATGCACTCCCGAGACGCAAAATTTTCGGAAAAAGACATTCCAGATTTGAGTGGATATGTCGTGATTGTTACTGGA
GGGAATTCTGGGATCGGGTATGAAACTGCGCAGCAGCTTGCTATCAAGAATGCGCGCGTTTACATTGCGGGCCGC
TCCCAAGAGCGAGTTCAAGAGGCTATCCGGCAGATGTCGCAGTCAAATGTAACGAAGCAGCTAGATCTCCGTTTT
CTTCAGCTGGACCTGCAAGACTTGAAATCTGTCAGGGCAGCCGCACTACGTTTCATGACAGAAGAGTCGCGCCTA
GACATTCTGATCAACAACGCTGGCGTCATGACGGTTCCATACAAACTTACTGTTGATGGATTCGAGACACAGTGG
CAGGTTAACTATCTGGCGCCTCATGTCCTTACATCAACCCTGATGCCGCTTCTCTTGAAAACTGCATCTTCTTCC
GGCTCTTCCGACCGTGTGCGCGTTGTCAATGTCTCGAGTGATGCAGCATTTTTCGGTCCGAAGACGTTGTTGCTG
GACGACGTAAACATGACCGAGACGAAGGGAGTGATGGAACTGTGGCAACGGTATGGGCACTCTAAGCAAGCGAGT
ATCCGGGATGCGAAAGAGTTGAACGATCGTTACGGTTCTCAGGGGGTTACCGCATACTCGCTTCATCCGGGTATT
GTCCGATCGAATCTTCAACGGCATGATCCGACCGTCATTGGCAGCGTCGTGCGAACTCTTATGAAATTTGCAGCT
GGTAGCACCCCGCTAGAAGGGGCGTTGAATTCTCTTTTCTGCGCCACCAGTCCGAAGGCGCCGATTATGGGACAA
GGTCAGTATTTCGTTCCGGTGGGTAAATTGGACTCCCGAGCAGCAAATTGGATCAATGATTCGAAGACCAACAAA
AAGCTTTGGCAACAAAGTGAGGATCTGATCAAGCGCTTGGTGTGA
Transcript >Pro_DTO377G3_2|g6746.t1
ATGCACTCCCGAGACGCAAAATTTTCGGAAAAAGACATTCCAGATTTGAGTGGATATGTCGTGATTGTTACTGGA
GGGAATTCTGGGATCGGGTATGAAACTGCGCAGCAGCTTGCTATCAAGAATGCGCGCGTTTACATTGCGGGCCGC
TCCCAAGAGCGAGTTCAAGAGGCTATCCGGCAGATGTCGCAGTCAAATGTAACGAAGCAGCTAGATCTCCGTTTT
CTTCAGCTGGACCTGCAAGACTTGAAATCTGTCAGGGCAGCCGCACTACGTTTCATGACAGAAGAGTCGCGCCTA
GACATTCTGATCAACAACGCTGGCGTCATGACGGTTCCATACAAACTTACTGTTGATGGATTCGAGACACAGTGG
CAGGTTAACTATCTGGCGCCTCATGTCCTTACATCAACCCTGATGCCGCTTCTCTTGAAAACTGCATCTTCTTCC
GGCTCTTCCGACCGTGTGCGCGTTGTCAATGTCTCGAGTGATGCAGCATTTTTCGGTCCGAAGACGTTGTTGCTG
GACGACGTAAACATGACCGAGACGAAGGGAGTGATGGAACTGTGGCAACGGTATGGGCACTCTAAGCAAGCGAGT
ATCCGGGATGCGAAAGAGTTGAACGATCGTTACGGTTCTCAGGGGGTTACCGCATACTCGCTTCATCCGGGTATT
GTCCGATCGAATCTTCAACGGCATGATCCGACCGTCATTGGCAGCGTCGTGCGAACTCTTATGAAATTTGCAGCT
GGTAGCACCCCGCTAGAAGGGGCGTTGAATTCTCTTTTCTGCGCCACCAGTCCGAAGGCGCCGATTATGGGACAA
GGTCAGTATTTCGTTCCGGTGGGTAAATTGGACTCCCGAGCAGCAAATTGGATCAATGATTCGAAGACCAACAAA
AAGCTTTGGCAACAAAGTGAGGATCTGATCAAGCGCTTGGTGTGA
Gene >Pro_DTO377G3_2|g6746.t1
ATGCACTCCCGAGACGCAAAATTTTCGGAAAAAGACATTCCAGATTTGAGTGGATATGTCGTGATTGTTACTGGA
GGTGAGTTCTCTCTATATTGTGTTGTCTGGGAGGCCACACGGTGAATACTCACTGACCTTCATTCAGGGAATTCT
GGGATCGGGTATGAAACTGCGCAGCAGCTTGCTATCAAGAATGCGCGCGTTTACATTGCGGGCCGCTCCCAAGAG
CGAGTTCAAGAGGCTATCCGGCAGATGTCGCAGTCAAATGTAACGAAGCAGCTAGATCTCCGTTTTCTTCAGCTG
GACCTGCAAGACTTGAAATCTGTCAGGGCAGCCGCACTACGTTTCATGACAGAAGAGTCGCGCCTAGACATTCTG
ATCAACAACGCTGGCGTAGGTGGTCTCCTTTCAAGAAAGCCACGGAATGTCAGTTCTGACACTAACTATCAATGC
CCCATCAGGTCATGACGGTTCCATACAAACTTACTGTTGATGGATTCGAGACACAGTGGCAGGTTAACTATCTGG
CGCCTCATGTCCTTACATCAACCCTGATGCCGCTTCTCTTGAAAACTGCATCTTCTTCCGGCTCTTCCGACCGTG
TGCGCGTTGTCAATGTCTCGAGTGATGCAGCATTTTTCGGTCCGAAGACGTTGTTGCTGGACGACGTAAACATGA
CCGAGACGAAGGGAGTGATGGAACTGTGGTATGTGCACACCTGGATGAATGAACCCATGCTCTGTTACTAAATCC
TAGAAGGCAACGGTATGGGCACTCTAAGCAAGCGAGTATCCGGGATGCGAAAGAGTTGAACGATCGTTACGGTTC
TCAGGGTAGGTTACCATCGACTTGAGGAACAACTCCCATGCTGAACAATATACAGGGGTTACCGCATACTCGCTT
CATCCGGGTATTGTCCGATCGAATCTTCAACGGCATGATCCGACCGTCATTGGCAGCGTCGTGCGAACTCTTATG
AAATTTGCAGCTGGTAGCACCCCGCTAGAAGGGGCGTTGAATTCTCTTTTCTGCGCCACCAGTCCGAAGGCGCCG
ATTATGGGACAAGGTCAGTATTTCGTTCCGGTGGGTAAATTGGACTCCCGAGCAGCAAATTGGATCAATGATTCG
AAGACCAACAAAAAGCTTTGGCAACAAAGTGAGGATCTGATCAAGCGCTTGGTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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