Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6731.t1
Gene name
Locationscaffold_18:351527..352948
Strand+
Gene length (bp)1421
Transcript length (bp)1227
Coding sequence length (bp)1227
Protein length (aa) 409

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04366 Ysc84 Las17-binding protein actin regulator 1.5E-39 91 215
PF00018 SH3_1 SH3 domain 7.3E-13 356 403
PF07653 SH3_2 Variant SH3 domain 1.4E-11 355 407
PF14604 SH3_9 Variant SH3 domain 6.8E-10 357 407

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6731.t1
MGFGIHNPLPASMTSECKKAAKILTSFVDPRQAFGPDKVIPPEILANAKGLAILTVLKAGFLGSGRFGSGIVVAR
LGDGSWSAPSAIATAGAGIGGQIGFELTDFVFILNDAAAVRTFSQVGTLTLGGNVSLAAGPIGRNAEAAGAASTK
GVAAVFSYSKTKGLFAGVSLEGSMLVERKDANEKLYRSRVSASQLLTGSIRPPPAADALMRVLNSRAFQGNARAY
GDSMYNDIPVYDDSHDDVVWEGRRGDAYGQGTQRGRSNTSENDYSYSDRPRRANTWADDVYDRPASGLSRSVTAR
AAADNSFDGYGRNRSNTAPSEEEYTYSDRRPSRPTAPKPIFQQRTGAAQLRSDQAVALFTFDADQEGDLGFKKGE
IITIIKRTEKAEDWWTGRIGDRVGIFPSNYVEA*
Coding >Pro_DTO377G3_2|g6731.t1
ATGGGTTTCGGCATCCATAATCCGCTGCCGGCGTCTATGACCAGCGAGTGCAAAAAGGCTGCAAAGATCTTGACA
TCGTTCGTTGATCCTAGGCAAGCATTCGGTCCCGACAAAGTCATTCCACCGGAGATTTTGGCCAATGCAAAGGGT
CTCGCTATTCTCACGGTTTTGAAGGCCGGTTTCCTAGGCTCTGGTCGATTCGGCTCCGGTATCGTTGTCGCTCGT
CTTGGCGATGGCTCCTGGTCGGCTCCATCGGCTATTGCGACTGCAGGTGCCGGAATTGGAGGACAGATCGGGTTT
GAGTTGACCGACTTTGTTTTCATTCTCAACGATGCCGCTGCTGTTCGCACATTCTCGCAAGTGGGAACGCTGACG
CTGGGTGGCAATGTATCACTCGCTGCTGGACCGATTGGCCGAAATGCCGAGGCGGCTGGCGCAGCCAGTACGAAG
GGTGTTGCGGCCGTCTTCTCCTACTCAAAAACCAAAGGTCTTTTCGCTGGTGTCAGTCTGGAAGGTAGTATGCTG
GTGGAACGCAAGGATGCGAACGAGAAATTGTACCGCAGTCGTGTCTCCGCTAGCCAACTTCTCACAGGCAGCATT
CGTCCCCCACCGGCCGCCGATGCTCTGATGCGCGTGCTGAACTCCCGTGCATTCCAAGGAAATGCGCGGGCCTAC
GGTGATTCCATGTACAATGACATTCCTGTCTATGACGACAGCCATGACGACGTGGTCTGGGAGGGACGCAGGGGC
GATGCCTACGGTCAAGGTACCCAGCGTGGTCGGTCCAACACCAGTGAAAATGATTACAGCTACAGTGATAGGCCG
CGTCGCGCGAATACCTGGGCTGATGATGTCTATGATCGGCCTGCCTCGGGGCTTTCTCGTTCCGTGACAGCTCGG
GCCGCTGCTGACAATTCATTTGATGGCTATGGGCGCAACCGGAGCAACACCGCGCCATCTGAAGAGGAATATACC
TATTCGGATCGCAGACCTTCCCGTCCAACTGCTCCTAAACCGATCTTCCAGCAAAGGACTGGTGCAGCCCAATTG
CGGTCAGACCAAGCCGTTGCCCTTTTCACATTCGATGCGGATCAGGAGGGTGACCTTGGATTCAAGAAGGGTGAA
ATTATTACCATAATCAAGCGGACGGAGAAGGCGGAAGACTGGTGGACTGGTCGCATTGGTGATCGCGTGGGCATC
TTCCCAAGCAATTATGTTGAGGCTTAA
Transcript >Pro_DTO377G3_2|g6731.t1
ATGGGTTTCGGCATCCATAATCCGCTGCCGGCGTCTATGACCAGCGAGTGCAAAAAGGCTGCAAAGATCTTGACA
TCGTTCGTTGATCCTAGGCAAGCATTCGGTCCCGACAAAGTCATTCCACCGGAGATTTTGGCCAATGCAAAGGGT
CTCGCTATTCTCACGGTTTTGAAGGCCGGTTTCCTAGGCTCTGGTCGATTCGGCTCCGGTATCGTTGTCGCTCGT
CTTGGCGATGGCTCCTGGTCGGCTCCATCGGCTATTGCGACTGCAGGTGCCGGAATTGGAGGACAGATCGGGTTT
GAGTTGACCGACTTTGTTTTCATTCTCAACGATGCCGCTGCTGTTCGCACATTCTCGCAAGTGGGAACGCTGACG
CTGGGTGGCAATGTATCACTCGCTGCTGGACCGATTGGCCGAAATGCCGAGGCGGCTGGCGCAGCCAGTACGAAG
GGTGTTGCGGCCGTCTTCTCCTACTCAAAAACCAAAGGTCTTTTCGCTGGTGTCAGTCTGGAAGGTAGTATGCTG
GTGGAACGCAAGGATGCGAACGAGAAATTGTACCGCAGTCGTGTCTCCGCTAGCCAACTTCTCACAGGCAGCATT
CGTCCCCCACCGGCCGCCGATGCTCTGATGCGCGTGCTGAACTCCCGTGCATTCCAAGGAAATGCGCGGGCCTAC
GGTGATTCCATGTACAATGACATTCCTGTCTATGACGACAGCCATGACGACGTGGTCTGGGAGGGACGCAGGGGC
GATGCCTACGGTCAAGGTACCCAGCGTGGTCGGTCCAACACCAGTGAAAATGATTACAGCTACAGTGATAGGCCG
CGTCGCGCGAATACCTGGGCTGATGATGTCTATGATCGGCCTGCCTCGGGGCTTTCTCGTTCCGTGACAGCTCGG
GCCGCTGCTGACAATTCATTTGATGGCTATGGGCGCAACCGGAGCAACACCGCGCCATCTGAAGAGGAATATACC
TATTCGGATCGCAGACCTTCCCGTCCAACTGCTCCTAAACCGATCTTCCAGCAAAGGACTGGTGCAGCCCAATTG
CGGTCAGACCAAGCCGTTGCCCTTTTCACATTCGATGCGGATCAGGAGGGTGACCTTGGATTCAAGAAGGGTGAA
ATTATTACCATAATCAAGCGGACGGAGAAGGCGGAAGACTGGTGGACTGGTCGCATTGGTGATCGCGTGGGCATC
TTCCCAAGCAATTATGTTGAGGCTTAA
Gene >Pro_DTO377G3_2|g6731.t1
ATGGGTTTCGGCATCCATAATCCGCTGCCGGCGTCTATGACCAGTAGGTTTCATCGATACTCAAAGCCCACTTCC
CCGCAGTCGTGCGCGGCATATCCGGCTGACAGTGGATTCTCTCTCACCAGGCGAGTGCAAAAAGGCTGCAAAGAT
CTTGACATCGTTCGTTGATCCTAGGCAAGCATTCGGTCCCGACAAAGTCATTCCACCGGAGATTTTGGCCAATGC
AAAGGTAAGACATTCATAATGCCCCGGTTGGGAACATCCGTGACTAACAAATCTTTCCCCGTAGGGTCTCGCTAT
TCTCACGGTTTTGAAGGCCGGTTTCCTAGGCTCTGGTCGATTCGGCTCCGGTATCGTTGTCGCTCGTCTTGGCGA
TGGCTCCTGGTCGGCTCCATCGGCTATTGCGACTGCAGGTGCCGGAATTGGAGGACAGATCGGGTTTGAGTTGAC
CGACTTTGTTTTCATTCTCAACGATGCCGCTGCTGTTCGCACATTCTCGCAAGTGGGAACGCTGACGCTGGGTGG
CAATGTATCACTCGCTGCTGGACCGATTGGCCGAAATGCCGAGGCGGCTGGCGCAGCCAGTACGAAGGGTGTTGC
GGCCGTCTTCTCCTACTCAAAAACCAAAGGTCTTTTCGCTGGTGTCAGTCTGGAAGGTAGTATGCTGGTGGAACG
CAAGGATGCGAACGAGAAATTGTACCGCAGTCGTGTCTCCGCTAGCCAACTTCTCACAGGCAGCATTCGTCCCCC
ACCGGCCGCCGATGCTCTGATGCGCGTGCTGAACTCCCGTGCATTCCAAGGAAATGCGCGGGCCTACGGTGATTC
CATGTACAATGACATTCCTGTCTATGACGACAGCCATGACGACGTGGTCTGGGAGGGACGCAGGGGCGATGCCTA
CGGTCAAGGTACCCAGCGTGGTCGGTCCAACACCAGTGAAAATGATTACAGCTACAGTGATAGGCCGCGTCGCGC
GAATACCTGGGCTGATGATGTCTATGATCGGCCTGCCTCGGGGCTTTCTCGTTCCGTGACAGCTCGGGCCGCTGC
TGACAATTCATTTGATGGCTATGGGCGCAACCGGAGCAACACCGCGCCATCTGAAGAGGAATATACCTATTCGGA
TCGCAGACCTTCCCGTCCAACTGCTCCTAAACCGATCTTCCAGCAAAGGACTGGTGCAGCCCAATTGCGGTCAGA
CCAAGCCGTTGCCCTTTTCACATTCGATGCGGATCAGGAGGGTGACCTTGGATTCAAGAAGGGTGAAATTATTAC
CATAATCAAGCGGACGGAGAAGGCGGAAGACTGGTGGACTGGTCGCATTGGTGATCGCGTGGGCATCTTCCCAAG
GTAAGAACTTTTTCCTTTCACTTTCTAGAATTAATGGCTAATTCATTCGCAGCAATTATGTTGAGGCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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